RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 RASEFQ8IZ41 740 aa14.78□□□□□ -0.04
CDX2-201ENST00000381020 STAP2Q9UGK3 403 aa14.78□□□□□ -0.04
CDX2-201ENST00000381020 CEP170BQ9Y4F5 1589 aaPredicted RBP14.78□□□□□ -0.04
CDX2-201ENST00000381020 ZSCAN25Q6NSZ9 544 aa14.78□□□□□ -0.04
CDX2-201ENST00000381020 NUP133Q8WUM0 1156 aa14.78□□□□□ -0.04
CDX2-201ENST00000381020 SEC62Q99442 399 aaKnown RBP14.78□□□□□ -0.04
CDX2-201ENST00000381020 UBAP1LF5GYI3 381 aa14.78□□□□□ -0.04
CDX2-201ENST00000381020 EPHA10Q5JZY3 1008 aa14.78□□□□□ -0.04
CDX2-201ENST00000381020 RASSF8Q8NHQ8 419 aa14.78□□□□□ -0.04
CDX2-201ENST00000381020 NIP7Q9Y221 180 aaKnown RBP eCLIP14.78□□□□□ -0.04
CDX2-201ENST00000381020 MINDY4BA8MYZ0 360 aa14.77□□□□□ -0.04
CDX2-201ENST00000381020 ZNF213O14771 459 aa14.77□□□□□ -0.04
CDX2-201ENST00000381020 HSPA4P34932 840 aa14.77□□□□□ -0.04
CDX2-201ENST00000381020 CCDC191Q8NCU4 936 aa14.77□□□□□ -0.04
CDX2-201ENST00000381020 A0A0D9SFI3 127 aa14.77□□□□□ -0.04
CDX2-201ENST00000381020 FAM43AQ8N2R8 423 aa14.77□□□□□ -0.04
CDX2-201ENST00000381020 WDR17Q8IZU2 1322 aa14.77□□□□□ -0.04
CDX2-201ENST00000381020 DHX16O60231 1041 aaKnown RBP14.77□□□□□ -0.05
CDX2-201ENST00000381020 STK38Q15208 465 aa14.77□□□□□ -0.05
CDX2-201ENST00000381020 ZSCAN23Q3MJ62 389 aa14.77□□□□□ -0.05
CDX2-201ENST00000381020 GNL3LQ9NVN8 582 aaKnown RBP14.77□□□□□ -0.05
CDX2-201ENST00000381020 LMTK3Q96Q04 1460 aa14.77□□□□□ -0.05
CDX2-201ENST00000381020 ERVV-2B6SEH9 535 aa14.77□□□□□ -0.05
CDX2-201ENST00000381020 RAD21O60216 631 aa14.77□□□□□ -0.05
CDX2-201ENST00000381020 ZSCAN22P10073 491 aaPredicted RBP14.77□□□□□ -0.05
CDX2-201ENST00000381020 LRRC24Q50LG9 513 aa14.77□□□□□ -0.05
CDX2-201ENST00000381020 Q6ZUG5 572 aa14.77□□□□□ -0.05
CDX2-201ENST00000381020 USP48Q86UV5 1035 aa14.77□□□□□ -0.05
CDX2-201ENST00000381020 SASH1O94885 1247 aa14.76□□□□□ -0.05
CDX2-201ENST00000381020 DNM1Q05193 864 aaKnown RBP14.76□□□□□ -0.05
CDX2-201ENST00000381020 FAM173BQ6P4H8 233 aa14.76□□□□□ -0.05
CDX2-201ENST00000381020 CCDC144CPQ8IYA2 1237 aa14.76□□□□□ -0.05
CDX2-201ENST00000381020 ANO8Q9HCE9 1232 aaPredicted RBP14.76□□□□□ -0.05
CDX2-201ENST00000381020 AOX1Q06278 1338 aa14.76□□□□□ -0.05
CDX2-201ENST00000381020 SYT1P21579 422 aa14.76□□□□□ -0.05
CDX2-201ENST00000381020 SLC9C2Q5TAH2 1124 aa14.76□□□□□ -0.05
CDX2-201ENST00000381020 SPC24Q8NBT2 197 aa14.76□□□□□ -0.05
CDX2-201ENST00000381020 NACAP1Q9BZK3 213 aa14.76□□□□□ -0.05
CDX2-201ENST00000381020 TNMDQ9H2S6 317 aa14.76□□□□□ -0.05
CDX2-201ENST00000381020 NRDCO43847 1150 aa14.76□□□□□ -0.05
CDX2-201ENST00000381020 SART3Q15020 963 aaKnown RBP14.76□□□□□ -0.05
CDX2-201ENST00000381020 NOL10Q9BSC4 688 aaKnown RBP14.76□□□□□ -0.05
CDX2-201ENST00000381020 NAPBQ9H115 298 aa14.76□□□□□ -0.05
CDX2-201ENST00000381020 ZNF652Q9Y2D9 606 aa14.76□□□□□ -0.05
CDX2-201ENST00000381020 C1orf167Q5SNV9 1468 aa14.75□□□□□ -0.05
CDX2-201ENST00000381020 KINO60870 393 aaKnown RBP14.75□□□□□ -0.05
CDX2-201ENST00000381020 CCDC173Q0VFZ6 552 aa14.75□□□□□ -0.05
CDX2-201ENST00000381020 POLA2Q14181 598 aa14.75□□□□□ -0.05
CDX2-201ENST00000381020 SAFBQ15424 915 aaKnown RBP eCLIP14.75□□□□□ -0.05
CDX2-201ENST00000381020 RUFY3Q7L099 469 aa14.75□□□□□ -0.05
CDX2-201ENST00000381020 HMG20BQ9P0W2 317 aa14.75□□□□□ -0.05
CDX2-201ENST00000381020 DBNLQ9UJU6 430 aaKnown RBP14.75□□□□□ -0.05
CDX2-201ENST00000381020 ESPNB1AK53 854 aa14.75□□□□□ -0.05
CDX2-201ENST00000381020 SLC27A2O14975 620 aa14.75□□□□□ -0.05
CDX2-201ENST00000381020 ZPR1O75312 459 aa14.75□□□□□ -0.05
CDX2-201ENST00000381020 CKAP2LQ8IYA6 745 aa14.75□□□□□ -0.05
CDX2-201ENST00000381020 PUS3Q9BZE2 481 aaKnown RBP14.75□□□□□ -0.05
CDX2-201ENST00000381020 SLC5A1P13866 664 aa14.74□□□□□ -0.05
CDX2-201ENST00000381020 ITGA6P23229 1130 aa14.74□□□□□ -0.05
CDX2-201ENST00000381020 PIBF1Q8WXW3 757 aa14.74□□□□□ -0.05
CDX2-201ENST00000381020 MAP3K12Q12852 859 aa14.74□□□□□ -0.05
CDX2-201ENST00000381020 CARD10Q9BWT7 1032 aa14.74□□□□□ -0.05
CDX2-201ENST00000381020 ADCK5Q3MIX3 580 aa14.74□□□□□ -0.05
CDX2-201ENST00000381020 GLIPR1L2Q4G1C9 344 aa14.74□□□□□ -0.05
CDX2-201ENST00000381020 PI4K2BQ8TCG2 481 aa14.74□□□□□ -0.05
CDX2-201ENST00000381020 ADCY9O60503 1353 aa14.74□□□□□ -0.05
CDX2-201ENST00000381020 USP32Q8NFA0 1604 aa14.73□□□□□ -0.05
CDX2-201ENST00000381020 GOLGA8BA8MQT2 603 aa14.73□□□□□ -0.05
CDX2-201ENST00000381020 TCIRG1Q13488 830 aa14.73□□□□□ -0.05
CDX2-201ENST00000381020 KIF2CQ99661 725 aa14.73□□□□□ -0.05
CDX2-201ENST00000381020 SHPRHQ149N8 1683 aa14.73□□□□□ -0.05
CDX2-201ENST00000381020 CCDC24Q8N4L8 307 aa14.73□□□□□ -0.05
CDX2-201ENST00000381020 NUP62CLQ9H1M0 184 aa14.73□□□□□ -0.05
CDX2-201ENST00000381020 INTS4Q96HW7 963 aaKnown RBP14.73□□□□□ -0.05
CDX2-201ENST00000381020 ATP10DQ9P241 1426 aa14.73□□□□□ -0.05
CDX2-201ENST00000381020 CCDC69A6NI79 296 aa14.72□□□□□ -0.05
CDX2-201ENST00000381020 APOBRQ0VD83 1088 aa14.72□□□□□ -0.05
CDX2-201ENST00000381020 SLC4A8Q2Y0W8 1093 aa14.72□□□□□ -0.05
CDX2-201ENST00000381020 VPS53Q5VIR6 699 aa14.72□□□□□ -0.05
CDX2-201ENST00000381020 XAGE2Q96GT9 111 aa14.72□□□□□ -0.05
CDX2-201ENST00000381020 TRIM5Q9C035 493 aa14.72□□□□□ -0.05
CDX2-201ENST00000381020 HMGB1P09429 215 aaKnown RBP14.72□□□□□ -0.05
CDX2-201ENST00000381020 GIMAP6Q6P9H5 292 aa14.72□□□□□ -0.05
CDX2-201ENST00000381020 MICU3Q86XE3 530 aa14.72□□□□□ -0.05
CDX2-201ENST00000381020 TOM1O60784 492 aa14.72□□□□□ -0.05
CDX2-201ENST00000381020 TAF5LO75529 589 aa14.72□□□□□ -0.05
CDX2-201ENST00000381020 CCDC192P0DO97 292 aa14.72□□□□□ -0.05
CDX2-201ENST00000381020 ZNF396Q96N95 335 aaPredicted RBP14.72□□□□□ -0.05
CDX2-201ENST00000381020 NRKQ7Z2Y5 1582 aa14.72□□□□□ -0.05
CDX2-201ENST00000381020 RNF113AO15541 343 aaKnown RBP14.71□□□□□ -0.05
CDX2-201ENST00000381020 F13A1P00488 732 aa14.71□□□□□ -0.05
CDX2-201ENST00000381020 FAM98CQ17RN3 349 aaKnown RBP14.71□□□□□ -0.05
CDX2-201ENST00000381020 DNAJC5Q9H3Z4 198 aa14.71□□□□□ -0.05
CDX2-201ENST00000381020 POLR3DP05423 398 aaPredicted RBP14.71□□□□□ -0.05
CDX2-201ENST00000381020 KCNQ4P56696 695 aa14.71□□□□□ -0.05
CDX2-201ENST00000381020 TPM4P67936 248 aa14.71□□□□□ -0.05
CDX2-201ENST00000381020 KBTBD3Q8NAB2 608 aa14.71□□□□□ -0.05
CDX2-201ENST00000381020 COPRSQ9NQ92 184 aa14.71□□□□□ -0.05
CDX2-201ENST00000381020 CFAP45Q9UL16 551 aa14.71□□□□□ -0.05
CDX2-201ENST00000381020 PTPN12Q05209 780 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms