RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 NEUROD6Q96NK8 337 aa21.95■■□□□ 1.1
ACTN4-202ENST00000390009 PUS3Q9BZE2 481 aaKnown RBP21.95■■□□□ 1.1
ACTN4-202ENST00000390009 CICQ96RK0 1608 aaPredicted RBP21.95■■□□□ 1.1
ACTN4-202ENST00000390009 GBP4Q96PP9 640 aa21.94■■□□□ 1.1
ACTN4-202ENST00000390009 HAUS7Q99871 368 aa21.94■■□□□ 1.1
ACTN4-202ENST00000390009 RREB1Q92766 1687 aa21.94■■□□□ 1.1
ACTN4-202ENST00000390009 LOC102724428A0A0B4J2F2 783 aa21.94■■□□□ 1.1
ACTN4-202ENST00000390009 DDX11L8A8MPP1 907 aa21.94■■□□□ 1.1
ACTN4-202ENST00000390009 SSFA2P28290 1259 aa21.94■■□□□ 1.1
ACTN4-202ENST00000390009 SIK1P57059 783 aa21.94■■□□□ 1.1
ACTN4-202ENST00000390009 SYNE4Q8N205 404 aa21.94■■□□□ 1.1
ACTN4-202ENST00000390009 DNAJC2Q99543 621 aaKnown RBP21.94■■□□□ 1.1
ACTN4-202ENST00000390009 TIMM10P62072 90 aa21.93■■□□□ 1.1
ACTN4-202ENST00000390009 INTS5Q6P9B9 1019 aaKnown RBP21.93■■□□□ 1.1
ACTN4-202ENST00000390009 C8orf37Q96NL8 207 aa21.93■■□□□ 1.1
ACTN4-202ENST00000390009 CCDC85AQ96PX6 553 aaPredicted RBP21.93■■□□□ 1.1
ACTN4-202ENST00000390009 CCDC87Q9NVE4 849 aa21.93■■□□□ 1.1
ACTN4-202ENST00000390009 FBXO3Q9UK99 471 aa21.93■■□□□ 1.1
ACTN4-202ENST00000390009 NDUFB9Q9Y6M9 179 aa21.93■■□□□ 1.1
ACTN4-202ENST00000390009 MYH14Q7Z406 1995 aaKnown RBP21.93■■□□□ 1.1
ACTN4-202ENST00000390009 MED23Q9ULK4 1368 aa21.93■■□□□ 1.1
ACTN4-202ENST00000390009 EIF5P55010 431 aaKnown RBP21.92■■□□□ 1.1
ACTN4-202ENST00000390009 NUCB2P80303 420 aa21.92■■□□□ 1.1
ACTN4-202ENST00000390009 RFX7Q2KHR2 1363 aa21.92■■□□□ 1.1
ACTN4-202ENST00000390009 JCADQ9P266 1359 aa21.92■■□□□ 1.1
ACTN4-202ENST00000390009 CRKLP46109 303 aaKnown RBP21.92■■□□□ 1.1
ACTN4-202ENST00000390009 IFIT5Q13325 482 aaKnown RBP21.92■■□□□ 1.1
ACTN4-202ENST00000390009 FAM98CQ17RN3 349 aaKnown RBP21.92■■□□□ 1.1
ACTN4-202ENST00000390009 PRPF40BQ6NWY9 871 aaKnown RBP21.92■■□□□ 1.1
ACTN4-202ENST00000390009 NOL8Q76FK4 1167 aaKnown RBP21.92■■□□□ 1.1
ACTN4-202ENST00000390009 NGLY1Q96IV0 654 aa21.92■■□□□ 1.1
ACTN4-202ENST00000390009 BCL9LQ86UU0 1499 aa21.92■■□□□ 1.1
ACTN4-202ENST00000390009 PALLDQ8WX93 1383 aa21.92■■□□□ 1.1
ACTN4-202ENST00000390009 CUL4AQ13619 759 aa21.91■■□□□ 1.1
ACTN4-202ENST00000390009 NECTIN1Q15223 517 aa21.91■■□□□ 1.1
ACTN4-202ENST00000390009 MAP4K1Q92918 833 aa21.91■■□□□ 1.1
ACTN4-202ENST00000390009 CEP126Q9P2H0 1117 aa21.91■■□□□ 1.1
ACTN4-202ENST00000390009 A0A1B0GUL7 405 aa21.91■■□□□ 1.1
ACTN4-202ENST00000390009 KCNB2Q92953 911 aa21.91■■□□□ 1.1
ACTN4-202ENST00000390009 TRMT112Q9UI30 125 aaKnown RBP21.91■■□□□ 1.1
ACTN4-202ENST00000390009 ITPK1Q13572 414 aa21.9■■□□□ 1.1
ACTN4-202ENST00000390009 VPS72Q15906 364 aa21.9■■□□□ 1.1
ACTN4-202ENST00000390009 TAF7LQ5H9L4 462 aa21.9■■□□□ 1.1
ACTN4-202ENST00000390009 RBM8AQ9Y5S9 174 aaKnown RBP21.9■■□□□ 1.1
ACTN4-202ENST00000390009 UBN2Q6ZU65 1347 aa21.9■■□□□ 1.1
ACTN4-202ENST00000390009 CYP2E1P05181 493 aaPredicted RBP21.89■■□□□ 1.1
ACTN4-202ENST00000390009 ZNF34Q8IZ26 560 aa21.89■■□□□ 1.1
ACTN4-202ENST00000390009 TTLL11Q8NHH1 800 aa21.89■■□□□ 1.1
ACTN4-202ENST00000390009 TTC14Q96N46 770 aa21.89■■□□□ 1.1
ACTN4-202ENST00000390009 IRS4O14654 1257 aaPredicted RBP21.89■■□□□ 1.09
ACTN4-202ENST00000390009 KCNQ2O43526 872 aa21.89■■□□□ 1.09
ACTN4-202ENST00000390009 CTSWP56202 376 aa21.89■■□□□ 1.09
ACTN4-202ENST00000390009 DDX46Q7L014 1031 aaKnown RBP21.89■■□□□ 1.09
ACTN4-202ENST00000390009 ZNF589Q86UQ0 364 aaPredicted RBP21.89■■□□□ 1.09
ACTN4-202ENST00000390009 KCNJ4P48050 445 aa21.88■■□□□ 1.09
ACTN4-202ENST00000390009 PKP1Q13835 747 aa21.88■■□□□ 1.09
ACTN4-202ENST00000390009 CLEC17AQ6ZS10 378 aa21.88■■□□□ 1.09
ACTN4-202ENST00000390009 COL5A3P25940 1745 aaPredicted RBP21.88■■□□□ 1.09
ACTN4-202ENST00000390009 CASTP20810 708 aaKnown RBP21.88■■□□□ 1.09
ACTN4-202ENST00000390009 KBTBD3Q8NAB2 608 aa21.88■■□□□ 1.09
ACTN4-202ENST00000390009 SMARCC1Q92922 1105 aaPredicted RBP21.88■■□□□ 1.09
ACTN4-202ENST00000390009 INTS4Q96HW7 963 aaKnown RBP21.88■■□□□ 1.09
ACTN4-202ENST00000390009 GREM2Q9H772 168 aa21.88■■□□□ 1.09
ACTN4-202ENST00000390009 SPEF2Q9C093 1822 aa21.87■■□□□ 1.09
ACTN4-202ENST00000390009 TRAK2O60296 914 aa21.87■■□□□ 1.09
ACTN4-202ENST00000390009 ZKSCAN1P17029 563 aaPredicted RBP21.87■■□□□ 1.09
ACTN4-202ENST00000390009 ITGA6P23229 1130 aa21.87■■□□□ 1.09
ACTN4-202ENST00000390009 CREB3L3Q68CJ9 461 aa21.87■■□□□ 1.09
ACTN4-202ENST00000390009 AKAP2Q9Y2D5 859 aa21.87■■□□□ 1.09
ACTN4-202ENST00000390009 ADCK5Q3MIX3 580 aa21.86■■□□□ 1.09
ACTN4-202ENST00000390009 TM6SF1Q9BZW5 370 aa21.86■■□□□ 1.09
ACTN4-202ENST00000390009 PAG1Q9NWQ8 432 aa21.86■■□□□ 1.09
ACTN4-202ENST00000390009 PDE8AO60658 829 aa21.86■■□□□ 1.09
ACTN4-202ENST00000390009 JAKMIP1Q96N16 626 aaKnown RBP21.86■■□□□ 1.09
ACTN4-202ENST00000390009 ZNF831Q5JPB2 1677 aa21.85■■□□□ 1.09
ACTN4-202ENST00000390009 GOLIM4O00461 696 aa21.85■■□□□ 1.09
ACTN4-202ENST00000390009 AK2P54819 239 aa21.85■■□□□ 1.09
ACTN4-202ENST00000390009 ANKRD18BA2A2Z9 1011 aa21.85■■□□□ 1.09
ACTN4-202ENST00000390009 SLC27A2O14975 620 aa21.85■■□□□ 1.09
ACTN4-202ENST00000390009 TAF5LO75529 589 aa21.85■■□□□ 1.09
ACTN4-202ENST00000390009 CHGBP05060 677 aa21.85■■□□□ 1.09
ACTN4-202ENST00000390009 IFIT1P09914 478 aaKnown RBP21.85■■□□□ 1.09
ACTN4-202ENST00000390009 CPA1P15085 419 aa21.85■■□□□ 1.09
ACTN4-202ENST00000390009 FNBP4Q8N3X1 1017 aaPredicted RBP21.85■■□□□ 1.09
ACTN4-202ENST00000390009 ZSWIM6Q9HCJ5 1215 aa21.85■■□□□ 1.09
ACTN4-202ENST00000390009 RIC1Q4ADV7 1423 aa21.84■■□□□ 1.09
ACTN4-202ENST00000390009 BAG4O95429 457 aaKnown RBP21.84■■□□□ 1.09
ACTN4-202ENST00000390009 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.84■■□□□ 1.09
ACTN4-202ENST00000390009 RIPOR2Q9Y4F9 1068 aa21.84■■□□□ 1.09
ACTN4-202ENST00000390009 CAMTA2O94983 1202 aa21.83■■□□□ 1.09
ACTN4-202ENST00000390009 RNF20Q5VTR2 975 aa21.83■■□□□ 1.09
ACTN4-202ENST00000390009 LDHAL6AQ6ZMR3 332 aa21.83■■□□□ 1.09
ACTN4-202ENST00000390009 XAGE2Q96GT9 111 aa21.83■■□□□ 1.09
ACTN4-202ENST00000390009 MCMDC2Q4G0Z9 681 aa21.83■■□□□ 1.08
ACTN4-202ENST00000390009 ZDHHC9Q9Y397 364 aa21.83■■□□□ 1.08
ACTN4-202ENST00000390009 CYP46A1Q9Y6A2 500 aa21.83■■□□□ 1.08
ACTN4-202ENST00000390009 PTMSP20962 102 aa21.82■■□□□ 1.08
ACTN4-202ENST00000390009 ADORA1P30542 326 aa21.82■■□□□ 1.08
ACTN4-202ENST00000390009 CCDC158Q5M9N0 1113 aa21.82■■□□□ 1.08
ACTN4-202ENST00000390009 VPS53Q5VIR6 699 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms