RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TAF1P21675 1872 aa23.36■■□□□ 1.33
PDLIM4-202ENST00000379018 RIPK4P57078 832 aa23.36■■□□□ 1.33
PDLIM4-202ENST00000379018 LRP10Q7Z4F1 713 aa23.36■■□□□ 1.33
PDLIM4-202ENST00000379018 XAGE3Q8WTP9 111 aa23.36■■□□□ 1.33
PDLIM4-202ENST00000379018 SLC10A5Q5PT55 438 aa23.35■■□□□ 1.33
PDLIM4-202ENST00000379018 DDX46Q7L014 1031 aaKnown RBP23.35■■□□□ 1.33
PDLIM4-202ENST00000379018 COPS6Q7L5N1 327 aa23.35■■□□□ 1.33
PDLIM4-202ENST00000379018 CFAP44Q96MT7 982 aa23.35■■□□□ 1.33
PDLIM4-202ENST00000379018 TRMT112Q9UI30 125 aaKnown RBP23.35■■□□□ 1.33
PDLIM4-202ENST00000379018 SHTN1A0MZ66 631 aa23.34■■□□□ 1.33
PDLIM4-202ENST00000379018 SAPCD2Q86UD0 394 aa23.34■■□□□ 1.33
PDLIM4-202ENST00000379018 NLRP10Q86W26 655 aa23.34■■□□□ 1.33
PDLIM4-202ENST00000379018 SP8Q8IXZ3 490 aa23.34■■□□□ 1.33
PDLIM4-202ENST00000379018 TRPM4Q8TD43 1214 aa23.34■■□□□ 1.33
PDLIM4-202ENST00000379018 RTFDC1Q9BY42 306 aaPredicted RBP23.34■■□□□ 1.33
PDLIM4-202ENST00000379018 VPS33BQ9H267 617 aa23.34■■□□□ 1.33
PDLIM4-202ENST00000379018 BBOX1O75936 387 aa23.33■■□□□ 1.33
PDLIM4-202ENST00000379018 KIAA2012Q0VF49 1180 aa23.33■■□□□ 1.33
PDLIM4-202ENST00000379018 HSP90AB3PQ58FF7 597 aa23.33■■□□□ 1.33
PDLIM4-202ENST00000379018 GRAPQ13588 217 aa23.32■■□□□ 1.32
PDLIM4-202ENST00000379018 TNIP1Q15025 636 aa23.32■■□□□ 1.32
PDLIM4-202ENST00000379018 GRAPLQ8TC17 118 aaPredicted RBP23.32■■□□□ 1.32
PDLIM4-202ENST00000379018 CASP8AP2Q9UKL3 1982 aa23.32■■□□□ 1.32
PDLIM4-202ENST00000379018 MAP2K2P36507 400 aa23.31■■□□□ 1.32
PDLIM4-202ENST00000379018 HIRAP54198 1017 aaPredicted RBP23.31■■□□□ 1.32
PDLIM4-202ENST00000379018 SH3TC1Q8TE82 1336 aa23.31■■□□□ 1.32
PDLIM4-202ENST00000379018 YDJCA8MPS7 323 aa23.3■■□□□ 1.32
PDLIM4-202ENST00000379018 NEUROD2Q15784 382 aa23.3■■□□□ 1.32
PDLIM4-202ENST00000379018 KRT24Q2M2I5 525 aa23.3■■□□□ 1.32
PDLIM4-202ENST00000379018 CNOT7Q9UIV1 285 aaKnown RBP23.3■■□□□ 1.32
PDLIM4-202ENST00000379018 LAS1LQ9Y4W2 734 aaKnown RBP23.3■■□□□ 1.32
PDLIM4-202ENST00000379018 TCIRG1Q13488 830 aa23.29■■□□□ 1.32
PDLIM4-202ENST00000379018 DLK2Q6UY11 383 aa23.29■■□□□ 1.32
PDLIM4-202ENST00000379018 MICALL2Q8IY33 904 aa23.29■■□□□ 1.32
PDLIM4-202ENST00000379018 ZBTB12Q9Y330 459 aaPredicted RBP23.29■■□□□ 1.32
PDLIM4-202ENST00000379018 H7C1D1 291 aa23.28■■□□□ 1.32
PDLIM4-202ENST00000379018 CDC37L1Q7L3B6 337 aa23.28■■□□□ 1.32
PDLIM4-202ENST00000379018 USP48Q86UV5 1035 aa23.28■■□□□ 1.32
PDLIM4-202ENST00000379018 DBNDD1Q9H9R9 158 aa23.28■■□□□ 1.32
PDLIM4-202ENST00000379018 CDHR2Q9BYE9 1310 aa23.28■■□□□ 1.32
PDLIM4-202ENST00000379018 RIMBP2O15034 1052 aa23.27■■□□□ 1.32
PDLIM4-202ENST00000379018 MLLT1Q03111 559 aaPredicted RBP23.27■■□□□ 1.32
PDLIM4-202ENST00000379018 LMOD3Q0VAK6 560 aa23.27■■□□□ 1.32
PDLIM4-202ENST00000379018 CCDC146Q8IYE0 955 aa23.27■■□□□ 1.32
PDLIM4-202ENST00000379018 DUOX1Q9NRD9 1551 aa23.27■■□□□ 1.32
PDLIM4-202ENST00000379018 TMPOP42166 694 aaKnown RBP23.26■■□□□ 1.31
PDLIM4-202ENST00000379018 RTL5Q5HYW3 569 aaPredicted RBP23.26■■□□□ 1.31
PDLIM4-202ENST00000379018 SAMD7Q7Z3H4 446 aa23.26■■□□□ 1.31
PDLIM4-202ENST00000379018 ZC3H15Q8WU90 426 aaKnown RBP23.26■■□□□ 1.31
PDLIM4-202ENST00000379018 MCOLN1Q9GZU1 580 aa23.26■■□□□ 1.31
PDLIM4-202ENST00000379018 CHPF2Q9P2E5 772 aa23.26■■□□□ 1.31
PDLIM4-202ENST00000379018 PSMD14O00487 310 aa23.25■■□□□ 1.31
PDLIM4-202ENST00000379018 BRPF1P55201 1214 aaPredicted RBP23.25■■□□□ 1.31
PDLIM4-202ENST00000379018 HUNKP57058 714 aa23.25■■□□□ 1.31
PDLIM4-202ENST00000379018 TBC1D10BQ4KMP7 808 aaPredicted RBP23.25■■□□□ 1.31
PDLIM4-202ENST00000379018 RBM26Q5T8P6 1007 aaKnown RBP23.25■■□□□ 1.31
PDLIM4-202ENST00000379018 ZIC5Q96T25 663 aa23.25■■□□□ 1.31
PDLIM4-202ENST00000379018 PGAP2Q9UHJ9 254 aa23.25■■□□□ 1.31
PDLIM4-202ENST00000379018 NSFL1CQ9UNZ2 370 aaKnown RBP23.25■■□□□ 1.31
PDLIM4-202ENST00000379018 DDX60Q8IY21 1712 aaKnown RBP23.25■■□□□ 1.31
PDLIM4-202ENST00000379018 ATP5J2-PTCD1G3V325 749 aa23.24■■□□□ 1.31
PDLIM4-202ENST00000379018 C6orf229H3BNL8 230 aa23.24■■□□□ 1.31
PDLIM4-202ENST00000379018 CA12O43570 354 aa23.24■■□□□ 1.31
PDLIM4-202ENST00000379018 WASHC4Q2M389 1173 aa23.24■■□□□ 1.31
PDLIM4-202ENST00000379018 CELF1Q92879 486 aaKnown RBP23.24■■□□□ 1.31
PDLIM4-202ENST00000379018 FAM89AQ96GI7 184 aa23.24■■□□□ 1.31
PDLIM4-202ENST00000379018 LRRC37AA6NMS7 1700 aa23.23■■□□□ 1.31
PDLIM4-202ENST00000379018 DGKZQ13574 1117 aa23.23■■□□□ 1.31
PDLIM4-202ENST00000379018 HHIPL1Q96JK4 782 aa23.23■■□□□ 1.31
PDLIM4-202ENST00000379018 BABAM1Q9NWV8 329 aa23.23■■□□□ 1.31
PDLIM4-202ENST00000379018 POLR2AP24928 1970 aaKnown RBP23.22■■□□□ 1.31
PDLIM4-202ENST00000379018 DOK7Q18PE1 504 aa23.22■■□□□ 1.31
PDLIM4-202ENST00000379018 HDGFL1Q5TGJ6 251 aa23.22■■□□□ 1.31
PDLIM4-202ENST00000379018 KRT26Q7Z3Y9 468 aa23.22■■□□□ 1.31
PDLIM4-202ENST00000379018 TMC4Q7Z404 712 aa23.22■■□□□ 1.31
PDLIM4-202ENST00000379018 COL4A1P02462 1669 aa23.2■■□□□ 1.3
PDLIM4-202ENST00000379018 ADM5C9JUS6 153 aa23.2■■□□□ 1.3
PDLIM4-202ENST00000379018 ECE2O60344 883 aa23.2■■□□□ 1.3
PDLIM4-202ENST00000379018 EGFRP00533 1210 aa23.2■■□□□ 1.3
PDLIM4-202ENST00000379018 GPSM2P81274 684 aa23.2■■□□□ 1.3
PDLIM4-202ENST00000379018 NOGQ13253 232 aa23.2■■□□□ 1.3
PDLIM4-202ENST00000379018 PLBD2Q8NHP8 589 aa23.19■■□□□ 1.3
PDLIM4-202ENST00000379018 KCNQ5Q9NR82 932 aa23.19■■□□□ 1.3
PDLIM4-202ENST00000379018 POLLQ9UGP5 575 aa23.19■■□□□ 1.3
PDLIM4-202ENST00000379018 ANKRD13DQ6ZTN6 518 aa23.18■■□□□ 1.3
PDLIM4-202ENST00000379018 DCPSQ96C86 337 aaKnown RBP23.18■■□□□ 1.3
PDLIM4-202ENST00000379018 GBA2Q9HCG7 927 aaPredicted RBP23.18■■□□□ 1.3
PDLIM4-202ENST00000379018 DPF2Q92785 391 aa23.17■■□□□ 1.3
PDLIM4-202ENST00000379018 RTL9Q8NET4 1388 aa23.16■■□□□ 1.3
PDLIM4-202ENST00000379018 G3V3G9 751 aa23.16■■□□□ 1.3
PDLIM4-202ENST00000379018 CHL1O00533 1208 aa23.16■■□□□ 1.3
PDLIM4-202ENST00000379018 SLC34A2O95436 690 aa23.16■■□□□ 1.3
PDLIM4-202ENST00000379018 DCAF8Q5TAQ9 597 aa23.16■■□□□ 1.3
PDLIM4-202ENST00000379018 RGMBQ6NW40 437 aa23.16■■□□□ 1.3
PDLIM4-202ENST00000379018 C2orf69Q8N8R5 385 aa23.16■■□□□ 1.3
PDLIM4-202ENST00000379018 EYA3Q99504 573 aa23.16■■□□□ 1.3
PDLIM4-202ENST00000379018 ISCA1Q9BUE6 129 aa23.16■■□□□ 1.3
PDLIM4-202ENST00000379018 IRS4O14654 1257 aaPredicted RBP23.15■■□□□ 1.3
PDLIM4-202ENST00000379018 SF3B3Q15393 1217 aaKnown RBP23.15■■□□□ 1.3
PDLIM4-202ENST00000379018 KIF4BQ2VIQ3 1234 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms