RNA–Protein interactions for RNA: ENST00000380340.8

APH1B-202, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1B, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-202ENST00000380340 SHTN1A0MZ66 631 aa13.84□□□□□ -0.19
APH1B-202ENST00000380340 ERVV-1B6SEH8 477 aa13.84□□□□□ -0.19
APH1B-202ENST00000380340 MKI67P46013 3256 aaKnown RBP13.84□□□□□ -0.19
APH1B-202ENST00000380340 NOM1Q5C9Z4 860 aaKnown RBP13.83□□□□□ -0.2
APH1B-202ENST00000380340 SAMD7Q7Z3H4 446 aa13.83□□□□□ -0.2
APH1B-202ENST00000380340 SIPA1L3O60292 1781 aaPredicted RBP13.83□□□□□ -0.2
APH1B-202ENST00000380340 IBTKQ9P2D0 1353 aaPredicted RBP13.83□□□□□ -0.2
APH1B-202ENST00000380340 ADM5C9JUS6 153 aa13.82□□□□□ -0.2
APH1B-202ENST00000380340 BBOX1O75936 387 aa13.82□□□□□ -0.2
APH1B-202ENST00000380340 TBC1D10BQ4KMP7 808 aaPredicted RBP13.82□□□□□ -0.2
APH1B-202ENST00000380340 SP8Q8IXZ3 490 aa13.82□□□□□ -0.2
APH1B-202ENST00000380340 MPNDQ8N594 471 aa13.82□□□□□ -0.2
APH1B-202ENST00000380340 NLRP3Q96P20 1036 aa13.82□□□□□ -0.2
APH1B-202ENST00000380340 A0A0C4DFX4 3053 aa13.82□□□□□ -0.2
APH1B-202ENST00000380340 TBC1D8O95759 1140 aa13.81□□□□□ -0.2
APH1B-202ENST00000380340 RASAL3Q86YV0 1011 aa13.81□□□□□ -0.2
APH1B-202ENST00000380340 SULF1Q8IWU6 871 aa13.81□□□□□ -0.2
APH1B-202ENST00000380340 GPR25O00155 361 aa13.8□□□□□ -0.2
APH1B-202ENST00000380340 DLL1O00548 723 aa13.8□□□□□ -0.2
APH1B-202ENST00000380340 GPTP24298 496 aa13.8□□□□□ -0.2
APH1B-202ENST00000380340 FKBP1BP68106 108 aa13.8□□□□□ -0.2
APH1B-202ENST00000380340 SUSD4Q5VX71 490 aa13.8□□□□□ -0.2
APH1B-202ENST00000380340 INTS3Q68E01 1043 aaKnown RBP13.8□□□□□ -0.2
APH1B-202ENST00000380340 C3orf67Q6ZVT6 689 aa13.8□□□□□ -0.2
APH1B-202ENST00000380340 ZBTB12Q9Y330 459 aaPredicted RBP13.8□□□□□ -0.2
APH1B-202ENST00000380340 YDJCA8MPS7 323 aa13.79□□□□□ -0.2
APH1B-202ENST00000380340 RPS12P25398 132 aaKnown RBP13.79□□□□□ -0.2
APH1B-202ENST00000380340 RBM26Q5T8P6 1007 aaKnown RBP13.79□□□□□ -0.2
APH1B-202ENST00000380340 KIF6Q6ZMV9 814 aa13.79□□□□□ -0.2
APH1B-202ENST00000380340 MAP3K15Q6ZN16 1313 aa13.79□□□□□ -0.2
APH1B-202ENST00000380340 U2SURPO15042 1029 aaKnown RBP13.78□□□□□ -0.2
APH1B-202ENST00000380340 NTSR2O95665 410 aa13.78□□□□□ -0.2
APH1B-202ENST00000380340 EGFRP00533 1210 aa13.78□□□□□ -0.2
APH1B-202ENST00000380340 SLC10A5Q5PT55 438 aa13.78□□□□□ -0.2
APH1B-202ENST00000380340 PPP1R42Q7Z4L9 355 aa13.78□□□□□ -0.2
APH1B-202ENST00000380340 NGEFQ8N5V2 710 aa13.78□□□□□ -0.2
APH1B-202ENST00000380340 CDCA5Q96FF9 252 aa13.78□□□□□ -0.2
APH1B-202ENST00000380340 ABCC4O15439 1325 aa13.78□□□□□ -0.2
APH1B-202ENST00000380340 UBN2Q6ZU65 1347 aa13.78□□□□□ -0.2
APH1B-202ENST00000380340 PSMD14O00487 310 aa13.77□□□□□ -0.21
APH1B-202ENST00000380340 FKTNO75072 461 aa13.77□□□□□ -0.21
APH1B-202ENST00000380340 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
APH1B-202ENST00000380340 TM4SF4P48230 202 aa13.77□□□□□ -0.21
APH1B-202ENST00000380340 AMER1Q5JTC6 1135 aaPredicted RBP13.77□□□□□ -0.21
APH1B-202ENST00000380340 ZNF34Q8IZ26 560 aa13.77□□□□□ -0.21
APH1B-202ENST00000380340 PARP10Q53GL7 1025 aa13.76□□□□□ -0.21
APH1B-202ENST00000380340 RTF1Q92541 710 aaKnown RBP13.76□□□□□ -0.21
APH1B-202ENST00000380340 GGA3Q9NZ52 723 aa13.76□□□□□ -0.21
APH1B-202ENST00000380340 COLQQ9Y215 455 aaPredicted RBP13.76□□□□□ -0.21
APH1B-202ENST00000380340 HTTP42858 3142 aa13.76□□□□□ -0.21
APH1B-202ENST00000380340 POTEFA5A3E0 1075 aa13.75□□□□□ -0.21
APH1B-202ENST00000380340 KIF4BQ2VIQ3 1234 aa13.75□□□□□ -0.21
APH1B-202ENST00000380340 TTLL7Q6ZT98 887 aa13.75□□□□□ -0.21
APH1B-202ENST00000380340 PHACTR3Q96KR7 559 aa13.75□□□□□ -0.21
APH1B-202ENST00000380340 ZBTB3Q9H5J0 574 aa13.75□□□□□ -0.21
APH1B-202ENST00000380340 WASHC4Q2M389 1173 aa13.74□□□□□ -0.21
APH1B-202ENST00000380340 DDX46Q7L014 1031 aaKnown RBP13.74□□□□□ -0.21
APH1B-202ENST00000380340 TMC4Q7Z404 712 aa13.74□□□□□ -0.21
APH1B-202ENST00000380340 SLC17A8Q8NDX2 589 aa13.74□□□□□ -0.21
APH1B-202ENST00000380340 UTP14AQ9BVJ6 771 aaKnown RBP13.74□□□□□ -0.21
APH1B-202ENST00000380340 CFHR5Q9BXR6 569 aa13.74□□□□□ -0.21
APH1B-202ENST00000380340 SZT2Q5T011 3432 aa13.74□□□□□ -0.21
APH1B-202ENST00000380340 SREBF2Q12772 1141 aa13.73□□□□□ -0.21
APH1B-202ENST00000380340 GIGYF2Q6Y7W6 1299 aaKnown RBP13.73□□□□□ -0.21
APH1B-202ENST00000380340 MCM10Q7L590 875 aa13.73□□□□□ -0.21
APH1B-202ENST00000380340 RRP7AQ9Y3A4 280 aaKnown RBP13.73□□□□□ -0.21
APH1B-202ENST00000380340 GRAPQ13588 217 aa13.72□□□□□ -0.21
APH1B-202ENST00000380340 TAF7Q15545 349 aaPredicted RBP13.72□□□□□ -0.21
APH1B-202ENST00000380340 GRAPLQ8TC17 118 aaPredicted RBP13.72□□□□□ -0.21
APH1B-202ENST00000380340 DBNDD1Q9H9R9 158 aa13.72□□□□□ -0.21
APH1B-202ENST00000380340 U3KPZ7 1027 aaPredicted RBP13.72□□□□□ -0.21
APH1B-202ENST00000380340 CUL9Q8IWT3 2517 aa13.71□□□□□ -0.21
APH1B-202ENST00000380340 ASTN2O75129 1339 aaPredicted RBP13.71□□□□□ -0.21
APH1B-202ENST00000380340 POLR2AP24928 1970 aaKnown RBP13.71□□□□□ -0.21
APH1B-202ENST00000380340 UBE2Q2LH0YL09 131 aa13.71□□□□□ -0.21
APH1B-202ENST00000380340 MYL6BP14649 208 aa13.71□□□□□ -0.21
APH1B-202ENST00000380340 PRKAR2BP31323 418 aa13.71□□□□□ -0.21
APH1B-202ENST00000380340 EIF4G2P78344 907 aaKnown RBP eCLIP13.71□□□□□ -0.21
APH1B-202ENST00000380340 ANGEL2Q5VTE6 544 aaKnown RBP13.71□□□□□ -0.21
APH1B-202ENST00000380340 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
APH1B-202ENST00000380340 NUP98P52948 1817 aa13.71□□□□□ -0.22
APH1B-202ENST00000380340 CENPFP49454 3210 aa13.71□□□□□ -0.22
APH1B-202ENST00000380340 ALDH1A1P00352 501 aa13.7□□□□□ -0.22
APH1B-202ENST00000380340 EN2P19622 333 aaPredicted RBP13.7□□□□□ -0.22
APH1B-202ENST00000380340 SCARF1Q14162 830 aa13.7□□□□□ -0.22
APH1B-202ENST00000380340 KCNQ5Q9NR82 932 aa13.7□□□□□ -0.22
APH1B-202ENST00000380340 TRIM17Q9Y577 477 aa13.7□□□□□ -0.22
APH1B-202ENST00000380340 PAPPA2Q9BXP8 1791 aa13.69□□□□□ -0.22
APH1B-202ENST00000380340 RIMBP2O15034 1052 aa13.69□□□□□ -0.22
APH1B-202ENST00000380340 HTATSF1O43719 755 aaKnown RBP13.69□□□□□ -0.22
APH1B-202ENST00000380340 ECE2O60344 883 aa13.69□□□□□ -0.22
APH1B-202ENST00000380340 VIL1P09327 827 aaKnown RBP13.69□□□□□ -0.22
APH1B-202ENST00000380340 ZNF280AP59817 542 aaPredicted RBP13.69□□□□□ -0.22
APH1B-202ENST00000380340 MOB2Q70IA6 237 aa13.69□□□□□ -0.22
APH1B-202ENST00000380340 OTOP1Q7RTM1 612 aa13.69□□□□□ -0.22
APH1B-202ENST00000380340 NECTIN2Q92692 538 aa13.69□□□□□ -0.22
APH1B-202ENST00000380340 R3HDMLQ9H3Y0 253 aa13.69□□□□□ -0.22
APH1B-202ENST00000380340 NSFL1CQ9UNZ2 370 aaKnown RBP13.69□□□□□ -0.22
APH1B-202ENST00000380340 RTL9Q8NET4 1388 aa13.69□□□□□ -0.22
APH1B-202ENST00000380340 TRIOBPQ9H2D6 2365 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms