RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 LEKR1Q6ZMV7 388 aa18.7■□□□□ 0.58
PTPRN2-201ENST00000389413 DNAJC25Q9H1X3 360 aa18.7■□□□□ 0.58
PTPRN2-201ENST00000389413 PLEKHG3A1L390 1219 aa18.69■□□□□ 0.58
PTPRN2-201ENST00000389413 TMEM67Q5HYA8 995 aa18.69■□□□□ 0.58
PTPRN2-201ENST00000389413 KLHL10Q6JEL2 608 aa18.69■□□□□ 0.58
PTPRN2-201ENST00000389413 MICU3Q86XE3 530 aa18.69■□□□□ 0.58
PTPRN2-201ENST00000389413 KCNG4Q8TDN1 519 aa18.69■□□□□ 0.58
PTPRN2-201ENST00000389413 BICC1Q9H694 974 aaKnown RBP18.69■□□□□ 0.58
PTPRN2-201ENST00000389413 CDR1P51861 262 aa18.69■□□□□ 0.58
PTPRN2-201ENST00000389413 RAB11FIP4Q86YS3 637 aa18.69■□□□□ 0.58
PTPRN2-201ENST00000389413 PIBF1Q8WXW3 757 aa18.69■□□□□ 0.58
PTPRN2-201ENST00000389413 MRPS27Q92552 414 aaKnown RBP18.69■□□□□ 0.58
PTPRN2-201ENST00000389413 GCP02774 474 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 CEP135Q66GS9 1140 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 DEF6Q9H4E7 631 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 PAG1Q9NWQ8 432 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 IQGAP3Q86VI3 1631 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 KCNA6P17658 529 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 CCDC102BQ68D86 513 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 IQCA1Q86XH1 822 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 NFATC2IPQ8NCF5 419 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 SIRT1Q96EB6 747 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 CAVIN4Q5BKX8 364 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 PPP4R3BQ5MIZ7 849 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 CCDC43Q96MW1 224 aaKnown RBP18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 ARHGEF10O15013 1369 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 CCDC150Q8NCX0 1101 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 ANTXR1Q9H6X2 564 aa18.68■□□□□ 0.58
PTPRN2-201ENST00000389413 CTCFLQ8NI51 663 aaPredicted RBP18.67■□□□□ 0.58
PTPRN2-201ENST00000389413 NEO1Q92859 1461 aa18.67■□□□□ 0.58
PTPRN2-201ENST00000389413 SNW1Q13573 536 aaKnown RBP18.67■□□□□ 0.58
PTPRN2-201ENST00000389413 LUC7LQ9NQ29 371 aaKnown RBP18.67■□□□□ 0.58
PTPRN2-201ENST00000389413 PRDM10Q9NQV6 1147 aa18.67■□□□□ 0.58
PTPRN2-201ENST00000389413 KRT18P05783 430 aaKnown RBP18.67■□□□□ 0.58
PTPRN2-201ENST00000389413 PRKCSHP14314 528 aaPredicted RBP18.67■□□□□ 0.58
PTPRN2-201ENST00000389413 HSPA4P34932 840 aa18.67■□□□□ 0.58
PTPRN2-201ENST00000389413 IKQ13123 557 aaPredicted RBP18.67■□□□□ 0.58
PTPRN2-201ENST00000389413 CTDP1Q9Y5B0 961 aaPredicted RBP18.67■□□□□ 0.58
PTPRN2-201ENST00000389413 ZNF652Q9Y2D9 606 aa18.66■□□□□ 0.58
PTPRN2-201ENST00000389413 CCDC144CPQ8IYA2 1237 aa18.66■□□□□ 0.58
PTPRN2-201ENST00000389413 CLASP1Q7Z460 1538 aa18.66■□□□□ 0.58
PTPRN2-201ENST00000389413 BRD1O95696 1058 aa18.66■□□□□ 0.58
PTPRN2-201ENST00000389413 NBPF7P0C2Y1 421 aaPredicted RBP18.66■□□□□ 0.58
PTPRN2-201ENST00000389413 SKILP12757 684 aa18.66■□□□□ 0.58
PTPRN2-201ENST00000389413 SYKP43405 635 aa18.66■□□□□ 0.58
PTPRN2-201ENST00000389413 TFCP2Q12800 502 aa18.66■□□□□ 0.58
PTPRN2-201ENST00000389413 DHX32Q7L7V1 743 aaKnown RBP18.66■□□□□ 0.58
PTPRN2-201ENST00000389413 RANBP6O60518 1105 aaKnown RBP18.66■□□□□ 0.58
PTPRN2-201ENST00000389413 EIF5P55010 431 aaKnown RBP18.66■□□□□ 0.58
PTPRN2-201ENST00000389413 CASQ1P31415 396 aa18.65■□□□□ 0.58
PTPRN2-201ENST00000389413 TXLNBQ8N3L3 684 aa18.65■□□□□ 0.58
PTPRN2-201ENST00000389413 AXDND1Q5T1B0 1012 aaPredicted RBP18.65■□□□□ 0.58
PTPRN2-201ENST00000389413 AATKQ6ZMQ8 1374 aa18.65■□□□□ 0.58
PTPRN2-201ENST00000389413 KIF5CO60282 957 aa18.65■□□□□ 0.58
PTPRN2-201ENST00000389413 UQCRFS1P1P0C7P4 283 aa18.65■□□□□ 0.58
PTPRN2-201ENST00000389413 ISM2Q6H9L7 571 aa18.65■□□□□ 0.58
PTPRN2-201ENST00000389413 MFSD6Q6ZSS7 791 aa18.64■□□□□ 0.58
PTPRN2-201ENST00000389413 ATP2B3Q16720 1220 aa18.64■□□□□ 0.57
PTPRN2-201ENST00000389413 CADPS2Q86UW7 1296 aa18.64■□□□□ 0.57
PTPRN2-201ENST00000389413 SLC26A6Q9BXS9 759 aa18.64■□□□□ 0.57
PTPRN2-201ENST00000389413 FAM135BQ49AJ0 1406 aa18.64■□□□□ 0.57
PTPRN2-201ENST00000389413 BICDL1Q6ZP65 573 aa18.64■□□□□ 0.57
PTPRN2-201ENST00000389413 TANGO6Q9C0B7 1094 aa18.64■□□□□ 0.57
PTPRN2-201ENST00000389413 SHROOM2Q13796 1616 aa18.64■□□□□ 0.57
PTPRN2-201ENST00000389413 RPS6KB1P23443 525 aa18.64■□□□□ 0.57
PTPRN2-201ENST00000389413 CCDC181Q5TID7 509 aa18.64■□□□□ 0.57
PTPRN2-201ENST00000389413 ZCRB1Q8TBF4 217 aaKnown RBP18.64■□□□□ 0.57
PTPRN2-201ENST00000389413 ALG1Q9BT22 464 aa18.64■□□□□ 0.57
PTPRN2-201ENST00000389413 LGR6Q9HBX8 967 aa18.64■□□□□ 0.57
PTPRN2-201ENST00000389413 KIF1BO60333 1816 aa18.63■□□□□ 0.57
PTPRN2-201ENST00000389413 SLC27A2O14975 620 aa18.63■□□□□ 0.57
PTPRN2-201ENST00000389413 RNF113AO15541 343 aaKnown RBP18.63■□□□□ 0.57
PTPRN2-201ENST00000389413 ZBTB43O43298 467 aa18.63■□□□□ 0.57
PTPRN2-201ENST00000389413 CATIPQ7Z7H3 387 aa18.63■□□□□ 0.57
PTPRN2-201ENST00000389413 TMEM63CQ9P1W3 806 aa18.63■□□□□ 0.57
PTPRN2-201ENST00000389413 PTPDC1A2A3K4 754 aa18.63■□□□□ 0.57
PTPRN2-201ENST00000389413 APOBRQ0VD83 1088 aa18.63■□□□□ 0.57
PTPRN2-201ENST00000389413 KANK3Q6NY19 840 aa18.63■□□□□ 0.57
PTPRN2-201ENST00000389413 SAMD1Q6SPF0 538 aaPredicted RBP18.63■□□□□ 0.57
PTPRN2-201ENST00000389413 USP44Q9H0E7 712 aa18.63■□□□□ 0.57
PTPRN2-201ENST00000389413 ATP2B2Q01814 1243 aa18.62■□□□□ 0.57
PTPRN2-201ENST00000389413 KIF4BQ2VIQ3 1234 aa18.62■□□□□ 0.57
PTPRN2-201ENST00000389413 KIAA1328Q86T90 577 aa18.62■□□□□ 0.57
PTPRN2-201ENST00000389413 AOPEPQ8N6M6 819 aa18.62■□□□□ 0.57
PTPRN2-201ENST00000389413 SSH3Q8TE77 659 aa18.62■□□□□ 0.57
PTPRN2-201ENST00000389413 BMP2KQ9NSY1 1161 aaPredicted RBP18.62■□□□□ 0.57
PTPRN2-201ENST00000389413 GOLGA6L9A6NEM1 432 aa18.62■□□□□ 0.57
PTPRN2-201ENST00000389413 PRC1O43663 620 aa18.62■□□□□ 0.57
PTPRN2-201ENST00000389413 IQCEQ6IPM2 695 aa18.62■□□□□ 0.57
PTPRN2-201ENST00000389413 DCAF5Q96JK2 942 aa18.62■□□□□ 0.57
PTPRN2-201ENST00000389413 GBP3Q9H0R5 595 aa18.62■□□□□ 0.57
PTPRN2-201ENST00000389413 SSH2Q76I76 1423 aa18.61■□□□□ 0.57
PTPRN2-201ENST00000389413 PTGS1P23219 599 aa18.61■□□□□ 0.57
PTPRN2-201ENST00000389413 SPTLC2O15270 562 aa18.61■□□□□ 0.57
PTPRN2-201ENST00000389413 LUZP1Q86V48 1076 aa18.61■□□□□ 0.57
PTPRN2-201ENST00000389413 GADD45BO75293 160 aaPredicted RBP18.61■□□□□ 0.57
PTPRN2-201ENST00000389413 MEX3CQ5U5Q3 659 aaKnown RBP18.61■□□□□ 0.57
PTPRN2-201ENST00000389413 CCDC148Q8NFR7 591 aa18.61■□□□□ 0.57
PTPRN2-201ENST00000389413 FSD2A1L4K1 749 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms