RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 CSF1RP07333 972 aa21.25■□□□□ 0.99
ERCC2-202ENST00000391942 GREM2Q9H772 168 aa21.25■□□□□ 0.99
ERCC2-202ENST00000391942 PPP4R2Q9NY27 417 aa21.25■□□□□ 0.99
ERCC2-202ENST00000391942 PTGER2P43116 358 aa21.24■□□□□ 0.99
ERCC2-202ENST00000391942 MTX1Q13505 466 aa21.24■□□□□ 0.99
ERCC2-202ENST00000391942 SGIP1Q9BQI5 828 aa21.24■□□□□ 0.99
ERCC2-202ENST00000391942 BRIP1Q9BX63 1249 aa21.24■□□□□ 0.99
ERCC2-202ENST00000391942 RIC1Q4ADV7 1423 aa21.23■□□□□ 0.99
ERCC2-202ENST00000391942 CCDC152Q4G0S7 254 aa21.23■□□□□ 0.99
ERCC2-202ENST00000391942 B4GALNT3Q6L9W6 998 aa21.23■□□□□ 0.99
ERCC2-202ENST00000391942 CCDC136Q96JN2 1154 aa21.23■□□□□ 0.99
ERCC2-202ENST00000391942 SPON1Q9HCB6 807 aa21.23■□□□□ 0.99
ERCC2-202ENST00000391942 IGHDP01880 384 aa21.22■□□□□ 0.99
ERCC2-202ENST00000391942 SF3B3Q15393 1217 aaKnown RBP21.22■□□□□ 0.99
ERCC2-202ENST00000391942 KLHDC4Q8TBB5 520 aa21.22■□□□□ 0.99
ERCC2-202ENST00000391942 SSH3Q8TE77 659 aa21.22■□□□□ 0.99
ERCC2-202ENST00000391942 SEC31BQ9NQW1 1179 aa21.22■□□□□ 0.99
ERCC2-202ENST00000391942 C10orf71Q711Q0 1435 aa21.21■□□□□ 0.99
ERCC2-202ENST00000391942 HMMRO75330 724 aa21.21■□□□□ 0.99
ERCC2-202ENST00000391942 ITGA6P23229 1130 aa21.21■□□□□ 0.99
ERCC2-202ENST00000391942 POLA2Q14181 598 aa21.21■□□□□ 0.99
ERCC2-202ENST00000391942 CCDC57Q2TAC2 916 aa21.21■□□□□ 0.99
ERCC2-202ENST00000391942 ZNF594Q96JF6 807 aaPredicted RBP21.21■□□□□ 0.99
ERCC2-202ENST00000391942 PA2G4Q9UQ80 394 aaKnown RBP21.21■□□□□ 0.99
ERCC2-202ENST00000391942 PDE6BP35913 854 aa21.2■□□□□ 0.98
ERCC2-202ENST00000391942 IFIT5Q13325 482 aaKnown RBP21.2■□□□□ 0.98
ERCC2-202ENST00000391942 KLHL34Q8N239 644 aa21.2■□□□□ 0.98
ERCC2-202ENST00000391942 RWDD1Q9H446 243 aaPredicted RBP21.2■□□□□ 0.98
ERCC2-202ENST00000391942 PPP1R1BQ9UD71 204 aaPredicted RBP21.2■□□□□ 0.98
ERCC2-202ENST00000391942 TAF1P21675 1872 aa21.2■□□□□ 0.98
ERCC2-202ENST00000391942 ANKRD18BA2A2Z9 1011 aa21.2■□□□□ 0.98
ERCC2-202ENST00000391942 RFX5P48382 616 aaPredicted RBP21.2■□□□□ 0.98
ERCC2-202ENST00000391942 HDAC1Q13547 482 aaPredicted RBP21.2■□□□□ 0.98
ERCC2-202ENST00000391942 RPGRQ92834 1020 aaKnown RBP21.2■□□□□ 0.98
ERCC2-202ENST00000391942 COL4A1P02462 1669 aa21.19■□□□□ 0.98
ERCC2-202ENST00000391942 COL11A2P13942 1736 aaPredicted RBP21.19■□□□□ 0.98
ERCC2-202ENST00000391942 CRY2Q49AN0 593 aa21.19■□□□□ 0.98
ERCC2-202ENST00000391942 TAF7LQ5H9L4 462 aa21.19■□□□□ 0.98
ERCC2-202ENST00000391942 C2CD5Q86YS7 1000 aa21.19■□□□□ 0.98
ERCC2-202ENST00000391942 SIL1Q9H173 461 aa21.19■□□□□ 0.98
ERCC2-202ENST00000391942 SPEF2Q9C093 1822 aa21.18■□□□□ 0.98
ERCC2-202ENST00000391942 KLRG2A4D1S0 409 aaPredicted RBP21.18■□□□□ 0.98
ERCC2-202ENST00000391942 CHRNA5P30532 468 aa21.18■□□□□ 0.98
ERCC2-202ENST00000391942 DDX46Q7L014 1031 aaKnown RBP21.18■□□□□ 0.98
ERCC2-202ENST00000391942 PTPN12Q05209 780 aaKnown RBP21.17■□□□□ 0.98
ERCC2-202ENST00000391942 EXOC6BQ9Y2D4 811 aa21.17■□□□□ 0.98
ERCC2-202ENST00000391942 RTL9Q8NET4 1388 aa21.17■□□□□ 0.98
ERCC2-202ENST00000391942 SURF6O75683 361 aaKnown RBP21.16■□□□□ 0.98
ERCC2-202ENST00000391942 RBM17Q96I25 401 aaKnown RBP21.16■□□□□ 0.98
ERCC2-202ENST00000391942 KIF13BQ9NQT8 1826 aa21.16■□□□□ 0.98
ERCC2-202ENST00000391942 H0YIN7 160 aa21.15■□□□□ 0.98
ERCC2-202ENST00000391942 APBB1O00213 710 aa21.15■□□□□ 0.98
ERCC2-202ENST00000391942 SRGNP10124 158 aa21.15■□□□□ 0.98
ERCC2-202ENST00000391942 CELF1Q92879 486 aaKnown RBP21.15■□□□□ 0.98
ERCC2-202ENST00000391942 NPR1P16066 1061 aa21.14■□□□□ 0.98
ERCC2-202ENST00000391942 ZNF622Q969S3 477 aaKnown RBP eCLIP21.14■□□□□ 0.98
ERCC2-202ENST00000391942 CDC5LQ99459 802 aaKnown RBP21.14■□□□□ 0.98
ERCC2-202ENST00000391942 PUS3Q9BZE2 481 aaKnown RBP21.14■□□□□ 0.98
ERCC2-202ENST00000391942 COPRSQ9NQ92 184 aa21.14■□□□□ 0.98
ERCC2-202ENST00000391942 OS9Q13438 667 aaPredicted RBP21.13■□□□□ 0.97
ERCC2-202ENST00000391942 LRRC24Q50LG9 513 aa21.13■□□□□ 0.97
ERCC2-202ENST00000391942 ANKRD18AQ8IVF6 992 aa21.13■□□□□ 0.97
ERCC2-202ENST00000391942 A0A0G2JLW4 131 aa21.13■□□□□ 0.97
ERCC2-202ENST00000391942 HOXA10P31260 410 aaPredicted RBP21.13■□□□□ 0.97
ERCC2-202ENST00000391942 IGHMBP2P38935 993 aaKnown RBP21.13■□□□□ 0.97
ERCC2-202ENST00000391942 LDHAL6AQ6ZMR3 332 aa21.13■□□□□ 0.97
ERCC2-202ENST00000391942 MASTLQ96GX5 879 aa21.13■□□□□ 0.97
ERCC2-202ENST00000391942 MPHOSPH8Q99549 860 aa21.13■□□□□ 0.97
ERCC2-202ENST00000391942 BCL11AQ9H165 835 aa21.13■□□□□ 0.97
ERCC2-202ENST00000391942 DCTPP1Q9H773 170 aa21.13■□□□□ 0.97
ERCC2-202ENST00000391942 CACNA1SQ13698 1873 aa21.12■□□□□ 0.97
ERCC2-202ENST00000391942 DPEP1P16444 411 aa21.12■□□□□ 0.97
ERCC2-202ENST00000391942 RPS8P62241 208 aaKnown RBP21.12■□□□□ 0.97
ERCC2-202ENST00000391942 G3BP1Q13283 466 aaKnown RBP eCLIP21.12■□□□□ 0.97
ERCC2-202ENST00000391942 GRAPQ13588 217 aa21.12■□□□□ 0.97
ERCC2-202ENST00000391942 GRAPLQ8TC17 118 aaPredicted RBP21.12■□□□□ 0.97
ERCC2-202ENST00000391942 CNNM1Q9NRU3 951 aa21.12■□□□□ 0.97
ERCC2-202ENST00000391942 KDM2BQ8NHM5 1336 aa21.11■□□□□ 0.97
ERCC2-202ENST00000391942 EYA2O00167 538 aa21.11■□□□□ 0.97
ERCC2-202ENST00000391942 SLC51AQ86UW1 340 aa21.11■□□□□ 0.97
ERCC2-202ENST00000391942 CRAMP1Q96RY5 1269 aa21.11■□□□□ 0.97
ERCC2-202ENST00000391942 NOP58Q9Y2X3 529 aaKnown RBP21.11■□□□□ 0.97
ERCC2-202ENST00000391942 LRP5O75197 1615 aa21.11■□□□□ 0.97
ERCC2-202ENST00000391942 KIAA1551Q9HCM1 1747 aa21.1■□□□□ 0.97
ERCC2-202ENST00000391942 STYK1Q6J9G0 422 aa21.1■□□□□ 0.97
ERCC2-202ENST00000391942 ATG9AQ7Z3C6 839 aa21.1■□□□□ 0.97
ERCC2-202ENST00000391942 PDZRN3Q9UPQ7 1066 aa21.1■□□□□ 0.97
ERCC2-202ENST00000391942 CD2APQ9Y5K6 639 aa21.1■□□□□ 0.97
ERCC2-202ENST00000391942 DLEC1Q9Y238 1755 aa21.09■□□□□ 0.97
ERCC2-202ENST00000391942 CENPQQ7L2Z9 268 aaPredicted RBP21.09■□□□□ 0.97
ERCC2-202ENST00000391942 GCC1Q96CN9 775 aa21.09■□□□□ 0.97
ERCC2-202ENST00000391942 WWC3Q9ULE0 1092 aa21.09■□□□□ 0.97
ERCC2-202ENST00000391942 TGFB2P61812 414 aa21.08■□□□□ 0.97
ERCC2-202ENST00000391942 HSP90AB4PQ58FF6 505 aa21.08■□□□□ 0.97
ERCC2-202ENST00000391942 SMC5Q8IY18 1101 aa21.08■□□□□ 0.97
ERCC2-202ENST00000391942 SMARCA5O60264 1052 aaPredicted RBP21.07■□□□□ 0.96
ERCC2-202ENST00000391942 CIAO1O76071 339 aa21.07■□□□□ 0.96
ERCC2-202ENST00000391942 KCNA3P22001 575 aa21.07■□□□□ 0.96
ERCC2-202ENST00000391942 ALDH1B1P30837 517 aa21.07■□□□□ 0.96
ERCC2-202ENST00000391942 NLGN2Q8NFZ4 835 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms