RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 CCDC57Q2TAC2 916 aa22.31■■□□□ 1.16
STRADB-202ENST00000392249 ADCK5Q3MIX3 580 aa22.31■■□□□ 1.16
STRADB-202ENST00000392249 ZNF589Q86UQ0 364 aaPredicted RBP22.31■■□□□ 1.16
STRADB-202ENST00000392249 ZBTB38Q8NAP3 1195 aaPredicted RBP22.31■■□□□ 1.16
STRADB-202ENST00000392249 IL27Q8NEV9 243 aa22.31■■□□□ 1.16
STRADB-202ENST00000392249 MAP4K1Q92918 833 aa22.31■■□□□ 1.16
STRADB-202ENST00000392249 HAUS7Q99871 368 aa22.31■■□□□ 1.16
STRADB-202ENST00000392249 THRAP3Q9Y2W1 955 aaKnown RBP22.31■■□□□ 1.16
STRADB-202ENST00000392249 AK2P54819 239 aa22.3■■□□□ 1.16
STRADB-202ENST00000392249 JAKMIP1Q96N16 626 aaKnown RBP22.3■■□□□ 1.16
STRADB-202ENST00000392249 PTMSP20962 102 aa22.29■■□□□ 1.16
STRADB-202ENST00000392249 SYNE4Q8N205 404 aa22.29■■□□□ 1.16
STRADB-202ENST00000392249 KCNB2Q92953 911 aa22.29■■□□□ 1.16
STRADB-202ENST00000392249 GPR108Q9NPR9 543 aa22.29■■□□□ 1.16
STRADB-202ENST00000392249 ZNF609O15014 1411 aa22.29■■□□□ 1.16
STRADB-202ENST00000392249 CIAO1O76071 339 aa22.29■■□□□ 1.16
STRADB-202ENST00000392249 CREB3L3Q68CJ9 461 aa22.29■■□□□ 1.16
STRADB-202ENST00000392249 DDX46Q7L014 1031 aaKnown RBP22.29■■□□□ 1.16
STRADB-202ENST00000392249 ACSBG1Q96GR2 724 aa22.29■■□□□ 1.16
STRADB-202ENST00000392249 LARP6Q9BRS8 491 aaKnown RBP22.29■■□□□ 1.16
STRADB-202ENST00000392249 ZKSCAN1P17029 563 aaPredicted RBP22.28■■□□□ 1.16
STRADB-202ENST00000392249 NLRP10Q86W26 655 aa22.28■■□□□ 1.16
STRADB-202ENST00000392249 CHGBP05060 677 aa22.28■■□□□ 1.16
STRADB-202ENST00000392249 MCTP1Q6DN14 999 aa22.28■■□□□ 1.16
STRADB-202ENST00000392249 PLA2G12BQ9BX93 195 aa22.28■■□□□ 1.16
STRADB-202ENST00000392249 ANKRD36CQ5JPF3 1778 aa22.28■■□□□ 1.16
STRADB-202ENST00000392249 FOXD4L5Q5VV16 416 aaPredicted RBP22.27■■□□□ 1.16
STRADB-202ENST00000392249 RUFY3Q7L099 469 aa22.27■■□□□ 1.16
STRADB-202ENST00000392249 MARCH10Q8NA82 808 aaPredicted RBP22.27■■□□□ 1.16
STRADB-202ENST00000392249 FOXD4L4Q8WXT5 416 aaPredicted RBP22.27■■□□□ 1.16
STRADB-202ENST00000392249 SPATA31A5Q5VU36 1347 aa22.26■■□□□ 1.15
STRADB-202ENST00000392249 SPATA31A7Q8IWB4 1347 aa22.26■■□□□ 1.15
STRADB-202ENST00000392249 A0A1B0GUL7 405 aa22.26■■□□□ 1.15
STRADB-202ENST00000392249 SKOR2Q2VWA4 1001 aaPredicted RBP22.26■■□□□ 1.15
STRADB-202ENST00000392249 HSP90AB3PQ58FF7 597 aa22.26■■□□□ 1.15
STRADB-202ENST00000392249 TBC1D2BQ9UPU7 963 aa22.26■■□□□ 1.15
STRADB-202ENST00000392249 NUP98P52948 1817 aa22.26■■□□□ 1.15
STRADB-202ENST00000392249 RFX7Q2KHR2 1363 aa22.26■■□□□ 1.15
STRADB-202ENST00000392249 SLC27A2O14975 620 aa22.26■■□□□ 1.15
STRADB-202ENST00000392249 DZIP3Q86Y13 1208 aaKnown RBP22.26■■□□□ 1.15
STRADB-202ENST00000392249 TM6SF1Q9BZW5 370 aa22.26■■□□□ 1.15
STRADB-202ENST00000392249 ZSWIM6Q9HCJ5 1215 aa22.26■■□□□ 1.15
STRADB-202ENST00000392249 LIMCH1Q9UPQ0 1083 aa22.26■■□□□ 1.15
STRADB-202ENST00000392249 IL6STP40189 918 aaPredicted RBP22.25■■□□□ 1.15
STRADB-202ENST00000392249 CEP126Q9P2H0 1117 aa22.25■■□□□ 1.15
STRADB-202ENST00000392249 CYP46A1Q9Y6A2 500 aa22.25■■□□□ 1.15
STRADB-202ENST00000392249 CSF1RP07333 972 aa22.25■■□□□ 1.15
STRADB-202ENST00000392249 TAF7LQ5H9L4 462 aa22.25■■□□□ 1.15
STRADB-202ENST00000392249 PDRG1Q9NUG6 133 aa22.25■■□□□ 1.15
STRADB-202ENST00000392249 JCADQ9P266 1359 aa22.24■■□□□ 1.15
STRADB-202ENST00000392249 CDHR2Q9BYE9 1310 aa22.24■■□□□ 1.15
STRADB-202ENST00000392249 GOLIM4O00461 696 aa22.24■■□□□ 1.15
STRADB-202ENST00000392249 TAF5LO75529 589 aa22.24■■□□□ 1.15
STRADB-202ENST00000392249 IFIT5Q13325 482 aaKnown RBP22.24■■□□□ 1.15
STRADB-202ENST00000392249 KBTBD3Q8NAB2 608 aa22.24■■□□□ 1.15
STRADB-202ENST00000392249 PAG1Q9NWQ8 432 aa22.24■■□□□ 1.15
STRADB-202ENST00000392249 TOM1O60784 492 aa22.23■■□□□ 1.15
STRADB-202ENST00000392249 VPS53Q5VIR6 699 aa22.23■■□□□ 1.15
STRADB-202ENST00000392249 SEC62Q99442 399 aaKnown RBP22.23■■□□□ 1.15
STRADB-202ENST00000392249 NWD2Q9ULI1 1742 aa22.23■■□□□ 1.15
STRADB-202ENST00000392249 BRD1O95696 1058 aa22.23■■□□□ 1.15
STRADB-202ENST00000392249 RNF20Q5VTR2 975 aa22.23■■□□□ 1.15
STRADB-202ENST00000392249 CCDC129Q6ZRS4 1044 aa22.23■■□□□ 1.15
STRADB-202ENST00000392249 CHAMP1Q96JM3 812 aa22.23■■□□□ 1.15
STRADB-202ENST00000392249 SLIT2O94813 1529 aa22.23■■□□□ 1.15
STRADB-202ENST00000392249 TRMT112Q9UI30 125 aaKnown RBP22.22■■□□□ 1.15
STRADB-202ENST00000392249 TAF6LQ9Y6J9 622 aa22.22■■□□□ 1.15
STRADB-202ENST00000392249 RPAP1Q9BWH6 1393 aaPredicted RBP22.22■■□□□ 1.15
STRADB-202ENST00000392249 LARGE1O95461 756 aa22.22■■□□□ 1.15
STRADB-202ENST00000392249 ATP6V1AP38606 617 aa22.22■■□□□ 1.15
STRADB-202ENST00000392249 FBXO3Q9UK99 471 aa22.22■■□□□ 1.15
STRADB-202ENST00000392249 MYH3P11055 1940 aa22.21■■□□□ 1.15
STRADB-202ENST00000392249 GOLGA6L3A6NEY3 463 aa22.21■■□□□ 1.15
STRADB-202ENST00000392249 ERVV-1B6SEH8 477 aa22.21■■□□□ 1.15
STRADB-202ENST00000392249 IFIT1P09914 478 aaKnown RBP22.21■■□□□ 1.15
STRADB-202ENST00000392249 COL9A3Q14050 684 aaPredicted RBP22.21■■□□□ 1.15
STRADB-202ENST00000392249 TTLL11Q8NHH1 800 aa22.21■■□□□ 1.15
STRADB-202ENST00000392249 GREM2Q9H772 168 aa22.21■■□□□ 1.15
STRADB-202ENST00000392249 BRPF3Q9ULD4 1205 aa22.21■■□□□ 1.15
STRADB-202ENST00000392249 DDX49Q9Y6V7 483 aaKnown RBP22.21■■□□□ 1.15
STRADB-202ENST00000392249 PALLDQ8WX93 1383 aa22.21■■□□□ 1.15
STRADB-202ENST00000392249 IRS4O14654 1257 aaPredicted RBP22.21■■□□□ 1.15
STRADB-202ENST00000392249 CTSWP56202 376 aa22.21■■□□□ 1.15
STRADB-202ENST00000392249 MCMDC2Q4G0Z9 681 aa22.21■■□□□ 1.15
STRADB-202ENST00000392249 UBN2Q6ZU65 1347 aa22.2■■□□□ 1.14
STRADB-202ENST00000392249 ITGA6P23229 1130 aa22.2■■□□□ 1.14
STRADB-202ENST00000392249 L1TD1Q5T7N2 865 aaKnown RBP22.2■■□□□ 1.14
STRADB-202ENST00000392249 INTS5Q6P9B9 1019 aaKnown RBP22.2■■□□□ 1.14
STRADB-202ENST00000392249 BARGINQ6ZT62 677 aa22.2■■□□□ 1.14
STRADB-202ENST00000392249 LOC102724428A0A0B4J2F2 783 aa22.19■■□□□ 1.14
STRADB-202ENST00000392249 FSD2A1L4K1 749 aa22.19■■□□□ 1.14
STRADB-202ENST00000392249 PSMA5P28066 241 aa22.19■■□□□ 1.14
STRADB-202ENST00000392249 ADORA1P30542 326 aa22.19■■□□□ 1.14
STRADB-202ENST00000392249 CRKLP46109 303 aaKnown RBP22.19■■□□□ 1.14
STRADB-202ENST00000392249 SIK1P57059 783 aa22.19■■□□□ 1.14
STRADB-202ENST00000392249 SLFNL1Q499Z3 407 aa22.19■■□□□ 1.14
STRADB-202ENST00000392249 LMBRD1Q9NUN5 540 aa22.19■■□□□ 1.14
STRADB-202ENST00000392249 CCDC87Q9NVE4 849 aa22.19■■□□□ 1.14
STRADB-202ENST00000392249 AKAP2Q9Y2D5 859 aa22.19■■□□□ 1.14
STRADB-202ENST00000392249 EIF5P55010 431 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms