RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 TRIM11Q96F44 468 aa2.7□□□□□ -1.98
SNORD28B-201ENST00000390993 SPACA7Q96KW9 195 aa2.7□□□□□ -1.98
SNORD28B-201ENST00000390993 GSX2Q9BZM3 304 aa2.7□□□□□ -1.98
SNORD28B-201ENST00000390993 KLK14Q9P0G3 267 aa2.7□□□□□ -1.98
SNORD28B-201ENST00000390993 FRRS1LQ9P0K9 344 aa2.7□□□□□ -1.98
SNORD28B-201ENST00000390993 USP21Q9UK80 565 aa2.7□□□□□ -1.98
SNORD28B-201ENST00000390993 RTCBQ9Y3I0 505 aaKnown RBP2.7□□□□□ -1.98
SNORD28B-201ENST00000390993 LGR5O75473 907 aa2.69□□□□□ -1.98
SNORD28B-201ENST00000390993 ATG7O95352 703 aa2.69□□□□□ -1.98
SNORD28B-201ENST00000390993 HOXB4P17483 251 aaPredicted RBP2.69□□□□□ -1.98
SNORD28B-201ENST00000390993 INPP5BP32019 993 aa2.69□□□□□ -1.98
SNORD28B-201ENST00000390993 PLAURQ03405 335 aa2.69□□□□□ -1.98
SNORD28B-201ENST00000390993 DOC2BQ14184 412 aa2.69□□□□□ -1.98
SNORD28B-201ENST00000390993 TTC39BQ5VTQ0 682 aaPredicted RBP2.69□□□□□ -1.98
SNORD28B-201ENST00000390993 ERICH6Q7L0X2 663 aa2.69□□□□□ -1.98
SNORD28B-201ENST00000390993 RGL4Q8IZJ4 473 aa2.69□□□□□ -1.98
SNORD28B-201ENST00000390993 PRIMPOLQ96LW4 560 aa2.69□□□□□ -1.98
SNORD28B-201ENST00000390993 ARXQ96QS3 562 aa2.69□□□□□ -1.98
SNORD28B-201ENST00000390993 MUC3BQ9H195 1237 aa2.69□□□□□ -1.98
SNORD28B-201ENST00000390993 QTRT2Q9H974 415 aaKnown RBP2.69□□□□□ -1.98
SNORD28B-201ENST00000390993 SRA1Q9HD15 236 aaKnown RBP2.69□□□□□ -1.98
SNORD28B-201ENST00000390993 A0A0A0MRY4 1105 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 SCO2A0A1W2PP80 73 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 UBAP1LF5GYI3 381 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 FAM229AH3BQW9 127 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 SASH3O75995 380 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 EGFRP00533 1210 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 NID1P14543 1247 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 SOX18P35713 384 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 CHRNA4P43681 627 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 GPLD1P80108 840 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 HYAL2Q12891 473 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 FAM117BQ6P1L5 589 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 MAP4K3Q8IVH8 894 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 DMRTC2Q8IXT2 367 aaPredicted RBP2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 TRPM4Q8TD43 1214 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 TTC9Q92623 222 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 MDFIQ99750 246 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 SMG9Q9H0W8 520 aaKnown RBP2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 SEMA6BQ9H3T3 888 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 TLR7Q9NYK1 1049 aaKnown RBP2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 DMGDHQ9UI17 866 aaKnown RBP2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 STARD13Q9Y3M8 1113 aa2.68□□□□□ -1.98
SNORD28B-201ENST00000390993 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 LOC102724428A0A0B4J2F2 783 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 PPP1R15AO75807 674 aaPredicted RBP2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 SMNDC1O75940 238 aaKnown RBP eCLIP2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 ATP2B4P23634 1241 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 TARSP26639 723 aaKnown RBP2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 SCNN1AP37088 669 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 ZAP70P43403 619 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 AFF1P51825 1210 aaKnown RBP2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 SIK1P57059 783 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 MLLT1Q03111 559 aaPredicted RBP2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 FKBP5Q13451 457 aaPredicted RBP2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 AAMPQ13685 434 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 GRIK4Q16099 956 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 COX20Q5RI15 118 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 MSL1Q68DK7 614 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 B4GALNT3Q6L9W6 998 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 ALKBH2Q6NS38 261 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 IGF2-ASQ6U949 168 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 C20orf204Q6ZNR8 217 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 C8orf86Q6ZUL3 223 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 TXNRD3Q86VQ6 643 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 NLRP13Q86W25 1043 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 FMR1NBQ8N0W7 255 aaPredicted RBP2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 CLP1Q92989 425 aaKnown RBP2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 PLD4Q96BZ4 506 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 LENG1Q96BZ8 264 aaPredicted RBP2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 MKNK1Q9BUB5 465 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 CXXC1Q9P0U4 656 aaPredicted RBP2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 STIM2Q9P246 746 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 BCS1LQ9Y276 419 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 GTF3C3Q9Y5Q9 886 aa2.67□□□□□ -1.98
SNORD28B-201ENST00000390993 ITGB2P05107 769 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 CABP4P57796 275 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 PDE4CQ08493 712 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 ADGRE1Q14246 886 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 PERM1Q5SV97 790 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 ZMYM1Q5SVZ6 1142 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 TMEM164Q5U3C3 297 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 GDF6Q6KF10 455 aaPredicted RBP2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 HFE2Q6ZVN8 426 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 FBXO11Q86XK2 927 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 IL22RA1Q8N6P7 574 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 STK32AQ8WU08 396 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 PMEPA1Q969W9 287 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 TP53INP1Q96A56 240 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 LPIN3Q9BQK8 851 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 MRPL18Q9H0U6 180 aaKnown RBP2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 HCN2Q9UL51 889 aa2.66□□□□□ -1.98
SNORD28B-201ENST00000390993 OPLAHO14841 1288 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 EIF4EBP3O60516 100 aaPredicted RBP2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 MMP20O60882 483 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 H2AFB1P0C5Y9 115 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 H2AFB2P0C5Z0 115 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 ARL4DP49703 201 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 MBTPS1Q14703 1052 aa2.65□□□□□ -1.99
SNORD28B-201ENST00000390993 NAA30Q147X3 362 aaPredicted RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms