RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 IRS4O14654 1257 aaPredicted RBP17.11■□□□□ 0.33
LRRK1-201ENST00000388948 CALM1P0DP23 149 aa17.1■□□□□ 0.33
LRRK1-201ENST00000388948 CALM2P0DP24 149 aa17.1■□□□□ 0.33
LRRK1-201ENST00000388948 CALM3P0DP25 149 aa17.1■□□□□ 0.33
LRRK1-201ENST00000388948 MCM5P33992 734 aa17.1■□□□□ 0.33
LRRK1-201ENST00000388948 BAG6P46379 1132 aa17.1■□□□□ 0.33
LRRK1-201ENST00000388948 NUP88Q99567 741 aaPredicted RBP17.1■□□□□ 0.33
LRRK1-201ENST00000388948 ORC3Q9UBD5 711 aaPredicted RBP17.1■□□□□ 0.33
LRRK1-201ENST00000388948 SPDYE3A6NKU9 549 aa17.1■□□□□ 0.33
LRRK1-201ENST00000388948 CCDC91Q7Z6B0 441 aa17.1■□□□□ 0.33
LRRK1-201ENST00000388948 GRM8O00222 908 aa17.1■□□□□ 0.33
LRRK1-201ENST00000388948 APBA3O96018 575 aa17.1■□□□□ 0.33
LRRK1-201ENST00000388948 ANKRD2Q9GZV1 360 aa17.1■□□□□ 0.33
LRRK1-201ENST00000388948 HOMER2Q9NSB8 354 aa17.1■□□□□ 0.33
LRRK1-201ENST00000388948 LDHBP07195 334 aaKnown RBP17.1■□□□□ 0.33
LRRK1-201ENST00000388948 HELBQ8NG08 1087 aaPredicted RBP17.1■□□□□ 0.33
LRRK1-201ENST00000388948 NEK1Q96PY6 1258 aa17.09■□□□□ 0.33
LRRK1-201ENST00000388948 CCDC113Q9H0I3 377 aa17.09■□□□□ 0.33
LRRK1-201ENST00000388948 ANO10Q9NW15 660 aa17.09■□□□□ 0.33
LRRK1-201ENST00000388948 USP21Q9UK80 565 aa17.09■□□□□ 0.33
LRRK1-201ENST00000388948 LIMCH1Q9UPQ0 1083 aa17.09■□□□□ 0.33
LRRK1-201ENST00000388948 GCP02774 474 aa17.09■□□□□ 0.33
LRRK1-201ENST00000388948 ZFYP08048 801 aaPredicted RBP17.09■□□□□ 0.33
LRRK1-201ENST00000388948 SLC9C2Q5TAH2 1124 aa17.09■□□□□ 0.33
LRRK1-201ENST00000388948 LRRC27Q9C0I9 530 aa17.09■□□□□ 0.33
LRRK1-201ENST00000388948 C6orf50Q9HD87 102 aa17.09■□□□□ 0.33
LRRK1-201ENST00000388948 MCM9Q9NXL9 1143 aa17.09■□□□□ 0.33
LRRK1-201ENST00000388948 CWC15Q9P013 229 aaKnown RBP17.09■□□□□ 0.33
LRRK1-201ENST00000388948 PCDH11XQ9BZA7 1347 aa17.09■□□□□ 0.33
LRRK1-201ENST00000388948 PCDH11YQ9BZA8 1340 aa17.09■□□□□ 0.33
LRRK1-201ENST00000388948 LEKR1Q6ZMV7 388 aa17.09■□□□□ 0.33
LRRK1-201ENST00000388948 SSX2IPQ9Y2D8 614 aa17.09■□□□□ 0.33
LRRK1-201ENST00000388948 NKTRP30414 1462 aaKnown RBP17.09■□□□□ 0.33
LRRK1-201ENST00000388948 H0YIN7 160 aa17.08■□□□□ 0.33
LRRK1-201ENST00000388948 SP4Q02446 784 aa17.08■□□□□ 0.33
LRRK1-201ENST00000388948 TSHZ3Q63HK5 1081 aa17.08■□□□□ 0.33
LRRK1-201ENST00000388948 FAM212AQ96EL1 285 aa17.08■□□□□ 0.33
LRRK1-201ENST00000388948 A2MP01023 1474 aa17.08■□□□□ 0.32
LRRK1-201ENST00000388948 NAPAP54920 295 aa17.08■□□□□ 0.32
LRRK1-201ENST00000388948 GNAQP50148 359 aa17.08■□□□□ 0.32
LRRK1-201ENST00000388948 GRIPAP1Q4V328 841 aa17.08■□□□□ 0.32
LRRK1-201ENST00000388948 RFX1P22670 979 aa17.08■□□□□ 0.32
LRRK1-201ENST00000388948 USP37Q86T82 979 aa17.08■□□□□ 0.32
LRRK1-201ENST00000388948 GOPCQ9HD26 462 aa17.08■□□□□ 0.32
LRRK1-201ENST00000388948 GOLGA6L7A0A1B0GV03 622 aa17.08■□□□□ 0.32
LRRK1-201ENST00000388948 EAPPQ56P03 285 aaPredicted RBP17.08■□□□□ 0.32
LRRK1-201ENST00000388948 CNNM2Q9H8M5 875 aa17.08■□□□□ 0.32
LRRK1-201ENST00000388948 TRIM27P14373 513 aa17.07■□□□□ 0.32
LRRK1-201ENST00000388948 IL15P40933 162 aaPredicted RBP17.07■□□□□ 0.32
LRRK1-201ENST00000388948 ANKRD36BQ8N2N9 1353 aa17.07■□□□□ 0.32
LRRK1-201ENST00000388948 CDCA7Q9BWT1 371 aaPredicted RBP17.07■□□□□ 0.32
LRRK1-201ENST00000388948 TMOD4Q9NZQ9 345 aa17.07■□□□□ 0.32
LRRK1-201ENST00000388948 TMTC2Q8N394 836 aa17.07■□□□□ 0.32
LRRK1-201ENST00000388948 LUZP1Q86V48 1076 aa17.07■□□□□ 0.32
LRRK1-201ENST00000388948 LARGE2Q8N3Y3 721 aa17.07■□□□□ 0.32
LRRK1-201ENST00000388948 ZBTB43O43298 467 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 RAB3GAP1Q15042 981 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 CCDC184Q52MB2 194 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 UHRF1BP1Q6BDS2 1440 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 LMAN1P49257 510 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 FSIP1Q8NA03 581 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 CPLX3Q8WVH0 158 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 DYDC1Q8WWB3 177 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 DCAF5Q96JK2 942 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 PLCD4Q9BRC7 762 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 PYM1Q9BRP8 204 aaKnown RBP17.06■□□□□ 0.32
LRRK1-201ENST00000388948 EXOC1Q9NV70 894 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 MRPS9P82933 396 aaKnown RBP17.06■□□□□ 0.32
LRRK1-201ENST00000388948 DPH6Q7L8W6 267 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 USO1O60763 962 aaKnown RBP17.06■□□□□ 0.32
LRRK1-201ENST00000388948 EIF3JO75822 258 aaKnown RBP17.06■□□□□ 0.32
LRRK1-201ENST00000388948 TOP1P11387 765 aaKnown RBP17.06■□□□□ 0.32
LRRK1-201ENST00000388948 KSR2Q6VAB6 950 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 PODXL2Q9NZ53 605 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 ZBTB21Q9ULJ3 1066 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 RTN1Q16799 776 aa17.06■□□□□ 0.32
LRRK1-201ENST00000388948 KCNA6P17658 529 aa17.05■□□□□ 0.32
LRRK1-201ENST00000388948 GPHNQ9NQX3 736 aaPredicted RBP17.05■□□□□ 0.32
LRRK1-201ENST00000388948 IVNS1ABPQ9Y6Y0 642 aa17.05■□□□□ 0.32
LRRK1-201ENST00000388948 UFL1O94874 794 aa17.05■□□□□ 0.32
LRRK1-201ENST00000388948 PLCH2O75038 1416 aa17.05■□□□□ 0.32
LRRK1-201ENST00000388948 SFPQP23246 707 aaKnown RBP eCLIP17.05■□□□□ 0.32
LRRK1-201ENST00000388948 MIGA1Q8NAN2 632 aa17.05■□□□□ 0.32
LRRK1-201ENST00000388948 ZNF518AQ6AHZ1 1483 aa17.05■□□□□ 0.32
LRRK1-201ENST00000388948 TMCO5BA8MYB1 307 aa17.05■□□□□ 0.32
LRRK1-201ENST00000388948 KLF18A0A0U1RQI7 1052 aa17.05■□□□□ 0.32
LRRK1-201ENST00000388948 BACH1O14867 736 aa17.05■□□□□ 0.32
LRRK1-201ENST00000388948 PRKG1Q13976 671 aa17.05■□□□□ 0.32
LRRK1-201ENST00000388948 PRPF4BQ13523 1007 aaKnown RBP17.05■□□□□ 0.32
LRRK1-201ENST00000388948 KIAA0754O94854 1291 aa17.04■□□□□ 0.32
LRRK1-201ENST00000388948 HMG20BQ9P0W2 317 aa17.04■□□□□ 0.32
LRRK1-201ENST00000388948 EIF4G3O43432 1585 aaKnown RBP17.04■□□□□ 0.32
LRRK1-201ENST00000388948 WDR97A6NE52 1622 aa17.04■□□□□ 0.32
LRRK1-201ENST00000388948 ACTN2P35609 894 aa17.04■□□□□ 0.32
LRRK1-201ENST00000388948 NOP2P46087 812 aaKnown RBP17.04■□□□□ 0.32
LRRK1-201ENST00000388948 FAM114A1Q8IWE2 563 aa17.04■□□□□ 0.32
LRRK1-201ENST00000388948 MAGEB6Q8N7X4 407 aa17.04■□□□□ 0.32
LRRK1-201ENST00000388948 IMPG2Q9BZV3 1241 aa17.04■□□□□ 0.32
LRRK1-201ENST00000388948 BRDTQ58F21 947 aaPredicted RBP17.04■□□□□ 0.32
LRRK1-201ENST00000388948 YEATS4O95619 227 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms