RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 TRMT1Q9NXH9 659 aaKnown RBP16.05■□□□□ 0.16
KIF3A-201ENST00000378735 TSPYL4Q9UJ04 414 aa16.05■□□□□ 0.16
KIF3A-201ENST00000378735 UBTFL1P0CB47 393 aaPredicted RBP16.05■□□□□ 0.16
KIF3A-201ENST00000378735 EIF4A2Q14240 407 aaKnown RBP16.05■□□□□ 0.16
KIF3A-201ENST00000378735 RRS1Q15050 365 aaKnown RBP16.05■□□□□ 0.16
KIF3A-201ENST00000378735 HSP90AB4PQ58FF6 505 aa16.05■□□□□ 0.16
KIF3A-201ENST00000378735 PRPF40BQ6NWY9 871 aaKnown RBP16.05■□□□□ 0.16
KIF3A-201ENST00000378735 CCDC150Q8NCX0 1101 aa16.05■□□□□ 0.16
KIF3A-201ENST00000378735 BECN2A8MW95 431 aa16.04■□□□□ 0.16
KIF3A-201ENST00000378735 PLCD3Q8N3E9 789 aa16.04■□□□□ 0.16
KIF3A-201ENST00000378735 NECAB1Q8N987 351 aa16.04■□□□□ 0.16
KIF3A-201ENST00000378735 ROBO2Q9HCK4 1378 aa16.04■□□□□ 0.16
KIF3A-201ENST00000378735 CCP110O43303 1012 aa16.04■□□□□ 0.16
KIF3A-201ENST00000378735 MAP4K4O95819 1239 aaPredicted RBP16.04■□□□□ 0.16
KIF3A-201ENST00000378735 USP44Q9H0E7 712 aa16.04■□□□□ 0.16
KIF3A-201ENST00000378735 CFAP45Q9UL16 551 aa16.04■□□□□ 0.16
KIF3A-201ENST00000378735 SETD1BQ9UPS6 1966 aaKnown RBP16.04■□□□□ 0.16
KIF3A-201ENST00000378735 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.04■□□□□ 0.16
KIF3A-201ENST00000378735 ARHGAP29Q52LW3 1261 aa16.04■□□□□ 0.16
KIF3A-201ENST00000378735 CTR9Q6PD62 1173 aa16.04■□□□□ 0.16
KIF3A-201ENST00000378735 ANO10Q9NW15 660 aa16.04■□□□□ 0.16
KIF3A-201ENST00000378735 USP16Q9Y5T5 823 aa16.04■□□□□ 0.16
KIF3A-201ENST00000378735 SURF6O75683 361 aaKnown RBP16.03■□□□□ 0.16
KIF3A-201ENST00000378735 PTH1RQ03431 593 aa16.03■□□□□ 0.16
KIF3A-201ENST00000378735 FAM173BQ6P4H8 233 aa16.03■□□□□ 0.16
KIF3A-201ENST00000378735 C11orf57Q6ZUT1 292 aaPredicted RBP16.03■□□□□ 0.16
KIF3A-201ENST00000378735 PPP1R13BQ96KQ4 1090 aa16.03■□□□□ 0.16
KIF3A-201ENST00000378735 RASSF4Q9H2L5 321 aa16.03■□□□□ 0.16
KIF3A-201ENST00000378735 ZSCAN16Q9H4T2 348 aaPredicted RBP16.03■□□□□ 0.16
KIF3A-201ENST00000378735 YY1AP1Q9H869 796 aa16.03■□□□□ 0.16
KIF3A-201ENST00000378735 CWC15Q9P013 229 aaKnown RBP16.03■□□□□ 0.16
KIF3A-201ENST00000378735 PHLPP2Q6ZVD8 1323 aa16.03■□□□□ 0.16
KIF3A-201ENST00000378735 NRDCO43847 1150 aa16.03■□□□□ 0.16
KIF3A-201ENST00000378735 IRX3P78415 501 aaPredicted RBP16.03■□□□□ 0.16
KIF3A-201ENST00000378735 E4F1Q66K89 784 aaPredicted RBP16.03■□□□□ 0.16
KIF3A-201ENST00000378735 TFIP11Q9UBB9 837 aaKnown RBP16.03■□□□□ 0.16
KIF3A-201ENST00000378735 ORC3Q9UBD5 711 aaPredicted RBP16.03■□□□□ 0.16
KIF3A-201ENST00000378735 PTPRUQ92729 1446 aa16.03■□□□□ 0.16
KIF3A-201ENST00000378735 DHX40Q8IX18 779 aaKnown RBP16.02■□□□□ 0.16
KIF3A-201ENST00000378735 NAT10Q9H0A0 1025 aaKnown RBP16.02■□□□□ 0.16
KIF3A-201ENST00000378735 ADCY9O60503 1353 aa16.02■□□□□ 0.15
KIF3A-201ENST00000378735 UBXN4Q92575 508 aa16.02■□□□□ 0.15
KIF3A-201ENST00000378735 SNRKQ9NRH2 765 aa16.02■□□□□ 0.15
KIF3A-201ENST00000378735 PSD3Q9NYI0 1048 aa16.02■□□□□ 0.15
KIF3A-201ENST00000378735 LARP1Q6PKG0 1096 aaKnown RBP16.01■□□□□ 0.15
KIF3A-201ENST00000378735 SENP3Q9H4L4 574 aaPredicted RBP16.01■□□□□ 0.15
KIF3A-201ENST00000378735 ZRANB1Q9UGI0 708 aa16.01■□□□□ 0.15
KIF3A-201ENST00000378735 RESTQ13127 1097 aa16.01■□□□□ 0.15
KIF3A-201ENST00000378735 CREB3L3Q68CJ9 461 aa16.01■□□□□ 0.15
KIF3A-201ENST00000378735 PPP1R42Q7Z4L9 355 aa16.01■□□□□ 0.15
KIF3A-201ENST00000378735 CEP57L1Q8IYX8 460 aa16.01■□□□□ 0.15
KIF3A-201ENST00000378735 MYH15Q9Y2K3 1946 aa16.01■□□□□ 0.15
KIF3A-201ENST00000378735 HIP1O00291 1037 aa16■□□□□ 0.15
KIF3A-201ENST00000378735 LRRC37A3O60309 1634 aa16■□□□□ 0.15
KIF3A-201ENST00000378735 CCDC158Q5M9N0 1113 aa16■□□□□ 0.15
KIF3A-201ENST00000378735 SYT10Q6XYQ8 523 aa16■□□□□ 0.15
KIF3A-201ENST00000378735 MAP4K1Q92918 833 aa16■□□□□ 0.15
KIF3A-201ENST00000378735 CCDC61Q9Y6R9 512 aa16■□□□□ 0.15
KIF3A-201ENST00000378735 EFCAB8A8MWE9 144 aa16■□□□□ 0.15
KIF3A-201ENST00000378735 ETF1P62495 437 aaKnown RBP15.99■□□□□ 0.15
KIF3A-201ENST00000378735 RBM8AQ9Y5S9 174 aaKnown RBP15.99■□□□□ 0.15
KIF3A-201ENST00000378735 NPHP1O15259 732 aa15.99■□□□□ 0.15
KIF3A-201ENST00000378735 TNNT3P45378 269 aaPredicted RBP15.99■□□□□ 0.15
KIF3A-201ENST00000378735 ATL3Q6DD88 541 aa15.99■□□□□ 0.15
KIF3A-201ENST00000378735 NBPF11Q86T75 865 aa15.99■□□□□ 0.15
KIF3A-201ENST00000378735 BLOC1S2Q6QNY1 142 aa15.99■□□□□ 0.15
KIF3A-201ENST00000378735 KRBA2Q6ZNG9 492 aa15.99■□□□□ 0.15
KIF3A-201ENST00000378735 IQUBQ8NA54 791 aa15.99■□□□□ 0.15
KIF3A-201ENST00000378735 EVI5LQ96CN4 794 aa15.98■□□□□ 0.15
KIF3A-201ENST00000378735 NUDT16Q96DE0 195 aaKnown RBP15.98■□□□□ 0.15
KIF3A-201ENST00000378735 BPIFA3Q9BQP9 254 aa15.98■□□□□ 0.15
KIF3A-201ENST00000378735 TADA3O75528 432 aa15.98■□□□□ 0.15
KIF3A-201ENST00000378735 RPS6KB1P23443 525 aa15.98■□□□□ 0.15
KIF3A-201ENST00000378735 TSGA10IPQ3SY00 556 aa15.98■□□□□ 0.15
KIF3A-201ENST00000378735 NEK11Q8NG66 645 aa15.98■□□□□ 0.15
KIF3A-201ENST00000378735 GOLGA5Q8TBA6 731 aa15.98■□□□□ 0.15
KIF3A-201ENST00000378735 GPATCH3Q96I76 525 aa15.98■□□□□ 0.15
KIF3A-201ENST00000378735 AK7Q96M32 723 aa15.98■□□□□ 0.15
KIF3A-201ENST00000378735 MIS18AQ9NYP9 233 aa15.98■□□□□ 0.15
KIF3A-201ENST00000378735 RCOR1Q9UKL0 485 aa15.98■□□□□ 0.15
KIF3A-201ENST00000378735 ZSCAN26Q16670 478 aa15.97■□□□□ 0.15
KIF3A-201ENST00000378735 EXOC4Q96A65 974 aa15.97■□□□□ 0.15
KIF3A-201ENST00000378735 SLC27A2O14975 620 aa15.97■□□□□ 0.15
KIF3A-201ENST00000378735 SFPQP23246 707 aaKnown RBP eCLIP15.97■□□□□ 0.15
KIF3A-201ENST00000378735 TRERF1Q96PN7 1200 aa15.97■□□□□ 0.15
KIF3A-201ENST00000378735 DNAI1Q9UI46 699 aa15.97■□□□□ 0.15
KIF3A-201ENST00000378735 LRRFIP1Q32MZ4 808 aaKnown RBP15.97■□□□□ 0.15
KIF3A-201ENST00000378735 CCDC73Q6ZRK6 1079 aa15.97■□□□□ 0.15
KIF3A-201ENST00000378735 LRRN4CLQ8ND94 238 aa15.97■□□□□ 0.15
KIF3A-201ENST00000378735 MNS1Q8NEH6 495 aa15.97■□□□□ 0.15
KIF3A-201ENST00000378735 SMARCE1Q969G3 411 aa15.97■□□□□ 0.15
KIF3A-201ENST00000378735 BABAM1Q9NWV8 329 aa15.97■□□□□ 0.15
KIF3A-201ENST00000378735 HMG20BQ9P0W2 317 aa15.97■□□□□ 0.15
KIF3A-201ENST00000378735 NOP2P46087 812 aaKnown RBP15.96■□□□□ 0.15
KIF3A-201ENST00000378735 NFATC2IPQ8NCF5 419 aa15.96■□□□□ 0.15
KIF3A-201ENST00000378735 ECHDC1Q9NTX5 307 aa15.96■□□□□ 0.15
KIF3A-201ENST00000378735 RSPH14Q9UHP6 348 aa15.96■□□□□ 0.15
KIF3A-201ENST00000378735 NALCNQ8IZF0 1738 aa15.96■□□□□ 0.15
KIF3A-201ENST00000378735 MYO1CO00159 1063 aa15.96■□□□□ 0.15
KIF3A-201ENST00000378735 SRGAP3O43295 1099 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms