RNA–Protein interactions for RNA: ENST00000389378.6

TNIP1-202, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-202ENST00000389378 NAP1L2Q9ULW6 460 aaPredicted RBP19.28■□□□□ 0.68
TNIP1-202ENST00000389378 NCBP1Q09161 790 aaKnown RBP19.28■□□□□ 0.68
TNIP1-202ENST00000389378 CLSTN2Q9H4D0 955 aa19.28■□□□□ 0.68
TNIP1-202ENST00000389378 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.28■□□□□ 0.68
TNIP1-202ENST00000389378 V9GYY5 206 aaPredicted RBP19.28■□□□□ 0.68
TNIP1-202ENST00000389378 NPHP3Q7Z494 1330 aa19.28■□□□□ 0.68
TNIP1-202ENST00000389378 PIP4K2AP48426 406 aaPredicted RBP19.28■□□□□ 0.68
TNIP1-202ENST00000389378 FGD1P98174 961 aa19.28■□□□□ 0.68
TNIP1-202ENST00000389378 MTX1Q13505 466 aa19.28■□□□□ 0.68
TNIP1-202ENST00000389378 NWD1Q149M9 1564 aa19.27■□□□□ 0.68
TNIP1-202ENST00000389378 GRM8O00222 908 aa19.27■□□□□ 0.68
TNIP1-202ENST00000389378 MYL6BP14649 208 aa19.27■□□□□ 0.68
TNIP1-202ENST00000389378 CEMIPQ8WUJ3 1361 aa19.27■□□□□ 0.68
TNIP1-202ENST00000389378 PIK3C2AO00443 1686 aa19.27■□□□□ 0.68
TNIP1-202ENST00000389378 ELP1O95163 1332 aa19.27■□□□□ 0.67
TNIP1-202ENST00000389378 KCNA6P17658 529 aa19.26■□□□□ 0.67
TNIP1-202ENST00000389378 SLFNL1Q499Z3 407 aa19.26■□□□□ 0.67
TNIP1-202ENST00000389378 ANKRD7Q92527 254 aa19.26■□□□□ 0.67
TNIP1-202ENST00000389378 DNAJC2Q99543 621 aaKnown RBP19.26■□□□□ 0.67
TNIP1-202ENST00000389378 DDX19AQ9NUU7 478 aaKnown RBP19.26■□□□□ 0.67
TNIP1-202ENST00000389378 LRRC37A3O60309 1634 aa19.26■□□□□ 0.67
TNIP1-202ENST00000389378 LMOD2Q6P5Q4 547 aa19.26■□□□□ 0.67
TNIP1-202ENST00000389378 FILIP1Q7Z7B0 1213 aa19.26■□□□□ 0.67
TNIP1-202ENST00000389378 PLEKHG1Q9ULL1 1385 aa19.26■□□□□ 0.67
TNIP1-202ENST00000389378 USP27XA6NNY8 438 aa19.25■□□□□ 0.67
TNIP1-202ENST00000389378 Q6ZUG5 572 aa19.25■□□□□ 0.67
TNIP1-202ENST00000389378 C11orf57Q6ZUT1 292 aaPredicted RBP19.25■□□□□ 0.67
TNIP1-202ENST00000389378 PLA2G4DQ86XP0 818 aa19.25■□□□□ 0.67
TNIP1-202ENST00000389378 TRMT1Q9NXH9 659 aaKnown RBP19.25■□□□□ 0.67
TNIP1-202ENST00000389378 DIP2BQ9P265 1576 aa19.25■□□□□ 0.67
TNIP1-202ENST00000389378 CTIFO43310 598 aaKnown RBP19.25■□□□□ 0.67
TNIP1-202ENST00000389378 GIGYF1O75420 1035 aaPredicted RBP19.25■□□□□ 0.67
TNIP1-202ENST00000389378 GUCY1B3Q02153 619 aa19.25■□□□□ 0.67
TNIP1-202ENST00000389378 ANKRD1Q15327 319 aa19.25■□□□□ 0.67
TNIP1-202ENST00000389378 USP16Q9Y5T5 823 aa19.24■□□□□ 0.67
TNIP1-202ENST00000389378 GOLGA6L19H0YKK7 550 aa19.24■□□□□ 0.67
TNIP1-202ENST00000389378 SLC39A6Q13433 755 aa19.24■□□□□ 0.67
TNIP1-202ENST00000389378 EPHA10Q5JZY3 1008 aa19.24■□□□□ 0.67
TNIP1-202ENST00000389378 RIC3Q7Z5B4 369 aa19.24■□□□□ 0.67
TNIP1-202ENST00000389378 NPHP4O75161 1426 aaPredicted RBP19.24■□□□□ 0.67
TNIP1-202ENST00000389378 TAF5LO75529 589 aa19.24■□□□□ 0.67
TNIP1-202ENST00000389378 ALDH1L1O75891 902 aa19.24■□□□□ 0.67
TNIP1-202ENST00000389378 HIP1O00291 1037 aa19.23■□□□□ 0.67
TNIP1-202ENST00000389378 NPHP1O15259 732 aa19.23■□□□□ 0.67
TNIP1-202ENST00000389378 C1orf141Q5JVX7 400 aa19.23■□□□□ 0.67
TNIP1-202ENST00000389378 CCDC112Q8NEF3 446 aa19.23■□□□□ 0.67
TNIP1-202ENST00000389378 TDRD7Q8NHU6 1098 aaKnown RBP19.23■□□□□ 0.67
TNIP1-202ENST00000389378 TAOK2Q9UL54 1235 aa19.23■□□□□ 0.67
TNIP1-202ENST00000389378 IP6K1Q92551 441 aa19.23■□□□□ 0.67
TNIP1-202ENST00000389378 CCT2P78371 535 aaKnown RBP19.22■□□□□ 0.67
TNIP1-202ENST00000389378 NEK1Q96PY6 1258 aa19.22■□□□□ 0.67
TNIP1-202ENST00000389378 RNMTO43148 476 aaKnown RBP19.22■□□□□ 0.67
TNIP1-202ENST00000389378 HOXB7P09629 217 aa19.22■□□□□ 0.67
TNIP1-202ENST00000389378 LINS1Q8NG48 757 aa19.22■□□□□ 0.67
TNIP1-202ENST00000389378 SYTL4Q96C24 671 aaPredicted RBP19.22■□□□□ 0.67
TNIP1-202ENST00000389378 RESTQ13127 1097 aa19.21■□□□□ 0.67
TNIP1-202ENST00000389378 AKAP4Q5JQC9 854 aa19.21■□□□□ 0.67
TNIP1-202ENST00000389378 DDX46Q7L014 1031 aaKnown RBP19.21■□□□□ 0.67
TNIP1-202ENST00000389378 GTF3C6Q969F1 213 aa19.21■□□□□ 0.67
TNIP1-202ENST00000389378 COL15A1P39059 1388 aa19.21■□□□□ 0.67
TNIP1-202ENST00000389378 IGKV5-2P06315 115 aa19.21■□□□□ 0.67
TNIP1-202ENST00000389378 UTP14CQ5TAP6 766 aaKnown RBP19.21■□□□□ 0.67
TNIP1-202ENST00000389378 SMTNL1A8MU46 457 aa19.21■□□□□ 0.67
TNIP1-202ENST00000389378 PLEKHO1Q53GL0 409 aaPredicted RBP19.21■□□□□ 0.67
TNIP1-202ENST00000389378 CHST3Q7LGC8 479 aa19.21■□□□□ 0.67
TNIP1-202ENST00000389378 CCAR1Q8IX12 1150 aaKnown RBP19.21■□□□□ 0.67
TNIP1-202ENST00000389378 BECN2A8MW95 431 aa19.2■□□□□ 0.66
TNIP1-202ENST00000389378 SCRN1Q12765 414 aa19.2■□□□□ 0.66
TNIP1-202ENST00000389378 NCOA5Q9HCD5 579 aaKnown RBP19.2■□□□□ 0.66
TNIP1-202ENST00000389378 DIP2AQ14689 1571 aa19.2■□□□□ 0.66
TNIP1-202ENST00000389378 UBR1Q8IWV7 1749 aa19.2■□□□□ 0.66
TNIP1-202ENST00000389378 CEP135Q66GS9 1140 aa19.2■□□□□ 0.66
TNIP1-202ENST00000389378 GOLPH3LQ9H4A5 285 aa19.2■□□□□ 0.66
TNIP1-202ENST00000389378 CYP21A2P08686 494 aa19.19■□□□□ 0.66
TNIP1-202ENST00000389378 MYD88Q99836 296 aa19.19■□□□□ 0.66
TNIP1-202ENST00000389378 DBNLQ9UJU6 430 aaKnown RBP19.19■□□□□ 0.66
TNIP1-202ENST00000389378 A0A0G2JLW4 131 aa19.19■□□□□ 0.66
TNIP1-202ENST00000389378 TFCP2Q12800 502 aa19.19■□□□□ 0.66
TNIP1-202ENST00000389378 MED23Q9ULK4 1368 aa19.19■□□□□ 0.66
TNIP1-202ENST00000389378 SKILP12757 684 aa19.18■□□□□ 0.66
TNIP1-202ENST00000389378 APOBRQ0VD83 1088 aa19.18■□□□□ 0.66
TNIP1-202ENST00000389378 RBM43Q6ZSC3 357 aaKnown RBP19.18■□□□□ 0.66
TNIP1-202ENST00000389378 LRRC8AQ8IWT6 810 aa19.18■□□□□ 0.66
TNIP1-202ENST00000389378 TBX22Q9Y458 520 aa19.18■□□□□ 0.66
TNIP1-202ENST00000389378 PSME1Q06323 249 aa19.18■□□□□ 0.66
TNIP1-202ENST00000389378 IQCB1Q15051 598 aa19.18■□□□□ 0.66
TNIP1-202ENST00000389378 PHF8Q9UPP1 1060 aa19.18■□□□□ 0.66
TNIP1-202ENST00000389378 GTPBP4Q9BZE4 634 aaKnown RBP19.18■□□□□ 0.66
TNIP1-202ENST00000389378 DBNDD2Q9BQY9 259 aa19.17■□□□□ 0.66
TNIP1-202ENST00000389378 ESCO1Q5FWF5 840 aa19.17■□□□□ 0.66
TNIP1-202ENST00000389378 USP28Q96RU2 1077 aa19.17■□□□□ 0.66
TNIP1-202ENST00000389378 CTNNA3Q9UI47 895 aa19.17■□□□□ 0.66
TNIP1-202ENST00000389378 CRYBG1Q9Y4K1 1723 aa19.16■□□□□ 0.66
TNIP1-202ENST00000389378 N4BP2Q86UW6 1770 aaPredicted RBP19.16■□□□□ 0.66
TNIP1-202ENST00000389378 DDX58O95786 925 aaKnown RBP19.16■□□□□ 0.66
TNIP1-202ENST00000389378 STOX1Q6ZVD7 989 aa19.16■□□□□ 0.66
TNIP1-202ENST00000389378 ZNF771Q7L3S4 317 aaPredicted RBP19.16■□□□□ 0.66
TNIP1-202ENST00000389378 CHMP4AQ9BY43 222 aa19.16■□□□□ 0.66
TNIP1-202ENST00000389378 HMG20BQ9P0W2 317 aa19.16■□□□□ 0.66
TNIP1-202ENST00000389378 CFAP45Q9UL16 551 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms