RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 RBM26Q5T8P6 1007 aaKnown RBP12.84□□□□□ -0.35
IFT88-203ENST00000389373 PRPF38BQ5VTL8 546 aaKnown RBP12.84□□□□□ -0.35
IFT88-203ENST00000389373 GBA2Q9HCG7 927 aaPredicted RBP12.84□□□□□ -0.35
IFT88-203ENST00000389373 RNF186Q9NXI6 227 aa12.84□□□□□ -0.35
IFT88-203ENST00000389373 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
IFT88-203ENST00000389373 COL3A1P02461 1466 aaPredicted RBP12.84□□□□□ -0.35
IFT88-203ENST00000389373 FAM155AB1AL88 458 aaPredicted RBP12.83□□□□□ -0.36
IFT88-203ENST00000389373 TBC1D10BQ4KMP7 808 aaPredicted RBP12.83□□□□□ -0.36
IFT88-203ENST00000389373 SAMD7Q7Z3H4 446 aa12.83□□□□□ -0.36
IFT88-203ENST00000389373 MICALL2Q8IY33 904 aa12.83□□□□□ -0.36
IFT88-203ENST00000389373 ZNF34Q8IZ26 560 aa12.83□□□□□ -0.36
IFT88-203ENST00000389373 CCDC102AQ96A19 550 aa12.83□□□□□ -0.36
IFT88-203ENST00000389373 ABCC4O15439 1325 aa12.83□□□□□ -0.36
IFT88-203ENST00000389373 RIC1Q4ADV7 1423 aa12.82□□□□□ -0.36
IFT88-203ENST00000389373 KIAA2012Q0VF49 1180 aa12.82□□□□□ -0.36
IFT88-203ENST00000389373 KRT26Q7Z3Y9 468 aa12.82□□□□□ -0.36
IFT88-203ENST00000389373 SP8Q8IXZ3 490 aa12.82□□□□□ -0.36
IFT88-203ENST00000389373 RTFDC1Q9BY42 306 aaPredicted RBP12.82□□□□□ -0.36
IFT88-203ENST00000389373 SAGE1Q9NXZ1 904 aa12.82□□□□□ -0.36
IFT88-203ENST00000389373 CDHR2Q9BYE9 1310 aa12.82□□□□□ -0.36
IFT88-203ENST00000389373 YDJCA8MPS7 323 aa12.81□□□□□ -0.36
IFT88-203ENST00000389373 ADM5C9JUS6 153 aa12.81□□□□□ -0.36
IFT88-203ENST00000389373 GIGYF2Q6Y7W6 1299 aaKnown RBP12.81□□□□□ -0.36
IFT88-203ENST00000389373 CTU1Q7Z7A3 348 aaKnown RBP12.81□□□□□ -0.36
IFT88-203ENST00000389373 DCPSQ96C86 337 aaKnown RBP12.81□□□□□ -0.36
IFT88-203ENST00000389373 UTP14AQ9BVJ6 771 aaKnown RBP12.81□□□□□ -0.36
IFT88-203ENST00000389373 HTATSF1O43719 755 aaKnown RBP12.8□□□□□ -0.36
IFT88-203ENST00000389373 BBOX1O75936 387 aa12.8□□□□□ -0.36
IFT88-203ENST00000389373 HCLS1P14317 486 aaPredicted RBP12.8□□□□□ -0.36
IFT88-203ENST00000389373 PARP10Q53GL7 1025 aa12.8□□□□□ -0.36
IFT88-203ENST00000389373 DDX46Q7L014 1031 aaKnown RBP12.8□□□□□ -0.36
IFT88-203ENST00000389373 CSRNP1Q96S65 589 aa12.8□□□□□ -0.36
IFT88-203ENST00000389373 THUMPD2Q9BTF0 503 aaKnown RBP12.8□□□□□ -0.36
IFT88-203ENST00000389373 IBTKQ9P2D0 1353 aaPredicted RBP12.8□□□□□ -0.36
IFT88-203ENST00000389373 PSMD14O00487 310 aa12.79□□□□□ -0.36
IFT88-203ENST00000389373 RIMBP2O15034 1052 aa12.79□□□□□ -0.36
IFT88-203ENST00000389373 PNISRQ8TF01 805 aaKnown RBP12.79□□□□□ -0.36
IFT88-203ENST00000389373 DBNDD1Q9H9R9 158 aa12.79□□□□□ -0.36
IFT88-203ENST00000389373 HDAC9Q9UKV0 1011 aa12.79□□□□□ -0.36
IFT88-203ENST00000389373 HPS5Q9UPZ3 1129 aa12.79□□□□□ -0.36
IFT88-203ENST00000389373 NUP98P52948 1817 aa12.78□□□□□ -0.36
IFT88-203ENST00000389373 EGFRP00533 1210 aa12.78□□□□□ -0.36
IFT88-203ENST00000389373 EIF4A1P60842 406 aaKnown RBP12.78□□□□□ -0.36
IFT88-203ENST00000389373 SLC10A5Q5PT55 438 aa12.78□□□□□ -0.36
IFT88-203ENST00000389373 DPF2Q92785 391 aa12.78□□□□□ -0.36
IFT88-203ENST00000389373 ZNF428Q96B54 188 aa12.78□□□□□ -0.36
IFT88-203ENST00000389373 CLSPNQ9HAW4 1339 aa12.78□□□□□ -0.36
IFT88-203ENST00000389373 TNRC18O15417 2968 aaPredicted RBP12.78□□□□□ -0.36
IFT88-203ENST00000389373 C6orf229H3BNL8 230 aa12.77□□□□□ -0.37
IFT88-203ENST00000389373 NEFMP07197 916 aa12.77□□□□□ -0.37
IFT88-203ENST00000389373 SLC10A3P09131 477 aa12.77□□□□□ -0.37
IFT88-203ENST00000389373 EIF2S2P20042 333 aaKnown RBP12.77□□□□□ -0.37
IFT88-203ENST00000389373 GRAPQ13588 217 aa12.77□□□□□ -0.37
IFT88-203ENST00000389373 DOK7Q18PE1 504 aa12.77□□□□□ -0.37
IFT88-203ENST00000389373 WASHC4Q2M389 1173 aa12.77□□□□□ -0.37
IFT88-203ENST00000389373 GRAPLQ8TC17 118 aaPredicted RBP12.77□□□□□ -0.37
IFT88-203ENST00000389373 ANXA1P04083 346 aa12.76□□□□□ -0.37
IFT88-203ENST00000389373 AIMP1Q12904 312 aaKnown RBP12.76□□□□□ -0.37
IFT88-203ENST00000389373 SULF1Q8IWU6 871 aa12.76□□□□□ -0.37
IFT88-203ENST00000389373 KCNQ5Q9NR82 932 aa12.76□□□□□ -0.37
IFT88-203ENST00000389373 NSFL1CQ9UNZ2 370 aaKnown RBP12.76□□□□□ -0.37
IFT88-203ENST00000389373 TBC1D8O95759 1140 aa12.75□□□□□ -0.37
IFT88-203ENST00000389373 KIF4BQ2VIQ3 1234 aa12.75□□□□□ -0.37
IFT88-203ENST00000389373 GGA3Q9NZ52 723 aa12.75□□□□□ -0.37
IFT88-203ENST00000389373 TRMT112Q9UI30 125 aaKnown RBP12.75□□□□□ -0.37
IFT88-203ENST00000389373 ASTN2O75129 1339 aaPredicted RBP12.74□□□□□ -0.37
IFT88-203ENST00000389373 G3V3G9 751 aa12.74□□□□□ -0.37
IFT88-203ENST00000389373 ECE2O60344 883 aa12.74□□□□□ -0.37
IFT88-203ENST00000389373 PKN2Q16513 984 aaKnown RBP12.74□□□□□ -0.37
IFT88-203ENST00000389373 DCAF8Q5TAQ9 597 aa12.74□□□□□ -0.37
IFT88-203ENST00000389373 RASAL3Q86YV0 1011 aa12.74□□□□□ -0.37
IFT88-203ENST00000389373 NECTIN2Q92692 538 aa12.74□□□□□ -0.37
IFT88-203ENST00000389373 CDCA5Q96FF9 252 aa12.74□□□□□ -0.37
IFT88-203ENST00000389373 RPS12P25398 132 aaKnown RBP12.73□□□□□ -0.37
IFT88-203ENST00000389373 NLRP10Q86W26 655 aa12.73□□□□□ -0.37
IFT88-203ENST00000389373 REM2Q8IYK8 340 aaPredicted RBP12.73□□□□□ -0.37
IFT88-203ENST00000389373 ZNF296Q8WUU4 475 aaPredicted RBP12.73□□□□□ -0.37
IFT88-203ENST00000389373 GCC1Q96CN9 775 aa12.73□□□□□ -0.37
IFT88-203ENST00000389373 LAMB4A4D0S4 1761 aa12.73□□□□□ -0.37
IFT88-203ENST00000389373 SH3TC1Q8TE82 1336 aa12.72□□□□□ -0.37
IFT88-203ENST00000389373 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
IFT88-203ENST00000389373 COPS6Q7L5N1 327 aa12.72□□□□□ -0.37
IFT88-203ENST00000389373 TMC4Q7Z404 712 aa12.72□□□□□ -0.37
IFT88-203ENST00000389373 EYA3Q99504 573 aa12.72□□□□□ -0.37
IFT88-203ENST00000389373 POLLQ9UGP5 575 aa12.72□□□□□ -0.37
IFT88-203ENST00000389373 PDE4DIPQ5VU43 2346 aa12.72□□□□□ -0.37
IFT88-203ENST00000389373 ERBB4Q15303 1308 aa12.71□□□□□ -0.37
IFT88-203ENST00000389373 AKAP11Q9UKA4 1901 aa12.71□□□□□ -0.37
IFT88-203ENST00000389373 PPP2R1AP30153 589 aa12.71□□□□□ -0.37
IFT88-203ENST00000389373 GPSM2P81274 684 aa12.71□□□□□ -0.37
IFT88-203ENST00000389373 MKRN3Q13064 507 aaKnown RBP12.71□□□□□ -0.37
IFT88-203ENST00000389373 PDIA6Q15084 440 aa12.71□□□□□ -0.37
IFT88-203ENST00000389373 PROSER3Q2NL68 480 aa12.71□□□□□ -0.37
IFT88-203ENST00000389373 ANGEL2Q5VTE6 544 aaKnown RBP12.71□□□□□ -0.37
IFT88-203ENST00000389373 MOB2Q70IA6 237 aa12.71□□□□□ -0.37
IFT88-203ENST00000389373 CCER1Q8TC90 406 aaPredicted RBP12.71□□□□□ -0.37
IFT88-203ENST00000389373 CELF1Q92879 486 aaKnown RBP12.71□□□□□ -0.37
IFT88-203ENST00000389373 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
IFT88-203ENST00000389373 SCAF8Q9UPN6 1271 aaKnown RBP12.71□□□□□ -0.37
IFT88-203ENST00000389373 UBE2Q2LH0YL09 131 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms