RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 IFNL1Q8IU54 200 aa7.95□□□□□ -1.14
CDKAL1-202ENST00000378610 RNF214Q8ND24 703 aa7.95□□□□□ -1.14
CDKAL1-202ENST00000378610 CHAMP1Q96JM3 812 aa7.95□□□□□ -1.14
CDKAL1-202ENST00000378610 PAXBP1Q9Y5B6 917 aa7.95□□□□□ -1.14
CDKAL1-202ENST00000378610 KIAA0232Q92628 1395 aa7.95□□□□□ -1.14
CDKAL1-202ENST00000378610 EIF3JO75822 258 aaKnown RBP7.95□□□□□ -1.14
CDKAL1-202ENST00000378610 MMP14P50281 582 aa7.95□□□□□ -1.14
CDKAL1-202ENST00000378610 MORC1Q86VD1 984 aa7.95□□□□□ -1.14
CDKAL1-202ENST00000378610 TMX3Q96JJ7 454 aa7.95□□□□□ -1.14
CDKAL1-202ENST00000378610 COL4A3BPQ9Y5P4 624 aa7.95□□□□□ -1.14
CDKAL1-202ENST00000378610 GADD45BO75293 160 aaPredicted RBP7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 PLEKHG6Q3KR16 790 aa7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 RPUSD2Q8IZ73 545 aaKnown RBP7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 IRF2BPLQ9H1B7 796 aa7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 CALCOCO1Q9P1Z2 691 aa7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 PRR12Q9ULL5 1215 aa7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 SALL3Q9BXA9 1300 aa7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 CPSF1Q10570 1443 aaKnown RBP7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 VGLL3A8MV65 326 aa7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 PTMAP06454 111 aaKnown RBP7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 MRPL58Q14197 206 aaKnown RBP7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 ELOAQ14241 798 aaKnown RBP7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 DNTTIP2Q5QJE6 756 aaKnown RBP7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 ZNF771Q7L3S4 317 aaPredicted RBP7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 KRT222Q8N1A0 295 aa7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 NOVA2Q9UNW9 492 aaKnown RBP7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 METTL16Q86W50 562 aaKnown RBP7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 UBXN6Q9BZV1 441 aa7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 MAF1Q9H063 256 aa7.94□□□□□ -1.14
CDKAL1-202ENST00000378610 NRKQ7Z2Y5 1582 aa7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 ZNF853P0CG23 659 aa7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 RBM6P78332 1123 aaKnown RBP7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 MUM1L1Q5H9M0 696 aa7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 EFCAB2Q5VUJ9 269 aa7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 RIC3Q7Z5B4 369 aa7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 USP48Q86UV5 1035 aa7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 CFAP53Q96M91 514 aa7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 XRN1Q8IZH2 1706 aaKnown RBP7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 ZFYVE9O95405 1425 aa7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 SDSP20132 328 aa7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 CHAF1AQ13111 956 aaPredicted RBP7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 TSHZ1Q6ZSZ6 1077 aa7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 STAG1Q8WVM7 1258 aa7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 EFCC1Q9HA90 598 aa7.93□□□□□ -1.14
CDKAL1-202ENST00000378610 LMTK3Q96Q04 1460 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 VAMP4O75379 141 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 KCNJ4P48050 445 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 KMT5BQ4FZB7 885 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 PLA2G4DQ86XP0 818 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 ZNF397Q8NF99 534 aaPredicted RBP7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 HMX1Q9NP08 348 aaPredicted RBP7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 FEZ2Q9UHY8 353 aaPredicted RBP7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 MRPL42Q9Y6G3 142 aaKnown RBP7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 MCCP23508 829 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 BMS1Q14692 1282 aaKnown RBP7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 RBM43Q6ZSC3 357 aaKnown RBP7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 NYAP1Q6ZVC0 841 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 NFATC2IPQ8NCF5 419 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 ADGRL3Q9HAR2 1447 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 REC8O95072 547 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 TBX4P57082 545 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 UBE2HP62256 183 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 ZNF579Q8NAF0 562 aaKnown RBP7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 CAPN10Q9HC96 672 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 PCDH12Q9NPG4 1184 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 ZNF446Q9NWS9 450 aa7.92□□□□□ -1.14
CDKAL1-202ENST00000378610 ABCC3O15438 1527 aa7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 HOXA2O43364 376 aa7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 H2AFXP16104 143 aaPredicted RBP7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 CDC25BP30305 580 aa7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 CLEC4GQ6UXB4 293 aa7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 L3MBTL3Q96JM7 780 aaPredicted RBP7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 GEMIN8Q9NWZ8 242 aaKnown RBP7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 ADGRF5Q8IZF2 1346 aa7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 MAP2P11137 1827 aaKnown RBP7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 ERC2O15083 957 aa7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 SPAG9O60271 1321 aaKnown RBP7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 HCLS1P14317 486 aaPredicted RBP7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 TNNI2P48788 182 aa7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 C4orf46Q504U0 113 aa7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 ZNF746Q6NUN9 644 aaPredicted RBP7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 SPDYE1Q8NFV5 336 aaPredicted RBP7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 WDR33Q9C0J8 1336 aaKnown RBP7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 YTHDC2Q9H6S0 1430 aaKnown RBP7.91□□□□□ -1.14
CDKAL1-202ENST00000378610 PTPRCP08575 1304 aa7.9□□□□□ -1.14
CDKAL1-202ENST00000378610 HMGB1P1B2RPK0 211 aaPredicted RBP7.9□□□□□ -1.14
CDKAL1-202ENST00000378610 ANKRD44Q8N8A2 993 aa7.9□□□□□ -1.14
CDKAL1-202ENST00000378610 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.9□□□□□ -1.14
CDKAL1-202ENST00000378610 NOP2P46087 812 aaKnown RBP7.9□□□□□ -1.14
CDKAL1-202ENST00000378610 RHBDL3P58872 404 aa7.9□□□□□ -1.14
CDKAL1-202ENST00000378610 ATG3Q9NT62 314 aa7.9□□□□□ -1.14
CDKAL1-202ENST00000378610 IFT57Q9NWB7 429 aa7.9□□□□□ -1.14
CDKAL1-202ENST00000378610 FAM208AQ9UK61 1670 aaKnown RBP7.9□□□□□ -1.15
CDKAL1-202ENST00000378610 CCDC171Q6TFL3 1326 aa7.9□□□□□ -1.15
CDKAL1-202ENST00000378610 RGPD1P0DJD0 1748 aa7.89□□□□□ -1.15
CDKAL1-202ENST00000378610 DNAJA1P31689 397 aaKnown RBP7.89□□□□□ -1.15
CDKAL1-202ENST00000378610 C11orf96Q7Z7L8 435 aa7.89□□□□□ -1.15
CDKAL1-202ENST00000378610 MTA3Q9BTC8 594 aa7.89□□□□□ -1.15
CDKAL1-202ENST00000378610 BRINP2Q9C0B6 783 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms