RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 PLA2G12BQ9BX93 195 aa9.84□□□□□ -0.83
ERCC8-202ENST00000381118 GREM2Q9H772 168 aa9.84□□□□□ -0.83
ERCC8-202ENST00000381118 NTSR2O95665 410 aa9.83□□□□□ -0.84
ERCC8-202ENST00000381118 TFCP2Q12800 502 aa9.83□□□□□ -0.84
ERCC8-202ENST00000381118 IFIT5Q13325 482 aaKnown RBP9.83□□□□□ -0.84
ERCC8-202ENST00000381118 LRRC24Q50LG9 513 aa9.83□□□□□ -0.84
ERCC8-202ENST00000381118 TAF7LQ5H9L4 462 aa9.83□□□□□ -0.84
ERCC8-202ENST00000381118 TTLL11Q8NHH1 800 aa9.83□□□□□ -0.84
ERCC8-202ENST00000381118 CCDC8Q9H0W5 538 aaPredicted RBP9.83□□□□□ -0.84
ERCC8-202ENST00000381118 TAF1P21675 1872 aa9.83□□□□□ -0.84
ERCC8-202ENST00000381118 LAMB2P55268 1798 aa9.83□□□□□ -0.84
ERCC8-202ENST00000381118 IFIT2P09913 472 aaKnown RBP9.83□□□□□ -0.84
ERCC8-202ENST00000381118 ITGA6P23229 1130 aa9.83□□□□□ -0.84
ERCC8-202ENST00000381118 GTF2E1P29083 439 aaPredicted RBP9.83□□□□□ -0.84
ERCC8-202ENST00000381118 EAF2Q96CJ1 260 aaPredicted RBP9.83□□□□□ -0.84
ERCC8-202ENST00000381118 PUS3Q9BZE2 481 aaKnown RBP9.83□□□□□ -0.84
ERCC8-202ENST00000381118 USP42Q9H9J4 1324 aaKnown RBP9.83□□□□□ -0.84
ERCC8-202ENST00000381118 TRIM6-TRIM34B2RNG4 842 aa9.82□□□□□ -0.84
ERCC8-202ENST00000381118 PLSCR1O15162 318 aa9.82□□□□□ -0.84
ERCC8-202ENST00000381118 MAP4K4O95819 1239 aaPredicted RBP9.82□□□□□ -0.84
ERCC8-202ENST00000381118 CSF1RP07333 972 aa9.82□□□□□ -0.84
ERCC8-202ENST00000381118 SDSP20132 328 aa9.82□□□□□ -0.84
ERCC8-202ENST00000381118 CCDC24Q8N4L8 307 aa9.82□□□□□ -0.84
ERCC8-202ENST00000381118 SETDB2Q96T68 719 aa9.82□□□□□ -0.84
ERCC8-202ENST00000381118 OSBPL3Q9H4L5 887 aa9.82□□□□□ -0.84
ERCC8-202ENST00000381118 TLR7Q9NYK1 1049 aaKnown RBP9.82□□□□□ -0.84
ERCC8-202ENST00000381118 MFAP1P55081 439 aaKnown RBP9.82□□□□□ -0.84
ERCC8-202ENST00000381118 ERFEQ4G0M1 354 aa9.82□□□□□ -0.84
ERCC8-202ENST00000381118 CNKSR2Q8WXI2 1034 aa9.82□□□□□ -0.84
ERCC8-202ENST00000381118 RILPL2Q969X0 211 aa9.82□□□□□ -0.84
ERCC8-202ENST00000381118 COL24A1Q17RW2 1714 aa9.81□□□□□ -0.84
ERCC8-202ENST00000381118 ANKRD18BA2A2Z9 1011 aa9.81□□□□□ -0.84
ERCC8-202ENST00000381118 EYA2O00167 538 aa9.81□□□□□ -0.84
ERCC8-202ENST00000381118 NPHP1O15259 732 aa9.81□□□□□ -0.84
ERCC8-202ENST00000381118 ZNF827Q17R98 1081 aa9.81□□□□□ -0.84
ERCC8-202ENST00000381118 ATG9AQ7Z3C6 839 aa9.81□□□□□ -0.84
ERCC8-202ENST00000381118 NBPF5PQ86XG9 351 aaPredicted RBP9.81□□□□□ -0.84
ERCC8-202ENST00000381118 TFCP2L1Q9NZI6 479 aa9.81□□□□□ -0.84
ERCC8-202ENST00000381118 GOLGB1Q14789 3259 aaKnown RBP9.81□□□□□ -0.84
ERCC8-202ENST00000381118 TNNI3KQ59H18 835 aa9.8□□□□□ -0.84
ERCC8-202ENST00000381118 TBC1D9Q6ZT07 1266 aa9.8□□□□□ -0.84
ERCC8-202ENST00000381118 PI4K2BQ8TCG2 481 aa9.8□□□□□ -0.84
ERCC8-202ENST00000381118 STAP2Q9UGK3 403 aa9.8□□□□□ -0.84
ERCC8-202ENST00000381118 FPGT-TNNI3KV9GXZ4 949 aa9.8□□□□□ -0.84
ERCC8-202ENST00000381118 SSFA2P28290 1259 aa9.8□□□□□ -0.84
ERCC8-202ENST00000381118 IL15P40933 162 aaPredicted RBP9.8□□□□□ -0.84
ERCC8-202ENST00000381118 EN1Q05925 392 aaPredicted RBP9.8□□□□□ -0.84
ERCC8-202ENST00000381118 LDHAL6AQ6ZMR3 332 aa9.8□□□□□ -0.84
ERCC8-202ENST00000381118 NEUROD6Q96NK8 337 aa9.8□□□□□ -0.84
ERCC8-202ENST00000381118 SEC31BQ9NQW1 1179 aa9.8□□□□□ -0.84
ERCC8-202ENST00000381118 ABCC12Q96J65 1359 aa9.8□□□□□ -0.84
ERCC8-202ENST00000381118 CDC45O75419 566 aa9.79□□□□□ -0.84
ERCC8-202ENST00000381118 GPATCH3Q96I76 525 aa9.79□□□□□ -0.84
ERCC8-202ENST00000381118 CNNM1Q9NRU3 951 aa9.79□□□□□ -0.84
ERCC8-202ENST00000381118 RGPD3A6NKT7 1758 aaPredicted RBP9.79□□□□□ -0.84
ERCC8-202ENST00000381118 RGPD4Q7Z3J3 1758 aa9.79□□□□□ -0.84
ERCC8-202ENST00000381118 TTC41PQ6P2S7 1318 aa9.79□□□□□ -0.84
ERCC8-202ENST00000381118 GYS1P13807 737 aa9.79□□□□□ -0.84
ERCC8-202ENST00000381118 TIMM10P62072 90 aa9.79□□□□□ -0.84
ERCC8-202ENST00000381118 NFIXQ14938 502 aa9.79□□□□□ -0.84
ERCC8-202ENST00000381118 EZH2Q15910 746 aaKnown RBP9.79□□□□□ -0.84
ERCC8-202ENST00000381118 CCDC152Q4G0S7 254 aa9.79□□□□□ -0.84
ERCC8-202ENST00000381118 C3orf67Q6ZVT6 689 aa9.79□□□□□ -0.84
ERCC8-202ENST00000381118 NYXQ9GZU5 481 aa9.79□□□□□ -0.84
ERCC8-202ENST00000381118 UPF2Q9HAU5 1272 aaKnown RBP9.79□□□□□ -0.84
ERCC8-202ENST00000381118 ECHDC1Q9NTX5 307 aa9.79□□□□□ -0.84
ERCC8-202ENST00000381118 DBNLQ9UJU6 430 aaKnown RBP9.79□□□□□ -0.84
ERCC8-202ENST00000381118 COL4A1P02462 1669 aa9.78□□□□□ -0.84
ERCC8-202ENST00000381118 AOX1Q06278 1338 aa9.78□□□□□ -0.84
ERCC8-202ENST00000381118 ERC2O15083 957 aa9.78□□□□□ -0.84
ERCC8-202ENST00000381118 RGL2O15211 777 aa9.78□□□□□ -0.84
ERCC8-202ENST00000381118 CIAO1O76071 339 aa9.78□□□□□ -0.84
ERCC8-202ENST00000381118 ANP32AP39687 249 aaKnown RBP9.78□□□□□ -0.84
ERCC8-202ENST00000381118 TPTE2Q6XPS3 522 aa9.78□□□□□ -0.84
ERCC8-202ENST00000381118 DBNDD2Q9BQY9 259 aa9.78□□□□□ -0.84
ERCC8-202ENST00000381118 CARMIL3Q8ND23 1372 aa9.78□□□□□ -0.84
ERCC8-202ENST00000381118 GLRX3O76003 335 aaKnown RBP9.78□□□□□ -0.84
ERCC8-202ENST00000381118 HSP90B1P14625 803 aaKnown RBP9.78□□□□□ -0.84
ERCC8-202ENST00000381118 METTL24Q5JXM2 366 aa9.78□□□□□ -0.84
ERCC8-202ENST00000381118 AKT1S1Q96B36 256 aa9.78□□□□□ -0.84
ERCC8-202ENST00000381118 MPHOSPH8Q99549 860 aa9.78□□□□□ -0.84
ERCC8-202ENST00000381118 BOLA2Q9H3K6 86 aa9.78□□□□□ -0.84
ERCC8-202ENST00000381118 CEP126Q9P2H0 1117 aa9.78□□□□□ -0.84
ERCC8-202ENST00000381118 TNRC6CQ9HCJ0 1690 aaKnown RBP9.77□□□□□ -0.85
ERCC8-202ENST00000381118 A0A1B0GUL7 405 aa9.77□□□□□ -0.85
ERCC8-202ENST00000381118 NDUFB9Q9Y6M9 179 aa9.77□□□□□ -0.85
ERCC8-202ENST00000381118 ZNF609O15014 1411 aa9.77□□□□□ -0.85
ERCC8-202ENST00000381118 RIC1Q4ADV7 1423 aa9.77□□□□□ -0.85
ERCC8-202ENST00000381118 SF3B2Q13435 895 aaKnown RBP9.76□□□□□ -0.85
ERCC8-202ENST00000381118 CASC1Q6TDU7 716 aa9.76□□□□□ -0.85
ERCC8-202ENST00000381118 DEFB132Q7Z7B7 95 aa9.76□□□□□ -0.85
ERCC8-202ENST00000381118 COL23A1Q86Y22 540 aaPredicted RBP9.76□□□□□ -0.85
ERCC8-202ENST00000381118 CNTROBQ8N137 903 aa9.76□□□□□ -0.85
ERCC8-202ENST00000381118 HELBQ8NG08 1087 aaPredicted RBP9.76□□□□□ -0.85
ERCC8-202ENST00000381118 RIPOR2Q9Y4F9 1068 aa9.76□□□□□ -0.85
ERCC8-202ENST00000381118 IGHMBP2P38935 993 aaKnown RBP9.76□□□□□ -0.85
ERCC8-202ENST00000381118 CNBD1Q8NA66 436 aa9.76□□□□□ -0.85
ERCC8-202ENST00000381118 NLRP3Q96P20 1036 aa9.76□□□□□ -0.85
ERCC8-202ENST00000381118 FBXO3Q9UK99 471 aa9.76□□□□□ -0.85
ERCC8-202ENST00000381118 HMGB2P26583 209 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms