RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 PARP3Q9Y6F1 533 aa11.23□□□□□ -0.61
TRAV17-201ENST00000390445 SOS1Q07889 1333 aaPredicted RBP11.23□□□□□ -0.61
TRAV17-201ENST00000390445 LAMB4A4D0S4 1761 aa11.23□□□□□ -0.61
TRAV17-201ENST00000390445 SENP3-EIF4A1A0A087X0R7 540 aa11.22□□□□□ -0.61
TRAV17-201ENST00000390445 COL15A1P39059 1388 aa11.22□□□□□ -0.61
TRAV17-201ENST00000390445 MDM2Q00987 491 aaPredicted RBP11.22□□□□□ -0.61
TRAV17-201ENST00000390445 NEUROD2Q15784 382 aa11.22□□□□□ -0.61
TRAV17-201ENST00000390445 USPL1Q5W0Q7 1092 aa11.22□□□□□ -0.61
TRAV17-201ENST00000390445 KDM3BQ7LBC6 1761 aa11.22□□□□□ -0.61
TRAV17-201ENST00000390445 IL17REQ8NFR9 667 aa11.22□□□□□ -0.61
TRAV17-201ENST00000390445 PHACTR3Q96KR7 559 aa11.22□□□□□ -0.61
TRAV17-201ENST00000390445 DICER1Q9UPY3 1922 aaKnown RBP11.22□□□□□ -0.61
TRAV17-201ENST00000390445 BCS1LQ9Y276 419 aa11.22□□□□□ -0.61
TRAV17-201ENST00000390445 NUP98P52948 1817 aa11.21□□□□□ -0.61
TRAV17-201ENST00000390445 TIAM2Q8IVF5 1701 aa11.21□□□□□ -0.61
TRAV17-201ENST00000390445 PPP2R1AP30153 589 aa11.21□□□□□ -0.61
TRAV17-201ENST00000390445 PRKAR2BP31323 418 aa11.21□□□□□ -0.61
TRAV17-201ENST00000390445 TGFB2P61812 414 aa11.21□□□□□ -0.61
TRAV17-201ENST00000390445 MMRN1Q13201 1228 aa11.21□□□□□ -0.61
TRAV17-201ENST00000390445 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.61
TRAV17-201ENST00000390445 ARFGEF2Q9Y6D5 1785 aa11.21□□□□□ -0.62
TRAV17-201ENST00000390445 GNAT3A8MTJ3 354 aa11.2□□□□□ -0.62
TRAV17-201ENST00000390445 POLRMTO00411 1230 aaKnown RBP11.2□□□□□ -0.62
TRAV17-201ENST00000390445 KCNA3P22001 575 aa11.2□□□□□ -0.62
TRAV17-201ENST00000390445 CANXP27824 592 aaKnown RBP11.2□□□□□ -0.62
TRAV17-201ENST00000390445 GAS2L2Q8NHY3 880 aa11.2□□□□□ -0.62
TRAV17-201ENST00000390445 ZNF496Q96IT1 587 aaPredicted RBP11.2□□□□□ -0.62
TRAV17-201ENST00000390445 TMUB1Q9BVT8 246 aa11.2□□□□□ -0.62
TRAV17-201ENST00000390445 FER1L6Q2WGJ9 1857 aa11.2□□□□□ -0.62
TRAV17-201ENST00000390445 KCNQ3O43525 872 aa11.19□□□□□ -0.62
TRAV17-201ENST00000390445 ZPR1O75312 459 aa11.19□□□□□ -0.62
TRAV17-201ENST00000390445 TM4SF1P30408 202 aa11.19□□□□□ -0.62
TRAV17-201ENST00000390445 CHRNA5P30532 468 aa11.19□□□□□ -0.62
TRAV17-201ENST00000390445 TEFQ10587 303 aa11.19□□□□□ -0.62
TRAV17-201ENST00000390445 TTLL12Q14166 644 aaPredicted RBP11.19□□□□□ -0.62
TRAV17-201ENST00000390445 TTC5Q8N0Z6 440 aa11.19□□□□□ -0.62
TRAV17-201ENST00000390445 CFAP53Q96M91 514 aa11.19□□□□□ -0.62
TRAV17-201ENST00000390445 NBPF3Q9H094 633 aa11.19□□□□□ -0.62
TRAV17-201ENST00000390445 SLX4Q8IY92 1834 aa11.19□□□□□ -0.62
TRAV17-201ENST00000390445 CEMIPQ8WUJ3 1361 aa11.18□□□□□ -0.62
TRAV17-201ENST00000390445 HEG1Q9ULI3 1381 aa11.18□□□□□ -0.62
TRAV17-201ENST00000390445 DNAJB2P25686 324 aa11.18□□□□□ -0.62
TRAV17-201ENST00000390445 NFIXQ14938 502 aa11.18□□□□□ -0.62
TRAV17-201ENST00000390445 ZNF790Q6PG37 636 aa11.18□□□□□ -0.62
TRAV17-201ENST00000390445 NARFQ9UHQ1 456 aa11.18□□□□□ -0.62
TRAV17-201ENST00000390445 CARMIL3Q8ND23 1372 aa11.17□□□□□ -0.62
TRAV17-201ENST00000390445 U2AF1L5P0DN76 240 aaPredicted RBP11.17□□□□□ -0.62
TRAV17-201ENST00000390445 U2AF1Q01081 240 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRAV17-201ENST00000390445 GIGYF2Q6Y7W6 1299 aaKnown RBP11.17□□□□□ -0.62
TRAV17-201ENST00000390445 ARHGAP27Q6ZUM4 889 aa11.17□□□□□ -0.62
TRAV17-201ENST00000390445 MRPL50Q8N5N7 158 aaKnown RBP11.17□□□□□ -0.62
TRAV17-201ENST00000390445 KDM4CQ9H3R0 1056 aa11.17□□□□□ -0.62
TRAV17-201ENST00000390445 TMEM134Q9H6X4 195 aa11.17□□□□□ -0.62
TRAV17-201ENST00000390445 TNRC6CQ9HCJ0 1690 aaKnown RBP11.17□□□□□ -0.62
TRAV17-201ENST00000390445 PRAMEF22A3QJZ6 481 aa11.16□□□□□ -0.62
TRAV17-201ENST00000390445 CLCN1P35523 988 aa11.16□□□□□ -0.62
TRAV17-201ENST00000390445 EIF5P55010 431 aaKnown RBP11.16□□□□□ -0.62
TRAV17-201ENST00000390445 DCTN1Q14203 1278 aa11.16□□□□□ -0.62
TRAV17-201ENST00000390445 BICDL1Q6ZP65 573 aa11.16□□□□□ -0.62
TRAV17-201ENST00000390445 MCM10Q7L590 875 aa11.16□□□□□ -0.62
TRAV17-201ENST00000390445 LAPTM4BQ86VI4 370 aa11.16□□□□□ -0.62
TRAV17-201ENST00000390445 GPCPD1Q9NPB8 672 aa11.16□□□□□ -0.62
TRAV17-201ENST00000390445 ZNF330Q9Y3S2 320 aaPredicted RBP11.16□□□□□ -0.62
TRAV17-201ENST00000390445 CEP350Q5VT06 3117 aa11.16□□□□□ -0.62
TRAV17-201ENST00000390445 BTBD11A6QL63 1104 aa11.15□□□□□ -0.62
TRAV17-201ENST00000390445 A1BGP04217 495 aa11.15□□□□□ -0.62
TRAV17-201ENST00000390445 PIP4K2AP48426 406 aaPredicted RBP11.15□□□□□ -0.62
TRAV17-201ENST00000390445 PIM2Q9P1W9 311 aa11.15□□□□□ -0.62
TRAV17-201ENST00000390445 NUDCQ9Y266 331 aa11.15□□□□□ -0.62
TRAV17-201ENST00000390445 STARD3NLO95772 234 aa11.14□□□□□ -0.63
TRAV17-201ENST00000390445 SERPINB2P05120 415 aa11.14□□□□□ -0.63
TRAV17-201ENST00000390445 DALRD3Q5D0E6 543 aaKnown RBP11.14□□□□□ -0.63
TRAV17-201ENST00000390445 SWT1Q5T5J6 900 aaKnown RBP11.14□□□□□ -0.63
TRAV17-201ENST00000390445 TBC1D9BQ66K14 1250 aa11.14□□□□□ -0.63
TRAV17-201ENST00000390445 CCDC24Q8N4L8 307 aa11.14□□□□□ -0.63
TRAV17-201ENST00000390445 ZFRQ96KR1 1074 aaKnown RBP11.14□□□□□ -0.63
TRAV17-201ENST00000390445 FMNL2Q96PY5 1086 aa11.14□□□□□ -0.63
TRAV17-201ENST00000390445 TBC1D2BQ9UPU7 963 aa11.14□□□□□ -0.63
TRAV17-201ENST00000390445 WDR90Q96KV7 1748 aa11.13□□□□□ -0.63
TRAV17-201ENST00000390445 MS4A1P11836 297 aa11.13□□□□□ -0.63
TRAV17-201ENST00000390445 DAXXQ9UER7 740 aaPredicted RBP11.13□□□□□ -0.63
TRAV17-201ENST00000390445 USP16Q9Y5T5 823 aa11.13□□□□□ -0.63
TRAV17-201ENST00000390445 RASSF7Q02833 373 aa11.12□□□□□ -0.63
TRAV17-201ENST00000390445 C9orf131Q5VYM1 1079 aa11.12□□□□□ -0.63
TRAV17-201ENST00000390445 SAMD7Q7Z3H4 446 aa11.12□□□□□ -0.63
TRAV17-201ENST00000390445 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
TRAV17-201ENST00000390445 ANKRD36CQ5JPF3 1778 aa11.12□□□□□ -0.63
TRAV17-201ENST00000390445 A0A087WZG4 1122 aa11.11□□□□□ -0.63
TRAV17-201ENST00000390445 IL6STP40189 918 aaPredicted RBP11.11□□□□□ -0.63
TRAV17-201ENST00000390445 RTF1Q92541 710 aaKnown RBP11.11□□□□□ -0.63
TRAV17-201ENST00000390445 TEX13AQ9BXU3 409 aaPredicted RBP11.11□□□□□ -0.63
TRAV17-201ENST00000390445 NMRK2Q9NPI5 230 aa11.11□□□□□ -0.63
TRAV17-201ENST00000390445 MIS18AQ9NYP9 233 aa11.11□□□□□ -0.63
TRAV17-201ENST00000390445 CAMTA2O94983 1202 aa11.1□□□□□ -0.63
TRAV17-201ENST00000390445 PRELPP51888 382 aa11.1□□□□□ -0.63
TRAV17-201ENST00000390445 C2CD5Q86YS7 1000 aa11.1□□□□□ -0.63
TRAV17-201ENST00000390445 RNF181Q9P0P0 153 aa11.1□□□□□ -0.63
TRAV17-201ENST00000390445 LAMB2P55268 1798 aa11.1□□□□□ -0.63
TRAV17-201ENST00000390445 TAF1P21675 1872 aa11.09□□□□□ -0.63
TRAV17-201ENST00000390445 SSTR3P32745 418 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms