RNA–Protein interactions for RNA: ENST00000379726.7

SH3KBP1-204, Transcript of SH3 domain containing kinase binding protein 1, human

TSL 5

Gene SH3KBP1, Length 1,941 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3KBP1-204	ENST00000379726	TNNT3	P45378	269 aa	Predicted RBP	13.81	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	CNPY4	Q8N129	248 aa		13.81	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	SLC16A10	Q8TF71	515 aa		13.81	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	KIF2C	Q99661	725 aa		13.81	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.81	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	PCDHB15	Q9Y5E8	787 aa		13.81	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	CRKL	P46109	303 aa	Known RBP	13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	TAF7	Q15545	349 aa	Predicted RBP	13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	ICE2	Q659A1	982 aa		13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	KIAA1524	Q8TCG1	905 aa		13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	RASSF4	Q9H2L5	321 aa		13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	TSPY26P	Q9H489	355 aa		13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	SMC4	Q9NTJ3	1288 aa		13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	HEG1	Q9ULI3	1381 aa		13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	CYP19A1	P11511	503 aa	Predicted RBP	13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	GTF2A1	P52655	376 aa	Predicted RBP	13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	LMOD3	Q0VAK6	560 aa		13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	MCTP1	Q6DN14	999 aa		13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	INTS5	Q6P9B9	1019 aa	Known RBP	13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	FLAD1	Q8NFF5	587 aa		13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	MIS18A	Q9NYP9	233 aa		13.8	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	C4A	P0C0L4	1744 aa		13.79	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	SMTNL1	A8MU46	457 aa		13.79	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	DHX16	O60231	1041 aa	Known RBP	13.79	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	MYCN	P04198	464 aa	Predicted RBP	13.79	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	GUCY2C	P25092	1073 aa		13.79	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	NEUROD2	Q15784	382 aa		13.79	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	SLFNL1	Q499Z3	407 aa		13.79	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	GPT2	Q8TD30	523 aa		13.79	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	TRIM35	Q9UPQ4	493 aa		13.79	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	COG6	Q9Y2V7	657 aa		13.79	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	RPS6KA4	O75676	772 aa		13.78	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	YY1	P25490	414 aa		13.78	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	HDAC1	Q13547	482 aa	Predicted RBP	13.78	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	SYAP1	Q96A49	352 aa	Predicted RBP	13.78	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	FMNL2	Q96PY5	1086 aa		13.78	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	APAF1	O14727	1248 aa		13.78	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	RAD51AP2	Q09MP3	1159 aa		13.78	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.78	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	WWC1	Q8IX03	1113 aa		13.78	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	ZNF397	Q8NF99	534 aa	Predicted RBP	13.78	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	RTCB	Q9Y3I0	505 aa	Known RBP	13.78	□□□□□ -0.2
SH3KBP1-204	ENST00000379726	HNRNPH2	P55795	449 aa	Known RBP	13.77	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	KIF1BP	Q96EK5	621 aa		13.77	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	CCDC87	Q9NVE4	849 aa		13.77	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	TMEM63C	Q9P1W3	806 aa		13.77	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	CEP83	Q9Y592	693 aa		13.77	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	ARHGEF1	Q92888	912 aa	Known RBP	13.76	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.76	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	RSPH14	Q9UHP6	348 aa		13.76	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	PAXBP1	Q9Y5B6	917 aa		13.76	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	LOC102724159	A0A0B4J2E5	919 aa		13.76	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	PRAMEF22	A3QJZ6	481 aa		13.76	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	GOLGA6L6	A8MZA4	724 aa		13.76	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	ADRA2B	P18089	450 aa		13.76	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	PWP2	Q15269	919 aa	Known RBP	13.76	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	TRAPPC3L	Q5T215	181 aa		13.76	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	MSL1	Q68DK7	614 aa		13.76	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	MCC	P23508	829 aa		13.75	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	PANK1	Q8TE04	598 aa		13.75	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	SYT17	Q9BSW7	474 aa		13.75	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	ZBTB1	Q9Y2K1	713 aa		13.75	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	SOS1	Q07889	1333 aa	Predicted RBP	13.75	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	SYCE3	A1L190	88 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	KIF1C	O43896	1103 aa	Known RBP	13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	STARD3NL	O95772	234 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	CCDC172	P0C7W6	258 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	POLD1	P28340	1107 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	CASQ1	P31415	396 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	USP16	Q9Y5T5	823 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	LAMB4	A4D0S4	1761 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	FAM177B	A6PVY3	158 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	SNRPA1	P09661	255 aa	Known RBP	13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	EIF4A1	P60842	406 aa	Known RBP	13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	NBPF20	Q3BBV1	942 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	RNF20	Q5VTR2	975 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	TXLNB	Q8N3L3	684 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	BANK1	Q8NDB2	785 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	CFAP44	Q96MT7	982 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	USP25	Q9UHP3	1055 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	CHD4	Q14839	1912 aa		13.74	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	SATB1	Q01826	763 aa		13.73	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	A1BG	P04217	495 aa		13.72	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	RFC4	P35249	363 aa		13.72	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	BABAM1	Q9NWV8	329 aa		13.72	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	PRPF40A	O75400	957 aa	Known RBP	13.72	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	RABEP1	Q15276	862 aa		13.72	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	BMP2KL	Q5H9B9	411 aa		13.72	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	SRP68	Q9UHB9	627 aa	Known RBP	13.72	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	TSPYL4	Q9UJ04	414 aa		13.72	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	COL15A1	P39059	1388 aa		13.71	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	CHL1	O00533	1208 aa		13.71	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	GIGYF1	O75420	1035 aa	Predicted RBP	13.71	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	GYS1	P13807	737 aa		13.71	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	EIF5	P55010	431 aa	Known RBP	13.71	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	MNS1	Q8NEH6	495 aa		13.71	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	NOL10	Q9BSC4	688 aa	Known RBP	13.71	□□□□□ -0.21
SH3KBP1-204	ENST00000379726	DONSON	Q9NYP3	566 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms