RNA–Protein interactions for RNA: ENST00000378961.8

CHGB-201, Transcript of chromogranin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGB, Length 2,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGB-201ENST00000378961 RAD50Q92878 1312 aa15.04■□□□□ -0
CHGB-201ENST00000378961 MED1Q15648 1581 aaPredicted RBP15.04■□□□□ -0
CHGB-201ENST00000378961 TPM3P06753 285 aa15.04■□□□□ -0
CHGB-201ENST00000378961 TATP17735 454 aaPredicted RBP15.04■□□□□ -0
CHGB-201ENST00000378961 ERCC4Q92889 916 aaPredicted RBP15.04■□□□□ -0
CHGB-201ENST00000378961 JAKMIP1Q96N16 626 aaKnown RBP15.04■□□□□ -0
CHGB-201ENST00000378961 TRIM34Q9BYJ4 488 aa15.04■□□□□ -0
CHGB-201ENST00000378961 USP16Q9Y5T5 823 aa15.04■□□□□ -0
CHGB-201ENST00000378961 NCAPD2Q15021 1401 aa15.04■□□□□ -0
CHGB-201ENST00000378961 PXDNQ92626 1479 aa15.04■□□□□ -0
CHGB-201ENST00000378961 ALS2Q96Q42 1657 aa15.03■□□□□ -0
CHGB-201ENST00000378961 PTH1RQ03431 593 aa15.03■□□□□ -0
CHGB-201ENST00000378961 ME3Q16798 604 aa15.03■□□□□ -0
CHGB-201ENST00000378961 PRPF40BQ6NWY9 871 aaKnown RBP15.03■□□□□ -0
CHGB-201ENST00000378961 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.03■□□□□ -0
CHGB-201ENST00000378961 FAM208AQ9UK61 1670 aaKnown RBP15.03■□□□□ -0
CHGB-201ENST00000378961 LMO7Q8WWI1 1683 aa15.02■□□□□ -0
CHGB-201ENST00000378961 TNS3Q68CZ2 1445 aa15.02■□□□□ -0
CHGB-201ENST00000378961 NR1I2O75469 434 aa15.02■□□□□ -0
CHGB-201ENST00000378961 CEBPZQ03701 1054 aaKnown RBP15.02■□□□□ -0
CHGB-201ENST00000378961 ZNF397Q8NF99 534 aaPredicted RBP15.02■□□□□ -0
CHGB-201ENST00000378961 LSG1Q9H089 658 aaKnown RBP15.02■□□□□ -0
CHGB-201ENST00000378961 HYPKQ9NX55 129 aa15.02■□□□□ -0
CHGB-201ENST00000378961 SPATA31A3Q5VYP0 1347 aa15.02□□□□□ -0.01
CHGB-201ENST00000378961 UBTFL1P0CB47 393 aaPredicted RBP15.02□□□□□ -0.01
CHGB-201ENST00000378961 ZNF165P49910 485 aa15.02□□□□□ -0.01
CHGB-201ENST00000378961 FOSBP53539 338 aa15.02□□□□□ -0.01
CHGB-201ENST00000378961 AEBP2Q6ZN18 517 aaPredicted RBP15.02□□□□□ -0.01
CHGB-201ENST00000378961 PLA2G4DQ86XP0 818 aa15.02□□□□□ -0.01
CHGB-201ENST00000378961 RGPD5Q99666 1765 aa15.02□□□□□ -0.01
CHGB-201ENST00000378961 ANXA1P04083 346 aa15.01□□□□□ -0.01
CHGB-201ENST00000378961 STK3Q13188 491 aa15.01□□□□□ -0.01
CHGB-201ENST00000378961 ERCC6LQ2NKX8 1250 aa15.01□□□□□ -0.01
CHGB-201ENST00000378961 POLR3GO15318 223 aaPredicted RBP15.01□□□□□ -0.01
CHGB-201ENST00000378961 HNRNPH2P55795 449 aaKnown RBP15.01□□□□□ -0.01
CHGB-201ENST00000378961 GORABQ5T7V8 394 aa15.01□□□□□ -0.01
CHGB-201ENST00000378961 NEK11Q8NG66 645 aa15.01□□□□□ -0.01
CHGB-201ENST00000378961 SGSM2O43147 1006 aa15□□□□□ -0.01
CHGB-201ENST00000378961 ATP8B2P98198 1209 aa15□□□□□ -0.01
CHGB-201ENST00000378961 LARP1BQ659C4 914 aaKnown RBP15□□□□□ -0.01
CHGB-201ENST00000378961 BRINP3Q76B58 766 aa15□□□□□ -0.01
CHGB-201ENST00000378961 DDX11Q96FC9 970 aa15□□□□□ -0.01
CHGB-201ENST00000378961 USP44Q9H0E7 712 aa15□□□□□ -0.01
CHGB-201ENST00000378961 PDRG1Q9NUG6 133 aa15□□□□□ -0.01
CHGB-201ENST00000378961 DBF4Q9UBU7 674 aaPredicted RBP15□□□□□ -0.01
CHGB-201ENST00000378961 PAXBP1Q9Y5B6 917 aa15□□□□□ -0.01
CHGB-201ENST00000378961 CACNA1FO60840 1977 aa15□□□□□ -0.01
CHGB-201ENST00000378961 CCDC66A2RUB6 948 aa15□□□□□ -0.01
CHGB-201ENST00000378961 PI4KAP2A4QPH2 592 aa15□□□□□ -0.01
CHGB-201ENST00000378961 PPFIA3O75145 1194 aa15□□□□□ -0.01
CHGB-201ENST00000378961 SKILP12757 684 aa15□□□□□ -0.01
CHGB-201ENST00000378961 PTPN14Q15678 1187 aa15□□□□□ -0.01
CHGB-201ENST00000378961 C11orf57Q6ZUT1 292 aaPredicted RBP15□□□□□ -0.01
CHGB-201ENST00000378961 PI4KAP1Q8N8J0 262 aa15□□□□□ -0.01
CHGB-201ENST00000378961 ATP6V1DQ9Y5K8 247 aa15□□□□□ -0.01
CHGB-201ENST00000378961 GOLGA6L4A6NEF3 574 aa14.99□□□□□ -0.01
CHGB-201ENST00000378961 GIGYF1O75420 1035 aaPredicted RBP14.99□□□□□ -0.01
CHGB-201ENST00000378961 DNAAF4Q8WXU2 420 aa14.99□□□□□ -0.01
CHGB-201ENST00000378961 SURF6O75683 361 aaKnown RBP14.99□□□□□ -0.01
CHGB-201ENST00000378961 LRRC8AQ8IWT6 810 aa14.99□□□□□ -0.01
CHGB-201ENST00000378961 BICD2Q8TD16 824 aa14.99□□□□□ -0.01
CHGB-201ENST00000378961 TPCN1Q9ULQ1 816 aa14.99□□□□□ -0.01
CHGB-201ENST00000378961 TAF6LQ9Y6J9 622 aa14.99□□□□□ -0.01
CHGB-201ENST00000378961 OVOS2A0A0G2JMS6 1433 aa14.99□□□□□ -0.01
CHGB-201ENST00000378961 KDM4FA0A1W2PPD8 638 aa14.98□□□□□ -0.01
CHGB-201ENST00000378961 PDIA4P13667 645 aaKnown RBP14.98□□□□□ -0.01
CHGB-201ENST00000378961 SLAIN2Q9P270 581 aa14.98□□□□□ -0.01
CHGB-201ENST00000378961 KDM3BQ7LBC6 1761 aa14.98□□□□□ -0.01
CHGB-201ENST00000378961 SYCP1Q15431 976 aa14.98□□□□□ -0.01
CHGB-201ENST00000378961 IFNL2Q8IZJ0 200 aa14.98□□□□□ -0.01
CHGB-201ENST00000378961 NOL10Q9BSC4 688 aaKnown RBP14.98□□□□□ -0.01
CHGB-201ENST00000378961 EPC1Q9H2F5 836 aa14.98□□□□□ -0.01
CHGB-201ENST00000378961 TMX1Q9H3N1 280 aa14.98□□□□□ -0.01
CHGB-201ENST00000378961 PXDNLA1KZ92 1463 aa14.98□□□□□ -0.01
CHGB-201ENST00000378961 PHKG2P15735 406 aa14.97□□□□□ -0.01
CHGB-201ENST00000378961 KRT85P78386 507 aa14.97□□□□□ -0.01
CHGB-201ENST00000378961 PI4K2BQ8TCG2 481 aa14.97□□□□□ -0.01
CHGB-201ENST00000378961 SPATA32Q96LK8 384 aa14.97□□□□□ -0.01
CHGB-201ENST00000378961 CAMTA1Q9Y6Y1 1673 aa14.97□□□□□ -0.01
CHGB-201ENST00000378961 ZNF335Q9H4Z2 1342 aaPredicted RBP14.97□□□□□ -0.01
CHGB-201ENST00000378961 PRAMEF22A3QJZ6 481 aa14.97□□□□□ -0.01
CHGB-201ENST00000378961 CCDC69A6NI79 296 aa14.97□□□□□ -0.01
CHGB-201ENST00000378961 SLC39A6Q13433 755 aa14.97□□□□□ -0.01
CHGB-201ENST00000378961 NFATC2IPQ8NCF5 419 aa14.97□□□□□ -0.01
CHGB-201ENST00000378961 PGBD1Q96JS3 809 aa14.97□□□□□ -0.01
CHGB-201ENST00000378961 FTOQ9C0B1 505 aaKnown RBP eCLIP14.97□□□□□ -0.01
CHGB-201ENST00000378961 IFIT2P09913 472 aaKnown RBP14.96□□□□□ -0.01
CHGB-201ENST00000378961 LARP1Q6PKG0 1096 aaKnown RBP14.96□□□□□ -0.01
CHGB-201ENST00000378961 SLC52A2Q9HAB3 445 aa14.96□□□□□ -0.01
CHGB-201ENST00000378961 ZCCHC17Q9NP64 241 aaKnown RBP14.96□□□□□ -0.01
CHGB-201ENST00000378961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.96□□□□□ -0.01
CHGB-201ENST00000378961 STAP2Q9UGK3 403 aa14.96□□□□□ -0.01
CHGB-201ENST00000378961 BEND3Q5T5X7 828 aa14.96□□□□□ -0.01
CHGB-201ENST00000378961 PRDM11Q9NQV5 511 aa14.96□□□□□ -0.01
CHGB-201ENST00000378961 ZNF790Q6PG37 636 aa14.95□□□□□ -0.02
CHGB-201ENST00000378961 TDRD7Q8NHU6 1098 aaKnown RBP14.95□□□□□ -0.02
CHGB-201ENST00000378961 SEC31AO94979 1220 aaKnown RBP14.95□□□□□ -0.02
CHGB-201ENST00000378961 PROSER3Q2NL68 480 aa14.95□□□□□ -0.02
CHGB-201ENST00000378961 NYAP1Q6ZVC0 841 aa14.95□□□□□ -0.02
CHGB-201ENST00000378961 MAP3K2Q9Y2U5 619 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms