RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 COL26A1Q96A83 441 aa0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 CHFRQ96EP1 664 aa0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 MISP3Q96FF7 219 aa0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 MFSD14AQ96MC6 490 aa0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 SLC26A8Q96RN1 970 aa0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 CEP89Q96ST8 783 aa0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 FAM83CQ9BQN1 747 aa0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 INO80BQ9C086 356 aaPredicted RBP0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 ADAM19Q9H013 955 aa0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 VPS11Q9H270 941 aa0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 CRISPLD1Q9H336 500 aa0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 NSUN3Q9H649 340 aaKnown RBP0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 RUBCNLQ9H714 662 aa0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 JPH1Q9HDC5 661 aaPredicted RBP0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 DCP1AQ9NPI6 582 aaPredicted RBP0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 NPDC1Q9NQX5 325 aaPredicted RBP0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 SEMA3GQ9NS98 782 aa0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 EVA1BQ9NVM1 165 aa0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 SMPD4Q9NXE4 827 aa0.16□□□□□ -2.38
TRAJ28-201ENST00000390509 A0A0A6YYK5 440 aaPredicted RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 DCDC2BA2VCK2 349 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 GRXCR2A6NFK2 248 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ETV2O00321 342 aaPredicted RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 KHNYNO15037 678 aaKnown RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 GPR37O15354 613 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ALX3O95076 343 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 OATP04181 439 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 FAM157BP0CG42 384 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 MAPTP10636 758 aaKnown RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 MSX1P28360 303 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 GTF2E1P29083 439 aaPredicted RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 CTHP32929 405 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 AFMP43652 599 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 AFF1P51825 1210 aaKnown RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 KRTAP10-8P60410 259 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 USP46P62068 366 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 TNP2Q05952 138 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 CAMK2BQ13554 666 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 FHL2Q14192 279 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 KRTAP13-3Q3SY46 172 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ZNF385BQ569K4 471 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 TMEM67Q5HYA8 995 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 INTS6LQ5JSJ4 861 aaKnown RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 GNASQ5JWF2 1037 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 BSPRYQ5W0U4 402 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 KRTAP5-7Q6L8G8 165 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ZNF574Q6ZN55 896 aaPredicted RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 BEND4Q6ZU67 534 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 NLRP8Q86W28 1048 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 WFDC8Q8IUA0 241 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 MAP4K3Q8IVH8 894 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 FAM20CQ8IXL6 584 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ZDHHC14Q8IZN3 488 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ARMC10Q8N2F6 343 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 FBXL6Q8N531 539 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 TTC9BQ8N6N2 239 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ZBTB8BQ8NAP8 495 aaPredicted RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 KDF1Q8NAX2 398 aaPredicted RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ZNF784Q8NCA9 323 aaPredicted RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 BAHD1Q8TBE0 780 aaPredicted RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 USP33Q8TEY7 942 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ZG16BQ96DA0 208 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 SLC10A4Q96EP9 437 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 WBP1Q96G27 269 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 FAM46AQ96IP4 442 aaKnown RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 NLRP3Q96P20 1036 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 KCTD15Q96SI1 283 aaPredicted RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 DIRC2Q96SL1 478 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ZNF747Q9BV97 191 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 C1QTNF3Q9BXJ4 246 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ADGRE3Q9BY15 652 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 KRTAP3-1Q9BYR8 98 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ZCCHC2Q9C0B9 1178 aaKnown RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 GRIP2Q9C0E4 1043 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 VPS33BQ9H267 617 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ADAM7Q9H2U9 754 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 KCNF1Q9H3M0 494 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 SRA1Q9HD15 236 aaKnown RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 RYDENQ9NUL5 291 aaKnown RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 CRIM1Q9NZV1 1036 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ADAMTS6Q9UKP5 1117 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 CDV3Q9UKY7 258 aaKnown RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 ATP1B4Q9UN42 357 aaPredicted RBP0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 HIF3AQ9Y2N7 669 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 HS3ST3A1Q9Y663 406 aa0.15□□□□□ -2.39
TRAJ28-201ENST00000390509 FCGBPQ9Y6R7 5405 aaPredicted RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 MAGEB6P1A0A0J9YX57 407 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 A0A1W2PRU2 124 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 SLC22A31A6NKX4 558 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 ESPNB1AK53 854 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 SART1O43290 800 aaKnown RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 LILRA1O75019 489 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 ADAM11O75078 769 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 KDM4AO75164 1064 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 SEMA7AO75326 666 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 DEAF1O75398 565 aaPredicted RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 RGS9O75916 674 aaPredicted RBP0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 ITGB3P05106 788 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 F13BP05160 661 aa0.14□□□□□ -2.39
TRAJ28-201ENST00000390509 BMP3P12645 472 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms