RNA–Protein interactions for RNA: ENST00000378383.5

FNDC3A-201, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 2 BASIC

Gene FNDC3A, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-201ENST00000378383 NECTIN1Q15223 517 aa11.69□□□□□ -0.54
FNDC3A-201ENST00000378383 CCDC183Q5T5S1 534 aa11.69□□□□□ -0.54
FNDC3A-201ENST00000378383 SND1Q7KZF4 910 aaKnown RBP eCLIP11.69□□□□□ -0.54
FNDC3A-201ENST00000378383 ANKLE2Q86XL3 938 aa11.69□□□□□ -0.54
FNDC3A-201ENST00000378383 CALR3Q96L12 384 aaKnown RBP11.69□□□□□ -0.54
FNDC3A-201ENST00000378383 DIAPH3Q9NSV4 1193 aa11.69□□□□□ -0.54
FNDC3A-201ENST00000378383 C1orf141Q5JVX7 400 aa11.68□□□□□ -0.54
FNDC3A-201ENST00000378383 CWC27Q6UX04 472 aaKnown RBP11.68□□□□□ -0.54
FNDC3A-201ENST00000378383 EMILIN3Q9NT22 766 aa11.68□□□□□ -0.54
FNDC3A-201ENST00000378383 C9orf78Q9NZ63 289 aaPredicted RBP11.68□□□□□ -0.54
FNDC3A-201ENST00000378383 MAP3K2Q9Y2U5 619 aa11.68□□□□□ -0.54
FNDC3A-201ENST00000378383 GADD45BO75293 160 aaPredicted RBP11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 F13A1P00488 732 aa11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 GCP02774 474 aa11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 CCDC125Q86Z20 511 aa11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 DHX37Q8IY37 1157 aaKnown RBP11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 DDX21Q9NR30 783 aaKnown RBP eCLIP11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 SMC3Q9UQE7 1217 aa11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 ZNF142P52746 1687 aaPredicted RBP11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 ADAMTSL3P82987 1691 aa11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 RGPD2P0DJD1 1756 aa11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 TCHHQ07283 1943 aa11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 DDX58O95786 925 aaKnown RBP11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 MAP4K4O95819 1239 aaPredicted RBP11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 IFIT2P09913 472 aaKnown RBP11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 MPRIPQ6WCQ1 1025 aa11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 MAP4K1Q92918 833 aa11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 CYP46A1Q9Y6A2 500 aa11.67□□□□□ -0.54
FNDC3A-201ENST00000378383 MRC1P22897 1456 aa11.66□□□□□ -0.54
FNDC3A-201ENST00000378383 CCDC171Q6TFL3 1326 aa11.66□□□□□ -0.54
FNDC3A-201ENST00000378383 GRM8O00222 908 aa11.66□□□□□ -0.54
FNDC3A-201ENST00000378383 CASTP20810 708 aaKnown RBP11.66□□□□□ -0.54
FNDC3A-201ENST00000378383 OS9Q13438 667 aaPredicted RBP11.66□□□□□ -0.54
FNDC3A-201ENST00000378383 TSGA10IPQ3SY00 556 aa11.66□□□□□ -0.54
FNDC3A-201ENST00000378383 NOL8Q76FK4 1167 aaKnown RBP11.66□□□□□ -0.54
FNDC3A-201ENST00000378383 SPG7Q9UQ90 795 aa11.66□□□□□ -0.54
FNDC3A-201ENST00000378383 JCADQ9P266 1359 aa11.66□□□□□ -0.54
FNDC3A-201ENST00000378383 PXDNQ92626 1479 aa11.66□□□□□ -0.54
FNDC3A-201ENST00000378383 ABCC6O95255 1503 aa11.65□□□□□ -0.54
FNDC3A-201ENST00000378383 SPDYE16A6NNV3 312 aaPredicted RBP11.65□□□□□ -0.54
FNDC3A-201ENST00000378383 ZKSCAN1P17029 563 aaPredicted RBP11.65□□□□□ -0.54
FNDC3A-201ENST00000378383 PSMA5P28066 241 aa11.65□□□□□ -0.54
FNDC3A-201ENST00000378383 HSP90AA2PQ14568 343 aaPredicted RBP11.65□□□□□ -0.54
FNDC3A-201ENST00000378383 KAZALD1Q96I82 304 aa11.65□□□□□ -0.54
FNDC3A-201ENST00000378383 MS4A4AQ96JQ5 239 aa11.65□□□□□ -0.54
FNDC3A-201ENST00000378383 PDRG1Q9NUG6 133 aa11.65□□□□□ -0.54
FNDC3A-201ENST00000378383 COL15A1P39059 1388 aa11.65□□□□□ -0.54
FNDC3A-201ENST00000378383 PTH1RQ03431 593 aa11.65□□□□□ -0.54
FNDC3A-201ENST00000378383 ESCO1Q5FWF5 840 aa11.65□□□□□ -0.54
FNDC3A-201ENST00000378383 LRRC59Q96AG4 307 aaKnown RBP11.65□□□□□ -0.54
FNDC3A-201ENST00000378383 MTMR6Q9Y217 621 aa11.65□□□□□ -0.54
FNDC3A-201ENST00000378383 SASH1O94885 1247 aa11.64□□□□□ -0.55
FNDC3A-201ENST00000378383 PROSER3Q2NL68 480 aa11.64□□□□□ -0.55
FNDC3A-201ENST00000378383 USTQ9Y2C2 406 aa11.64□□□□□ -0.55
FNDC3A-201ENST00000378383 ANXA1P04083 346 aa11.64□□□□□ -0.55
FNDC3A-201ENST00000378383 G3BP1Q13283 466 aaKnown RBP eCLIP11.64□□□□□ -0.55
FNDC3A-201ENST00000378383 ANKRD1Q15327 319 aa11.64□□□□□ -0.55
FNDC3A-201ENST00000378383 LARP1Q6PKG0 1096 aaKnown RBP11.64□□□□□ -0.55
FNDC3A-201ENST00000378383 TICAM2Q86XR7 235 aa11.64□□□□□ -0.55
FNDC3A-201ENST00000378383 ANKRD24Q8TF21 1146 aa11.64□□□□□ -0.55
FNDC3A-201ENST00000378383 JAKMIP1Q96N16 626 aaKnown RBP11.64□□□□□ -0.55
FNDC3A-201ENST00000378383 FUCA2Q9BTY2 467 aa11.64□□□□□ -0.55
FNDC3A-201ENST00000378383 GDPD2Q9HCC8 539 aa11.64□□□□□ -0.55
FNDC3A-201ENST00000378383 CNPY2Q9Y2B0 182 aa11.64□□□□□ -0.55
FNDC3A-201ENST00000378383 RFX7Q2KHR2 1363 aa11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 POM121CA8CG34 1229 aa11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 PDCP20941 246 aa11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 GJB2P29033 226 aa11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 ADCK5Q3MIX3 580 aa11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 CREB3L3Q68CJ9 461 aa11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 PRPF40BQ6NWY9 871 aaKnown RBP11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 AACSQ86V21 672 aa11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 GLMNQ92990 594 aa11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 PBXIP1Q96AQ6 731 aa11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 EAF2Q96CJ1 260 aaPredicted RBP11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 SUCLG2Q96I99 432 aa11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.63□□□□□ -0.555e-9■■□□□ 13.2
FNDC3A-201ENST00000378383 HMG20BQ9P0W2 317 aa11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 ELP1O95163 1332 aa11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 TRPM3Q9HCF6 1732 aaPredicted RBP11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 SETD1BQ9UPS6 1966 aaKnown RBP11.63□□□□□ -0.55
FNDC3A-201ENST00000378383 MED23Q9ULK4 1368 aa11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 LARGE1O95461 756 aa11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 CWF19L2Q2TBE0 894 aaKnown RBP11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 PPP1R15BQ5SWA1 713 aa11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 RNF20Q5VTR2 975 aa11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 RNF214Q8ND24 703 aa11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 PDCL3Q9H2J4 239 aa11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 BICC1Q9H694 974 aaKnown RBP11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 POLR3EQ9NVU0 708 aa11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 PA2G4Q9UQ80 394 aaKnown RBP11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 RBM8AQ9Y5S9 174 aaKnown RBP11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 ST3GAL1Q11201 340 aa11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 ME3Q16798 604 aa11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 GLIPR1L2Q4G1C9 344 aa11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 USPL1Q5W0Q7 1092 aa11.62□□□□□ -0.55
FNDC3A-201ENST00000378383 NPHP4O75161 1426 aaPredicted RBP11.61□□□□□ -0.55
FNDC3A-201ENST00000378383 IGKV5-2P06315 115 aa11.61□□□□□ -0.55
FNDC3A-201ENST00000378383 PRR29P0C7W0 189 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms