RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 INTS3Q68E01 1043 aaKnown RBP17.46■□□□□ 0.39
UPK1A-202ENST00000379013 CLUAP1Q96AJ1 413 aa17.46■□□□□ 0.39
UPK1A-202ENST00000379013 UTP14AQ9BVJ6 771 aaKnown RBP17.46■□□□□ 0.39
UPK1A-202ENST00000379013 ZNF277Q9NRM2 450 aaPredicted RBP17.46■□□□□ 0.39
UPK1A-202ENST00000379013 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.39
UPK1A-202ENST00000379013 SNED1Q8TER0 1413 aa17.46■□□□□ 0.39
UPK1A-202ENST00000379013 PLIN1O60240 522 aa17.45■□□□□ 0.38
UPK1A-202ENST00000379013 ITPRIPQ8IWB1 547 aa17.45■□□□□ 0.38
UPK1A-202ENST00000379013 CCDC191Q8NCU4 936 aa17.45■□□□□ 0.38
UPK1A-202ENST00000379013 ISCA1Q9BUE6 129 aa17.45■□□□□ 0.38
UPK1A-202ENST00000379013 KDM2BQ8NHM5 1336 aa17.45■□□□□ 0.38
UPK1A-202ENST00000379013 F6X3S4 739 aa17.44■□□□□ 0.38
UPK1A-202ENST00000379013 ATP5J2-PTCD1G3V325 749 aa17.44■□□□□ 0.38
UPK1A-202ENST00000379013 DDNO94850 711 aaPredicted RBP17.44■□□□□ 0.38
UPK1A-202ENST00000379013 ALDH1B1P30837 517 aa17.44■□□□□ 0.38
UPK1A-202ENST00000379013 TRIM28Q13263 835 aaKnown RBP17.44■□□□□ 0.38
UPK1A-202ENST00000379013 MVPQ14764 893 aaKnown RBP17.44■□□□□ 0.38
UPK1A-202ENST00000379013 CCDC93Q567U6 631 aa17.44■□□□□ 0.38
UPK1A-202ENST00000379013 MYD88Q99836 296 aa17.44■□□□□ 0.38
UPK1A-202ENST00000379013 MYH3P11055 1940 aa17.43■□□□□ 0.38
UPK1A-202ENST00000379013 HTRA3P83110 453 aa17.43■□□□□ 0.38
UPK1A-202ENST00000379013 BEND3Q5T5X7 828 aa17.43■□□□□ 0.38
UPK1A-202ENST00000379013 PPP1R42Q7Z4L9 355 aa17.43■□□□□ 0.38
UPK1A-202ENST00000379013 CWC25Q9NXE8 425 aaPredicted RBP17.43■□□□□ 0.38
UPK1A-202ENST00000379013 CACNA1SQ13698 1873 aa17.43■□□□□ 0.38
UPK1A-202ENST00000379013 ZC3H4Q9UPT8 1303 aaKnown RBP17.43■□□□□ 0.38
UPK1A-202ENST00000379013 GNAI3P08754 354 aa17.42■□□□□ 0.38
UPK1A-202ENST00000379013 FKBP4Q02790 459 aaKnown RBP eCLIP17.42■□□□□ 0.38
UPK1A-202ENST00000379013 RBM46Q8TBY0 533 aaKnown RBP17.42■□□□□ 0.38
UPK1A-202ENST00000379013 CRAMP1Q96RY5 1269 aa17.42■□□□□ 0.38
UPK1A-202ENST00000379013 LAMB2P55268 1798 aa17.42■□□□□ 0.38
UPK1A-202ENST00000379013 NEURL1BA8MQ27 555 aa17.41■□□□□ 0.38
UPK1A-202ENST00000379013 SOGA3Q5TF21 947 aa17.41■□□□□ 0.38
UPK1A-202ENST00000379013 TMEM57Q8N5G2 664 aa17.41■□□□□ 0.38
UPK1A-202ENST00000379013 DNAJC5GQ8N7S2 189 aa17.41■□□□□ 0.38
UPK1A-202ENST00000379013 PANK1Q8TE04 598 aa17.41■□□□□ 0.38
UPK1A-202ENST00000379013 C9orf78Q9NZ63 289 aaPredicted RBP17.41■□□□□ 0.38
UPK1A-202ENST00000379013 TRMT112Q9UI30 125 aaKnown RBP17.41■□□□□ 0.38
UPK1A-202ENST00000379013 RIC1Q4ADV7 1423 aa17.4■□□□□ 0.38
UPK1A-202ENST00000379013 POTEIP0CG38 1075 aa17.4■□□□□ 0.38
UPK1A-202ENST00000379013 POTEJP0CG39 1038 aa17.4■□□□□ 0.38
UPK1A-202ENST00000379013 VEGFAP15692 232 aaPredicted RBP17.4■□□□□ 0.38
UPK1A-202ENST00000379013 RPGRQ92834 1020 aaKnown RBP17.4■□□□□ 0.38
UPK1A-202ENST00000379013 FAM89AQ96GI7 184 aa17.4■□□□□ 0.38
UPK1A-202ENST00000379013 NLRP3Q96P20 1036 aa17.4■□□□□ 0.38
UPK1A-202ENST00000379013 COL4A5P29400 1685 aa17.39■□□□□ 0.37
UPK1A-202ENST00000379013 GCKRQ14397 625 aa17.39■□□□□ 0.37
UPK1A-202ENST00000379013 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
UPK1A-202ENST00000379013 ERICH6BQ5W0A0 696 aa17.39■□□□□ 0.37
UPK1A-202ENST00000379013 RTKN2Q8IZC4 609 aa17.39■□□□□ 0.37
UPK1A-202ENST00000379013 JARID2Q92833 1246 aaPredicted RBP17.39■□□□□ 0.37
UPK1A-202ENST00000379013 RBM17Q96I25 401 aaKnown RBP17.39■□□□□ 0.37
UPK1A-202ENST00000379013 COG6Q9Y2V7 657 aa17.39■□□□□ 0.37
UPK1A-202ENST00000379013 ZNF541Q9H0D2 1346 aa17.39■□□□□ 0.37
UPK1A-202ENST00000379013 GRM8O00222 908 aa17.38■□□□□ 0.37
UPK1A-202ENST00000379013 RLBP1P12271 317 aa17.38■□□□□ 0.37
UPK1A-202ENST00000379013 DICER1Q9UPY3 1922 aaKnown RBP17.37■□□□□ 0.37
UPK1A-202ENST00000379013 IGKV5-2P06315 115 aa17.37■□□□□ 0.37
UPK1A-202ENST00000379013 UBTFL1P0CB47 393 aaPredicted RBP17.37■□□□□ 0.37
UPK1A-202ENST00000379013 IARSP41252 1262 aaKnown RBP17.37■□□□□ 0.37
UPK1A-202ENST00000379013 CWF19L2Q2TBE0 894 aaKnown RBP17.37■□□□□ 0.37
UPK1A-202ENST00000379013 DPY19L2Q6NUT2 758 aa17.37■□□□□ 0.37
UPK1A-202ENST00000379013 PSMD1Q99460 953 aa17.37■□□□□ 0.37
UPK1A-202ENST00000379013 SH3TC1Q8TE82 1336 aa17.37■□□□□ 0.37
UPK1A-202ENST00000379013 FZD9O00144 591 aa17.36■□□□□ 0.37
UPK1A-202ENST00000379013 PPEF1O14829 653 aaPredicted RBP17.36■□□□□ 0.37
UPK1A-202ENST00000379013 PCCAP05165 728 aaPredicted RBP17.36■□□□□ 0.37
UPK1A-202ENST00000379013 C16orf71Q8IYS4 520 aaPredicted RBP17.36■□□□□ 0.37
UPK1A-202ENST00000379013 ZBTB38Q8NAP3 1195 aaPredicted RBP17.36■□□□□ 0.37
UPK1A-202ENST00000379013 ATP6V0A2Q9Y487 856 aa17.36■□□□□ 0.37
UPK1A-202ENST00000379013 COL4A1P02462 1669 aa17.36■□□□□ 0.37
UPK1A-202ENST00000379013 FSTL1Q12841 308 aa17.35■□□□□ 0.37
UPK1A-202ENST00000379013 C20orf194Q5TEA3 1177 aa17.35■□□□□ 0.37
UPK1A-202ENST00000379013 UTYO14607 1347 aa17.35■□□□□ 0.37
UPK1A-202ENST00000379013 CDHR2Q9BYE9 1310 aa17.35■□□□□ 0.37
UPK1A-202ENST00000379013 TIAM2Q8IVF5 1701 aa17.35■□□□□ 0.37
UPK1A-202ENST00000379013 GNAI2P04899 355 aa17.34■□□□□ 0.37
UPK1A-202ENST00000379013 TAF1P21675 1872 aa17.34■□□□□ 0.37
UPK1A-202ENST00000379013 CC2D2BQ6DHV5 1058 aa17.34■□□□□ 0.37
UPK1A-202ENST00000379013 TNNQ9UQP3 1299 aa17.34■□□□□ 0.37
UPK1A-202ENST00000379013 DDX60Q8IY21 1712 aaKnown RBP17.33■□□□□ 0.37
UPK1A-202ENST00000379013 ZBTB7BO15156 539 aaPredicted RBP17.33■□□□□ 0.36
UPK1A-202ENST00000379013 APLP1P51693 650 aa17.33■□□□□ 0.36
UPK1A-202ENST00000379013 SF3B3Q15393 1217 aaKnown RBP17.33■□□□□ 0.36
UPK1A-202ENST00000379013 UBE3BQ7Z3V4 1068 aa17.33■□□□□ 0.36
UPK1A-202ENST00000379013 CELF1Q92879 486 aaKnown RBP17.33■□□□□ 0.36
UPK1A-202ENST00000379013 CRBNQ96SW2 442 aa17.33■□□□□ 0.36
UPK1A-202ENST00000379013 WDR90Q96KV7 1748 aa17.33■□□□□ 0.36
UPK1A-202ENST00000379013 BBOX1O75936 387 aa17.32■□□□□ 0.36
UPK1A-202ENST00000379013 SP8Q8IXZ3 490 aa17.32■□□□□ 0.36
UPK1A-202ENST00000379013 SMC1BQ8NDV3 1235 aa17.32■□□□□ 0.36
UPK1A-202ENST00000379013 L3MBTL3Q96JM7 780 aaPredicted RBP17.32■□□□□ 0.36
UPK1A-202ENST00000379013 USP44Q9H0E7 712 aa17.32■□□□□ 0.36
UPK1A-202ENST00000379013 H7C1W4 665 aa17.31■□□□□ 0.36
UPK1A-202ENST00000379013 IRS4O14654 1257 aaPredicted RBP17.31■□□□□ 0.36
UPK1A-202ENST00000379013 GRAPQ13588 217 aa17.31■□□□□ 0.36
UPK1A-202ENST00000379013 GRAPLQ8TC17 118 aaPredicted RBP17.31■□□□□ 0.36
UPK1A-202ENST00000379013 MEIS3Q99687 375 aa17.31■□□□□ 0.36
UPK1A-202ENST00000379013 RTFDC1Q9BY42 306 aaPredicted RBP17.31■□□□□ 0.36
UPK1A-202ENST00000379013 TAF1DQ9H5J8 278 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms