RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 UQCRHP07919 91 aa19.39■□□□□ 0.69
VPS16-203ENST00000380469 TFCP2Q12800 502 aa19.39■□□□□ 0.69
VPS16-203ENST00000380469 SASS6Q6UVJ0 657 aa19.39■□□□□ 0.69
VPS16-203ENST00000380469 PDCL3Q9H2J4 239 aa19.39■□□□□ 0.69
VPS16-203ENST00000380469 KIF1AQ12756 1690 aa19.38■□□□□ 0.69
VPS16-203ENST00000380469 PTPN12Q05209 780 aaKnown RBP19.38■□□□□ 0.69
VPS16-203ENST00000380469 USPL1Q5W0Q7 1092 aa19.38■□□□□ 0.69
VPS16-203ENST00000380469 EDC3Q96F86 508 aaKnown RBP19.38■□□□□ 0.69
VPS16-203ENST00000380469 FMNL2Q96PY5 1086 aa19.38■□□□□ 0.69
VPS16-203ENST00000380469 SCAND2PQ9GZW5 306 aaPredicted RBP19.38■□□□□ 0.69
VPS16-203ENST00000380469 DBNLQ9UJU6 430 aaKnown RBP19.38■□□□□ 0.69
VPS16-203ENST00000380469 USP16Q9Y5T5 823 aa19.38■□□□□ 0.69
VPS16-203ENST00000380469 CSB-PGBD3P0DP91 1061 aa19.37■□□□□ 0.69
VPS16-203ENST00000380469 RFX5P48382 616 aaPredicted RBP19.37■□□□□ 0.69
VPS16-203ENST00000380469 PLCB2Q00722 1185 aa19.37■□□□□ 0.69
VPS16-203ENST00000380469 TTC6Q86TZ1 520 aa19.37■□□□□ 0.69
VPS16-203ENST00000380469 JARID2Q92833 1246 aaPredicted RBP19.37■□□□□ 0.69
VPS16-203ENST00000380469 C1orf167Q5SNV9 1468 aa19.37■□□□□ 0.69
VPS16-203ENST00000380469 MST1RQ04912 1400 aa19.37■□□□□ 0.69
VPS16-203ENST00000380469 GOLGA6L4A6NEF3 574 aa19.37■□□□□ 0.69
VPS16-203ENST00000380469 STK3Q13188 491 aa19.37■□□□□ 0.69
VPS16-203ENST00000380469 COL9A3Q14050 684 aaPredicted RBP19.37■□□□□ 0.69
VPS16-203ENST00000380469 UBE3BQ7Z3V4 1068 aa19.37■□□□□ 0.69
VPS16-203ENST00000380469 DCAF5Q96JK2 942 aa19.37■□□□□ 0.69
VPS16-203ENST00000380469 C19orf44Q9H6X5 657 aa19.37■□□□□ 0.69
VPS16-203ENST00000380469 TAF6LQ9Y6J9 622 aa19.37■□□□□ 0.69
VPS16-203ENST00000380469 MPNDQ8N594 471 aa19.36■□□□□ 0.69
VPS16-203ENST00000380469 NEK1Q96PY6 1258 aa19.36■□□□□ 0.69
VPS16-203ENST00000380469 U3KPZ7 1027 aaPredicted RBP19.36■□□□□ 0.69
VPS16-203ENST00000380469 RABL6Q3YEC7 729 aaPredicted RBP19.36■□□□□ 0.69
VPS16-203ENST00000380469 DNTTIP2Q5QJE6 756 aaKnown RBP19.36■□□□□ 0.69
VPS16-203ENST00000380469 LRP10Q7Z4F1 713 aa19.36■□□□□ 0.69
VPS16-203ENST00000380469 PIBF1Q8WXW3 757 aa19.36■□□□□ 0.69
VPS16-203ENST00000380469 ZNF830Q96NB3 372 aaPredicted RBP19.36■□□□□ 0.69
VPS16-203ENST00000380469 RFX7Q2KHR2 1363 aa19.35■□□□□ 0.69
VPS16-203ENST00000380469 MAP3K11Q16584 847 aa19.35■□□□□ 0.69
VPS16-203ENST00000380469 DNAJC2Q99543 621 aaKnown RBP19.35■□□□□ 0.69
VPS16-203ENST00000380469 NUP62CLQ9H1M0 184 aa19.35■□□□□ 0.69
VPS16-203ENST00000380469 COL15A1P39059 1388 aa19.35■□□□□ 0.69
VPS16-203ENST00000380469 A0A087WZG4 1122 aa19.35■□□□□ 0.69
VPS16-203ENST00000380469 PIP4K2AP48426 406 aaPredicted RBP19.35■□□□□ 0.69
VPS16-203ENST00000380469 SPATA32Q96LK8 384 aa19.35■□□□□ 0.69
VPS16-203ENST00000380469 CHMP3Q9Y3E7 222 aa19.35■□□□□ 0.69
VPS16-203ENST00000380469 MCMDC2Q4G0Z9 681 aa19.34■□□□□ 0.69
VPS16-203ENST00000380469 FAM173BQ6P4H8 233 aa19.34■□□□□ 0.69
VPS16-203ENST00000380469 HAUS7Q99871 368 aa19.34■□□□□ 0.69
VPS16-203ENST00000380469 ATP5J2-PTCD1G3V325 749 aa19.34■□□□□ 0.69
VPS16-203ENST00000380469 DYNC1I1O14576 645 aa19.34■□□□□ 0.69
VPS16-203ENST00000380469 PTCD1O75127 700 aaKnown RBP19.34■□□□□ 0.69
VPS16-203ENST00000380469 TPM3P06753 285 aa19.33■□□□□ 0.69
VPS16-203ENST00000380469 CABP4P57796 275 aa19.33■□□□□ 0.69
VPS16-203ENST00000380469 NOLC1Q14978 699 aaKnown RBP eCLIP19.33■□□□□ 0.69
VPS16-203ENST00000380469 GTF3C6Q969F1 213 aa19.33■□□□□ 0.69
VPS16-203ENST00000380469 DBNDD2Q9BQY9 259 aa19.33■□□□□ 0.69
VPS16-203ENST00000380469 TTC12Q9H892 705 aaPredicted RBP19.33■□□□□ 0.69
VPS16-203ENST00000380469 MEGF6O75095 1541 aa19.33■□□□□ 0.68
VPS16-203ENST00000380469 HSP90B1P14625 803 aaKnown RBP19.33■□□□□ 0.68
VPS16-203ENST00000380469 LIG1P18858 919 aa19.33■□□□□ 0.68
VPS16-203ENST00000380469 RBM10P98175 930 aaKnown RBP19.33■□□□□ 0.68
VPS16-203ENST00000380469 PLBD2Q8NHP8 589 aa19.33■□□□□ 0.68
VPS16-203ENST00000380469 TFIP11Q9UBB9 837 aaKnown RBP19.33■□□□□ 0.68
VPS16-203ENST00000380469 AFDNP55196 1824 aaKnown RBP19.32■□□□□ 0.68
VPS16-203ENST00000380469 Q6ZUG5 572 aa19.32■□□□□ 0.68
VPS16-203ENST00000380469 ALS2Q96Q42 1657 aa19.32■□□□□ 0.68
VPS16-203ENST00000380469 CAMK4Q16566 473 aa19.31■□□□□ 0.68
VPS16-203ENST00000380469 FAM200AQ8TCP9 573 aa19.31■□□□□ 0.68
VPS16-203ENST00000380469 LEO1Q8WVC0 666 aaPredicted RBP19.31■□□□□ 0.68
VPS16-203ENST00000380469 MAP7D2Q96T17 732 aa19.31■□□□□ 0.68
VPS16-203ENST00000380469 TNMDQ9H2S6 317 aa19.31■□□□□ 0.68
VPS16-203ENST00000380469 DDX19AQ9NUU7 478 aaKnown RBP19.31■□□□□ 0.68
VPS16-203ENST00000380469 FAM13BQ9NYF5 915 aa19.31■□□□□ 0.68
VPS16-203ENST00000380469 NDUFB9Q9Y6M9 179 aa19.31■□□□□ 0.68
VPS16-203ENST00000380469 GOLGA6L6A8MZA4 724 aa19.31■□□□□ 0.68
VPS16-203ENST00000380469 CYP27B1O15528 508 aa19.31■□□□□ 0.68
VPS16-203ENST00000380469 CCDC129Q6ZRS4 1044 aa19.31■□□□□ 0.68
VPS16-203ENST00000380469 PLEKHG2Q9H7P9 1386 aa19.31■□□□□ 0.68
VPS16-203ENST00000380469 ZNF609O15014 1411 aa19.31■□□□□ 0.68
VPS16-203ENST00000380469 H3BQV1 296 aa19.3■□□□□ 0.68
VPS16-203ENST00000380469 ATF3P18847 181 aa19.3■□□□□ 0.68
VPS16-203ENST00000380469 FGD1P98174 961 aa19.3■□□□□ 0.68
VPS16-203ENST00000380469 IFFO2Q5TF58 517 aa19.3■□□□□ 0.68
VPS16-203ENST00000380469 LMBR1LQ6UX01 489 aa19.3■□□□□ 0.68
VPS16-203ENST00000380469 DACT1Q9NYF0 836 aa19.3■□□□□ 0.68
VPS16-203ENST00000380469 ABCC6O95255 1503 aa19.3■□□□□ 0.68
VPS16-203ENST00000380469 TYRO3Q06418 890 aa19.3■□□□□ 0.68
VPS16-203ENST00000380469 DDX46Q7L014 1031 aaKnown RBP19.3■□□□□ 0.68
VPS16-203ENST00000380469 KBTBD3Q8NAB2 608 aa19.3■□□□□ 0.68
VPS16-203ENST00000380469 SEC62Q99442 399 aaKnown RBP19.3■□□□□ 0.68
VPS16-203ENST00000380469 CYP21A2P08686 494 aa19.29■□□□□ 0.68
VPS16-203ENST00000380469 HMGB1P09429 215 aaKnown RBP19.29■□□□□ 0.68
VPS16-203ENST00000380469 JAK2O60674 1132 aa19.29■□□□□ 0.68
VPS16-203ENST00000380469 CASP7P55210 303 aa19.29■□□□□ 0.68
VPS16-203ENST00000380469 ZSCAN16Q9H4T2 348 aaPredicted RBP19.29■□□□□ 0.68
VPS16-203ENST00000380469 AP5Z1O43299 807 aa19.28■□□□□ 0.68
VPS16-203ENST00000380469 BRF1Q92994 677 aa19.28■□□□□ 0.68
VPS16-203ENST00000380469 NEUROD6Q96NK8 337 aa19.28■□□□□ 0.68
VPS16-203ENST00000380469 MRVI1Q9Y6F6 885 aa19.28■□□□□ 0.68
VPS16-203ENST00000380469 ARFGEF2Q9Y6D5 1785 aa19.28■□□□□ 0.68
VPS16-203ENST00000380469 SH3TC1Q8TE82 1336 aa19.28■□□□□ 0.68
VPS16-203ENST00000380469 PRIMPOLQ96LW4 560 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms