RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 MICU3Q86XE3 530 aa19.31■□□□□ 0.68
SCN3B-202ENST00000392770 ZNF622Q969S3 477 aaKnown RBP eCLIP19.31■□□□□ 0.68
SCN3B-202ENST00000392770 MAP3K4Q9Y6R4 1608 aa19.31■□□□□ 0.68
SCN3B-202ENST00000392770 CYP7A1P22680 504 aa19.31■□□□□ 0.68
SCN3B-202ENST00000392770 TANGO6Q9C0B7 1094 aa19.31■□□□□ 0.68
SCN3B-202ENST00000392770 DHX8Q14562 1220 aaKnown RBP19.31■□□□□ 0.68
SCN3B-202ENST00000392770 CCDC96Q2M329 555 aa19.31■□□□□ 0.68
SCN3B-202ENST00000392770 NLRP3Q96P20 1036 aa19.31■□□□□ 0.68
SCN3B-202ENST00000392770 ARGLU1Q9NWB6 273 aaPredicted RBP19.31■□□□□ 0.68
SCN3B-202ENST00000392770 PDE4BQ07343 736 aa19.31■□□□□ 0.68
SCN3B-202ENST00000392770 BRF1Q92994 677 aa19.31■□□□□ 0.68
SCN3B-202ENST00000392770 LRRC2Q9BYS8 371 aa19.31■□□□□ 0.68
SCN3B-202ENST00000392770 CRNKL1Q9BZJ0 848 aaKnown RBP19.31■□□□□ 0.68
SCN3B-202ENST00000392770 NYXQ9GZU5 481 aa19.31■□□□□ 0.68
SCN3B-202ENST00000392770 SLC4A4Q9Y6R1 1079 aa19.31■□□□□ 0.68
SCN3B-202ENST00000392770 IARSP41252 1262 aaKnown RBP19.3■□□□□ 0.68
SCN3B-202ENST00000392770 NLRP5P59047 1200 aa19.3■□□□□ 0.68
SCN3B-202ENST00000392770 SNX21Q969T3 373 aa19.3■□□□□ 0.68
SCN3B-202ENST00000392770 ROBO2Q9HCK4 1378 aa19.3■□□□□ 0.68
SCN3B-202ENST00000392770 GSTO1P78417 241 aa19.3■□□□□ 0.68
SCN3B-202ENST00000392770 TCEANC2Q96MN5 208 aa19.3■□□□□ 0.68
SCN3B-202ENST00000392770 SLC9C2Q5TAH2 1124 aa19.29■□□□□ 0.68
SCN3B-202ENST00000392770 PLEKHF1Q96S99 279 aa19.29■□□□□ 0.68
SCN3B-202ENST00000392770 BMP2KQ9NSY1 1161 aaPredicted RBP19.29■□□□□ 0.68
SCN3B-202ENST00000392770 TFIP11Q9UBB9 837 aaKnown RBP19.29■□□□□ 0.68
SCN3B-202ENST00000392770 TSPY2A6NKD2 308 aa19.29■□□□□ 0.68
SCN3B-202ENST00000392770 ZNHIT6Q9NWK9 470 aaKnown RBP19.29■□□□□ 0.68
SCN3B-202ENST00000392770 SEC24BO95487 1268 aa19.29■□□□□ 0.68
SCN3B-202ENST00000392770 ORC3Q9UBD5 711 aaPredicted RBP19.29■□□□□ 0.68
SCN3B-202ENST00000392770 KIAA0232Q92628 1395 aa19.29■□□□□ 0.68
SCN3B-202ENST00000392770 RNF113AO15541 343 aaKnown RBP19.29■□□□□ 0.68
SCN3B-202ENST00000392770 Q6ZUG5 572 aa19.29■□□□□ 0.68
SCN3B-202ENST00000392770 IL27Q8NEV9 243 aa19.29■□□□□ 0.68
SCN3B-202ENST00000392770 CHMLP26374 656 aa19.28■□□□□ 0.68
SCN3B-202ENST00000392770 SLAIN2Q9P270 581 aa19.28■□□□□ 0.68
SCN3B-202ENST00000392770 KAT14Q9H8E8 782 aa19.28■□□□□ 0.68
SCN3B-202ENST00000392770 KLF18A0A0U1RQI7 1052 aa19.28■□□□□ 0.68
SCN3B-202ENST00000392770 EIF4A1P60842 406 aaKnown RBP19.28■□□□□ 0.68
SCN3B-202ENST00000392770 SLC26A6Q9BXS9 759 aa19.28■□□□□ 0.68
SCN3B-202ENST00000392770 AATKQ6ZMQ8 1374 aa19.28■□□□□ 0.68
SCN3B-202ENST00000392770 ZSCAN22P10073 491 aaPredicted RBP19.28■□□□□ 0.68
SCN3B-202ENST00000392770 KRT23Q9C075 422 aa19.28■□□□□ 0.68
SCN3B-202ENST00000392770 RNF123Q5XPI4 1314 aa19.27■□□□□ 0.68
SCN3B-202ENST00000392770 OTUD7AQ8TE49 926 aaPredicted RBP19.27■□□□□ 0.68
SCN3B-202ENST00000392770 RTCBQ9Y3I0 505 aaKnown RBP19.27■□□□□ 0.68
SCN3B-202ENST00000392770 NPHP4O75161 1426 aaPredicted RBP19.27■□□□□ 0.68
SCN3B-202ENST00000392770 ANO10Q9NW15 660 aa19.27■□□□□ 0.68
SCN3B-202ENST00000392770 HELBQ8NG08 1087 aaPredicted RBP19.27■□□□□ 0.68
SCN3B-202ENST00000392770 CDCA7Q9BWT1 371 aaPredicted RBP19.27■□□□□ 0.67
SCN3B-202ENST00000392770 FSIP1Q8NA03 581 aa19.26■□□□□ 0.67
SCN3B-202ENST00000392770 CKAP2LQ8IYA6 745 aa19.26■□□□□ 0.67
SCN3B-202ENST00000392770 RBM27Q9P2N5 1060 aaKnown RBP19.26■□□□□ 0.67
SCN3B-202ENST00000392770 KIF5BP33176 963 aa19.25■□□□□ 0.67
SCN3B-202ENST00000392770 WTAPQ15007 396 aa19.25■□□□□ 0.67
SCN3B-202ENST00000392770 LRRIQ1Q96JM4 1722 aa19.25■□□□□ 0.67
SCN3B-202ENST00000392770 CCDC194A0A1B0GVG4 234 aa19.25■□□□□ 0.67
SCN3B-202ENST00000392770 USP26Q9BXU7 913 aa19.25■□□□□ 0.67
SCN3B-202ENST00000392770 CREB3L3Q68CJ9 461 aa19.25■□□□□ 0.67
SCN3B-202ENST00000392770 FILIP1Q7Z7B0 1213 aa19.25■□□□□ 0.67
SCN3B-202ENST00000392770 NAA16Q6N069 864 aaPredicted RBP19.24■□□□□ 0.67
SCN3B-202ENST00000392770 ZGPATQ8N5A5 531 aaKnown RBP19.24■□□□□ 0.67
SCN3B-202ENST00000392770 FAM89AQ96GI7 184 aa19.24■□□□□ 0.67
SCN3B-202ENST00000392770 DCAF8L1A6NGE4 600 aa19.24■□□□□ 0.67
SCN3B-202ENST00000392770 ODF2Q5BJF6 829 aa19.24■□□□□ 0.67
SCN3B-202ENST00000392770 CNNM2Q9H8M5 875 aa19.24■□□□□ 0.67
SCN3B-202ENST00000392770 TPTE2Q6XPS3 522 aa19.24■□□□□ 0.67
SCN3B-202ENST00000392770 CTAGE5O15320 804 aa19.24■□□□□ 0.67
SCN3B-202ENST00000392770 DDX19AQ9NUU7 478 aaKnown RBP19.24■□□□□ 0.67
SCN3B-202ENST00000392770 SUCLG2Q96I99 432 aa19.24■□□□□ 0.67
SCN3B-202ENST00000392770 USP6P35125 1406 aa19.23■□□□□ 0.67
SCN3B-202ENST00000392770 RNF17Q9BXT8 1623 aaKnown RBP19.23■□□□□ 0.67
SCN3B-202ENST00000392770 A1BGP04217 495 aa19.23■□□□□ 0.67
SCN3B-202ENST00000392770 DEF6Q9H4E7 631 aa19.23■□□□□ 0.67
SCN3B-202ENST00000392770 MAGEB6P1A0A0J9YX57 407 aa19.23■□□□□ 0.67
SCN3B-202ENST00000392770 ZNF804AQ7Z570 1209 aa19.23■□□□□ 0.67
SCN3B-202ENST00000392770 SYCP1Q15431 976 aa19.23■□□□□ 0.67
SCN3B-202ENST00000392770 MAGEB6Q8N7X4 407 aa19.23■□□□□ 0.67
SCN3B-202ENST00000392770 KLHDC4Q8TBB5 520 aa19.23■□□□□ 0.67
SCN3B-202ENST00000392770 PNMA6EA0A0J9YXQ4 647 aa19.23■□□□□ 0.67
SCN3B-202ENST00000392770 CFAP100Q494V2 611 aa19.23■□□□□ 0.67
SCN3B-202ENST00000392770 TNNI3KQ59H18 835 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 IL17REQ8NFR9 667 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 FPGT-TNNI3KV9GXZ4 949 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 KIF24Q5T7B8 1368 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 CNNM3Q8NE01 707 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 ZSCAN16Q9H4T2 348 aaPredicted RBP19.22■□□□□ 0.67
SCN3B-202ENST00000392770 ZBTB43O43298 467 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 AK2P54819 239 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 UBE2HP62256 183 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 CCDC191Q8NCU4 936 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 RUFY1Q96T51 708 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 RAD50Q92878 1312 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 HLA-DOAP06340 250 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 NBPF7P0C2Y1 421 aaPredicted RBP19.22■□□□□ 0.67
SCN3B-202ENST00000392770 VAT1LQ9HCJ6 419 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 CNPY2Q9Y2B0 182 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 ABCC4O15439 1325 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 CCDC171Q6TFL3 1326 aa19.22■□□□□ 0.67
SCN3B-202ENST00000392770 GNPATO15228 680 aa19.21■□□□□ 0.67
SCN3B-202ENST00000392770 ITGA6P23229 1130 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms