RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 BLMP54132 1417 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-202ENST00000378161 CDKL5O76039 1030 aa13.51□□□□□ -0.25
NPHP4-202ENST00000378161 MCM3P25205 808 aa13.51□□□□□ -0.25
NPHP4-202ENST00000378161 ATP2B2Q01814 1243 aa13.51□□□□□ -0.25
NPHP4-202ENST00000378161 ADCY2Q08462 1091 aa13.51□□□□□ -0.25
NPHP4-202ENST00000378161 GPR161Q8N6U8 529 aaKnown RBP13.51□□□□□ -0.25
NPHP4-202ENST00000378161 IQCGQ9H095 443 aaKnown RBP13.51□□□□□ -0.25
NPHP4-202ENST00000378161 HOOK1Q9UJC3 728 aaKnown RBP13.51□□□□□ -0.25
NPHP4-202ENST00000378161 DUOX2Q9NRD8 1548 aa13.51□□□□□ -0.25
NPHP4-202ENST00000378161 CAVIN2O95810 425 aa13.51□□□□□ -0.25
NPHP4-202ENST00000378161 RBM5P52756 815 aaKnown RBP eCLIP13.51□□□□□ -0.25
NPHP4-202ENST00000378161 G3BP2Q9UN86 482 aaKnown RBP13.51□□□□□ -0.25
NPHP4-202ENST00000378161 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 RPSAP08865 295 aaKnown RBP13.5□□□□□ -0.25
NPHP4-202ENST00000378161 HNRNPH1P31943 449 aaKnown RBP13.5□□□□□ -0.25
NPHP4-202ENST00000378161 RBM6P78332 1123 aaKnown RBP13.5□□□□□ -0.25
NPHP4-202ENST00000378161 KRT85P78386 507 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 CCDC121Q6ZUS5 278 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 PPP2R3AQ06190 1150 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 CKAP2LQ8IYA6 745 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 CCDC150Q8NCX0 1101 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 CNNM3Q8NE01 707 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 FAM76AQ8TAV0 307 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 PLEKHG2Q9H7P9 1386 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 BUB1BO60566 1050 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-202ENST00000378161 ZGPATQ8N5A5 531 aaKnown RBP13.5□□□□□ -0.25
NPHP4-202ENST00000378161 PDILTQ8N807 584 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 STAG1Q8WVM7 1258 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 C14orf93Q9H972 538 aaKnown RBP13.5□□□□□ -0.25
NPHP4-202ENST00000378161 PRPHP41219 470 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 GNG11P61952 73 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 WHAMMP3Q1A5X7 153 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 CWC27Q6UX04 472 aaKnown RBP13.5□□□□□ -0.25
NPHP4-202ENST00000378161 CLEC17AQ6ZS10 378 aa13.5□□□□□ -0.25
NPHP4-202ENST00000378161 CCT5P48643 541 aa13.49□□□□□ -0.25
NPHP4-202ENST00000378161 SULT6B1Q6IMI4 303 aa13.49□□□□□ -0.25
NPHP4-202ENST00000378161 TBC1D9Q6ZT07 1266 aa13.49□□□□□ -0.25
NPHP4-202ENST00000378161 NDUFAB1O14561 156 aa13.49□□□□□ -0.25
NPHP4-202ENST00000378161 SNCBQ16143 134 aa13.49□□□□□ -0.25
NPHP4-202ENST00000378161 CEP57L1Q8IYX8 460 aa13.49□□□□□ -0.25
NPHP4-202ENST00000378161 CNTROBQ8N137 903 aa13.49□□□□□ -0.25
NPHP4-202ENST00000378161 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.49□□□□□ -0.25
NPHP4-202ENST00000378161 LRRFIP1Q32MZ4 808 aaKnown RBP13.49□□□□□ -0.25
NPHP4-202ENST00000378161 SURF6O75683 361 aaKnown RBP13.48□□□□□ -0.25
NPHP4-202ENST00000378161 HHATQ5VTY9 493 aa13.48□□□□□ -0.25
NPHP4-202ENST00000378161 ENO4A6NNW6 628 aa13.48□□□□□ -0.25
NPHP4-202ENST00000378161 INF2Q27J81 1249 aa13.48□□□□□ -0.25
NPHP4-202ENST00000378161 ZBTB10Q96DT7 871 aa13.48□□□□□ -0.25
NPHP4-202ENST00000378161 BIN2Q9UBW5 565 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-202ENST00000378161 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
NPHP4-202ENST00000378161 EFCAB8A8MWE9 144 aa13.48□□□□□ -0.25
NPHP4-202ENST00000378161 ZNF75DP51815 510 aa13.48□□□□□ -0.25
NPHP4-202ENST00000378161 ANO6Q4KMQ2 910 aa13.48□□□□□ -0.25
NPHP4-202ENST00000378161 MSL1Q68DK7 614 aa13.48□□□□□ -0.25
NPHP4-202ENST00000378161 TCHPQ9BT92 498 aa13.48□□□□□ -0.25
NPHP4-202ENST00000378161 PDE11AQ9HCR9 933 aa13.48□□□□□ -0.25
NPHP4-202ENST00000378161 BRD3Q15059 726 aa13.48□□□□□ -0.25
NPHP4-202ENST00000378161 FMNL2Q96PY5 1086 aa13.48□□□□□ -0.25
NPHP4-202ENST00000378161 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.48□□□□□ -0.25
NPHP4-202ENST00000378161 TUBBP07437 444 aa13.47□□□□□ -0.25
NPHP4-202ENST00000378161 GSCP56915 257 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-202ENST00000378161 NEXNQ0ZGT2 675 aa13.47□□□□□ -0.25
NPHP4-202ENST00000378161 RINLQ6ZS11 566 aa13.47□□□□□ -0.25
NPHP4-202ENST00000378161 SRCIN1Q9C0H9 1055 aa13.47□□□□□ -0.25
NPHP4-202ENST00000378161 NOS1P29475 1434 aa13.47□□□□□ -0.25
NPHP4-202ENST00000378161 AKAP17AQ02040 695 aaKnown RBP13.47□□□□□ -0.25
NPHP4-202ENST00000378161 C1orf141Q5JVX7 400 aa13.47□□□□□ -0.25
NPHP4-202ENST00000378161 CLASRPQ8N2M8 674 aaKnown RBP13.47□□□□□ -0.25
NPHP4-202ENST00000378161 PLEKHA4Q9H4M7 779 aa13.47□□□□□ -0.25
NPHP4-202ENST00000378161 A2MP01023 1474 aa13.47□□□□□ -0.25
NPHP4-202ENST00000378161 SMIM24O75264 130 aa13.47□□□□□ -0.25
NPHP4-202ENST00000378161 TUBB4BP68371 445 aa13.47□□□□□ -0.25
NPHP4-202ENST00000378161 TYRO3Q06418 890 aa13.47□□□□□ -0.25
NPHP4-202ENST00000378161 G3BP1Q13283 466 aaKnown RBP eCLIP13.47□□□□□ -0.25
NPHP4-202ENST00000378161 FAM71BQ8TC56 605 aa13.47□□□□□ -0.25
NPHP4-202ENST00000378161 THUMPD2Q9BTF0 503 aaKnown RBP13.47□□□□□ -0.25
NPHP4-202ENST00000378161 DISP1Q96F81 1524 aa13.47□□□□□ -0.25
NPHP4-202ENST00000378161 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
NPHP4-202ENST00000378161 SYCP2Q9BX26 1530 aa13.46□□□□□ -0.25
NPHP4-202ENST00000378161 AP1G2O75843 785 aa13.46□□□□□ -0.25
NPHP4-202ENST00000378161 KIF9Q9HAQ2 790 aa13.46□□□□□ -0.25
NPHP4-202ENST00000378161 NUCB1Q02818 461 aa13.46□□□□□ -0.25
NPHP4-202ENST00000378161 FBXW10Q5XX13 1052 aa13.46□□□□□ -0.25
NPHP4-202ENST00000378161 TBC1D31Q96DN5 1066 aa13.46□□□□□ -0.25
NPHP4-202ENST00000378161 DDX58O95786 925 aaKnown RBP13.46□□□□□ -0.26
NPHP4-202ENST00000378161 PDCP20941 246 aa13.46□□□□□ -0.26
NPHP4-202ENST00000378161 PLA2G4AP47712 749 aa13.46□□□□□ -0.26
NPHP4-202ENST00000378161 E2F5Q15329 346 aa13.46□□□□□ -0.26
NPHP4-202ENST00000378161 TRIM74Q86UV6 250 aa13.46□□□□□ -0.26
NPHP4-202ENST00000378161 TRIM73Q86UV7 250 aa13.46□□□□□ -0.26
NPHP4-202ENST00000378161 CAGE1Q8TC20 777 aa13.46□□□□□ -0.26
NPHP4-202ENST00000378161 RBM33Q96EV2 1170 aaKnown RBP13.46□□□□□ -0.26
NPHP4-202ENST00000378161 FAN1Q9Y2M0 1017 aa13.46□□□□□ -0.26
NPHP4-202ENST00000378161 KIF4BQ2VIQ3 1234 aa13.46□□□□□ -0.26
NPHP4-202ENST00000378161 SPATS2Q86XZ4 545 aaKnown RBP13.46□□□□□ -0.26
NPHP4-202ENST00000378161 SDF4Q9BRK5 362 aa13.46□□□□□ -0.26
NPHP4-202ENST00000378161 UPF3BQ9BZI7 483 aaKnown RBP13.46□□□□□ -0.26
NPHP4-202ENST00000378161 DDX19AQ9NUU7 478 aaKnown RBP13.46□□□□□ -0.26
NPHP4-202ENST00000378161 ZNF446Q9NWS9 450 aa13.46□□□□□ -0.26
NPHP4-202ENST00000378161 WHAMMQ8TF30 809 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms