RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 HDXQ7Z353 690 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 IFT74Q96LB3 600 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 PSMC4P43686 418 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 AFAP1L1Q8TED9 768 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 GOLGA1Q92805 767 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 HOMER2Q9NSB8 354 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 AQRO60306 1485 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLCN4-202ENST00000380833 ATP5J2-PTCD1G3V325 749 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 CFAP100Q494V2 611 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 SH3GL3Q99963 347 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 PRPF4BQ13523 1007 aaKnown RBP12.29□□□□□ -0.44
CLCN4-202ENST00000380833 NEDD9Q14511 834 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 NAPBQ9H115 298 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 A6NNZ2 444 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 CASQ2O14958 399 aaPredicted RBP12.29□□□□□ -0.44
CLCN4-202ENST00000380833 TUBB8Q3ZCM7 444 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 GRIPAP1Q4V328 841 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 CCDC150Q8NCX0 1101 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 PRG4Q92954 1404 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-202ENST00000380833 MAP3K7CLP57077 242 aa12.28□□□□□ -0.44
CLCN4-202ENST00000380833 SATB1Q01826 763 aa12.28□□□□□ -0.44
CLCN4-202ENST00000380833 PROCA1Q8NCQ7 364 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-202ENST00000380833 CSPG5O95196 566 aa12.28□□□□□ -0.44
CLCN4-202ENST00000380833 CACNA2D4Q7Z3S7 1137 aa12.28□□□□□ -0.44
CLCN4-202ENST00000380833 KLHL40Q2TBA0 621 aa12.28□□□□□ -0.44
CLCN4-202ENST00000380833 GJC1P36383 396 aa12.28□□□□□ -0.44
CLCN4-202ENST00000380833 HAND2P61296 217 aa12.28□□□□□ -0.44
CLCN4-202ENST00000380833 TNPO1Q92973 898 aaKnown RBP12.28□□□□□ -0.44
CLCN4-202ENST00000380833 LARP1Q6PKG0 1096 aaKnown RBP12.27□□□□□ -0.44
CLCN4-202ENST00000380833 CWC25Q9NXE8 425 aaPredicted RBP12.27□□□□□ -0.44
CLCN4-202ENST00000380833 F6X3S4 739 aa12.27□□□□□ -0.44
CLCN4-202ENST00000380833 IFIT1P09914 478 aaKnown RBP12.27□□□□□ -0.44
CLCN4-202ENST00000380833 ZSCAN23Q3MJ62 389 aa12.27□□□□□ -0.44
CLCN4-202ENST00000380833 LRSAM1Q6UWE0 723 aa12.27□□□□□ -0.44
CLCN4-202ENST00000380833 LRRD1A4D1F6 860 aa12.27□□□□□ -0.45
CLCN4-202ENST00000380833 ZBTB21Q9ULJ3 1066 aa12.27□□□□□ -0.45
CLCN4-202ENST00000380833 NLRP5P59047 1200 aa12.27□□□□□ -0.45
CLCN4-202ENST00000380833 CEP85LQ5SZL2 805 aa12.27□□□□□ -0.45
CLCN4-202ENST00000380833 PRPF40BQ6NWY9 871 aaKnown RBP12.27□□□□□ -0.45
CLCN4-202ENST00000380833 SYCP3Q8IZU3 236 aa12.27□□□□□ -0.45
CLCN4-202ENST00000380833 VCX3BQ9H321 246 aa12.27□□□□□ -0.45
CLCN4-202ENST00000380833 CETN3O15182 167 aa12.27□□□□□ -0.45
CLCN4-202ENST00000380833 CREB3O43889 395 aa12.27□□□□□ -0.45
CLCN4-202ENST00000380833 TOP1P11387 765 aaKnown RBP12.27□□□□□ -0.45
CLCN4-202ENST00000380833 ERO1AQ96HE7 468 aa12.27□□□□□ -0.45
CLCN4-202ENST00000380833 TDRD12Q587J7 1177 aaKnown RBP12.26□□□□□ -0.45
CLCN4-202ENST00000380833 RAB3IL1Q8TBN0 382 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 RTEL1-TNFRSF6BF6WH68 1400 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 CHMP2AO43633 222 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 PABPN1LA6NDY0 278 aaKnown RBP12.26□□□□□ -0.45
CLCN4-202ENST00000380833 PPP2R1AP30153 589 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 RANBP1P43487 201 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 CKAP4Q07065 602 aaKnown RBP12.26□□□□□ -0.45
CLCN4-202ENST00000380833 MCTP2Q6DN12 878 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 RIMBP2O15034 1052 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 PRC1O43663 620 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 VCX3AQ9NNX9 186 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 PRKG1Q13976 671 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 ARMC9Q7Z3E5 817 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 STMN2Q93045 179 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 ZNF830Q96NB3 372 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-202ENST00000380833 ANO10Q9NW15 660 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 UBAP1LF5GYI3 381 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 CPLX4Q7Z7G2 160 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 GOLGA5Q8TBA6 731 aa12.26□□□□□ -0.45
CLCN4-202ENST00000380833 TUBBP07437 444 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 RFX1P22670 979 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 GJA3Q9Y6H8 435 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 FRMD3A2A2Y4 597 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 CCDC12Q8WUD4 166 aaPredicted RBP12.25□□□□□ -0.45
CLCN4-202ENST00000380833 TRIM7Q9C029 511 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 GMNNO75496 209 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 STMN1P16949 149 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 IRX1P78414 480 aaPredicted RBP12.25□□□□□ -0.45
CLCN4-202ENST00000380833 CTAGE6Q86UF2 777 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 ARFGAP2Q8N6H7 521 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 TRIM35Q9UPQ4 493 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 CTAGE15A4D2H0 777 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 CTAGE8P0CG41 777 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 IDEP14735 1019 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 CCT4P50991 539 aaKnown RBP12.25□□□□□ -0.45
CLCN4-202ENST00000380833 IFIT5Q13325 482 aaKnown RBP12.25□□□□□ -0.45
CLCN4-202ENST00000380833 HLTFQ14527 1009 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLCN4-202ENST00000380833 SPA17Q15506 151 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 CCDC129Q6ZRS4 1044 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 RUFY3Q7L099 469 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 APBB1IPQ7Z5R6 666 aaPredicted RBP12.25□□□□□ -0.45
CLCN4-202ENST00000380833 CTAGE4Q8IX94 777 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 SAMD15Q9P1V8 674 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 GNAT3A8MTJ3 354 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 SESN3P58005 492 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 USH1CQ9Y6N9 552 aa12.25□□□□□ -0.45
CLCN4-202ENST00000380833 CDKL5O76039 1030 aa12.24□□□□□ -0.45
CLCN4-202ENST00000380833 ZEB2O60315 1214 aa12.24□□□□□ -0.45
CLCN4-202ENST00000380833 LRRC43Q8N309 656 aa12.24□□□□□ -0.45
CLCN4-202ENST00000380833 FAF1Q9UNN5 650 aaPredicted RBP12.24□□□□□ -0.45
CLCN4-202ENST00000380833 EXOC5O00471 708 aa12.24□□□□□ -0.45
CLCN4-202ENST00000380833 GNG11P61952 73 aa12.24□□□□□ -0.45
CLCN4-202ENST00000380833 NUCB1Q02818 461 aa12.24□□□□□ -0.45
CLCN4-202ENST00000380833 TTC14Q96N46 770 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms