RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 PRPF40BQ6NWY9 871 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 LMBR1LQ6UX01 489 aa9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 RUFY2Q8WXA3 655 aa9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 INTS4Q96HW7 963 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 KAT6BQ8WYB5 2073 aa9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 NHSL1Q5SYE7 1610 aa9.6□□□□□ -0.87
PDLIM5-204ENST00000380176 PRPF40AO75400 957 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-204ENST00000380176 BRD1O95696 1058 aa9.6□□□□□ -0.87
PDLIM5-204ENST00000380176 RUFY3Q7L099 469 aa9.6□□□□□ -0.87
PDLIM5-204ENST00000380176 BCL11BQ9C0K0 894 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-204ENST00000380176 GRPEL1Q9HAV7 217 aa9.6□□□□□ -0.87
PDLIM5-204ENST00000380176 CCDC171Q6TFL3 1326 aa9.6□□□□□ -0.87
PDLIM5-204ENST00000380176 CHGBP05060 677 aa9.6□□□□□ -0.87
PDLIM5-204ENST00000380176 CASTP20810 708 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-204ENST00000380176 TNNI3KQ59H18 835 aa9.6□□□□□ -0.87
PDLIM5-204ENST00000380176 FPGT-TNNI3KV9GXZ4 949 aa9.6□□□□□ -0.87
PDLIM5-204ENST00000380176 H7C1W4 665 aa9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 LARGE1O95461 756 aa9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 MRE11P49959 708 aa9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 NECTIN1Q15223 517 aa9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 FSD1Q9BTV5 496 aa9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 COL15A1P39059 1388 aa9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 NCLP19338 710 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 GPT2Q8TD30 523 aa9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 DBNDD2Q9BQY9 259 aa9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 CHMP3Q9Y3E7 222 aa9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 RBM8AQ9Y5S9 174 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 ERBB4Q15303 1308 aa9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 ZNF589Q86UQ0 364 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 JAKMIP1Q96N16 626 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 NSFL1CQ9UNZ2 370 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 TAF6LQ9Y6J9 622 aa9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 TNS2Q63HR2 1409 aa9.59□□□□□ -0.87
PDLIM5-204ENST00000380176 FOXD4L6Q3SYB3 417 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-204ENST00000380176 CAVIN1Q6NZI2 390 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-204ENST00000380176 FOXD4L3Q6VB84 417 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-204ENST00000380176 MAP4K1Q92918 833 aa9.58□□□□□ -0.88
PDLIM5-204ENST00000380176 KCNB2Q92953 911 aa9.58□□□□□ -0.88
PDLIM5-204ENST00000380176 CWC25Q9NXE8 425 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-204ENST00000380176 BTG4Q9NY30 223 aa9.58□□□□□ -0.88
PDLIM5-204ENST00000380176 ASAP1Q9ULH1 1129 aa9.58□□□□□ -0.88
PDLIM5-204ENST00000380176 ATG9AQ7Z3C6 839 aa9.58□□□□□ -0.88
PDLIM5-204ENST00000380176 ZNF594Q96JF6 807 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-204ENST00000380176 ZNF330Q9Y3S2 320 aaPredicted RBP9.58□□□□□ -0.88
PDLIM5-204ENST00000380176 ITGB4P16144 1822 aa9.58□□□□□ -0.88
PDLIM5-204ENST00000380176 ATP5JP18859 108 aa9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 BRD2P25440 801 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 CREB3L3Q68CJ9 461 aa9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 ZSWIM6Q9HCJ5 1215 aa9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 SNRKQ9NRH2 765 aa9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 RBM27Q9P2N5 1060 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 LIMCH1Q9UPQ0 1083 aa9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 RPAP1Q9BWH6 1393 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 PIGBQ92521 554 aa9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 TMOD3Q9NYL9 352 aa9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 MED23Q9ULK4 1368 aa9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 HIP1O00291 1037 aa9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 SLC27A2O14975 620 aa9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 KCNJ4P48050 445 aa9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 LRRC24Q50LG9 513 aa9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 DNAJC2Q99543 621 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 PDRG1Q9NUG6 133 aa9.57□□□□□ -0.88
PDLIM5-204ENST00000380176 TIMM10P62072 90 aa9.56□□□□□ -0.88
PDLIM5-204ENST00000380176 DNAJC10Q8IXB1 793 aa9.56□□□□□ -0.88
PDLIM5-204ENST00000380176 SEC62Q99442 399 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-204ENST00000380176 ST3GAL1Q11201 340 aa9.56□□□□□ -0.88
PDLIM5-204ENST00000380176 ZSCAN23Q3MJ62 389 aa9.56□□□□□ -0.88
PDLIM5-204ENST00000380176 SLFNL1Q499Z3 407 aa9.56□□□□□ -0.88
PDLIM5-204ENST00000380176 VPS53Q5VIR6 699 aa9.56□□□□□ -0.88
PDLIM5-204ENST00000380176 CCDC191Q8NCU4 936 aa9.56□□□□□ -0.88
PDLIM5-204ENST00000380176 TCEANC2Q96MN5 208 aa9.56□□□□□ -0.88
PDLIM5-204ENST00000380176 GDPD2Q9HCC8 539 aa9.56□□□□□ -0.88
PDLIM5-204ENST00000380176 CYP46A1Q9Y6A2 500 aa9.56□□□□□ -0.88
PDLIM5-204ENST00000380176 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-204ENST00000380176 CCDC129Q6ZRS4 1044 aa9.55□□□□□ -0.88
PDLIM5-204ENST00000380176 DDX46Q7L014 1031 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-204ENST00000380176 CCDC83Q8IWF9 413 aa9.55□□□□□ -0.88
PDLIM5-204ENST00000380176 NEUROD6Q96NK8 337 aa9.55□□□□□ -0.88
PDLIM5-204ENST00000380176 PUS3Q9BZE2 481 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-204ENST00000380176 TM6SF1Q9BZW5 370 aa9.55□□□□□ -0.88
PDLIM5-204ENST00000380176 ATG3Q9NT62 314 aa9.55□□□□□ -0.88
PDLIM5-204ENST00000380176 ISY1Q9ULR0 285 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-204ENST00000380176 ZNF609O15014 1411 aa9.55□□□□□ -0.88
PDLIM5-204ENST00000380176 TAF5LO75529 589 aa9.55□□□□□ -0.88
PDLIM5-204ENST00000380176 ZKSCAN1P17029 563 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-204ENST00000380176 ME3Q16798 604 aa9.55□□□□□ -0.88
PDLIM5-204ENST00000380176 TMEM63CQ9P1W3 806 aa9.55□□□□□ -0.88
PDLIM5-204ENST00000380176 KCTD17Q8N5Z5 321 aa9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 NECAB1Q8N987 351 aa9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 HAUS7Q99871 368 aa9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 ISCA1Q9BUE6 129 aa9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 JCADQ9P266 1359 aa9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 SYT1P21579 422 aa9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 MKRN3Q13064 507 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 SYNE4Q8N205 404 aa9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 CCDC85AQ96PX6 553 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 TPCN1Q9ULQ1 816 aa9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 GADD45BO75293 160 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 ZNF445P59923 1031 aa9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 TCIRG1Q13488 830 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 227.5 ms