RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 HMGB1P09429 215 aaKnown RBP12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 GPTP24298 496 aa12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 CCT4P50991 539 aaKnown RBP12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 IP6K1Q92551 441 aa12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 DONSONQ9NYP3 566 aa12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 LCMT1Q9UIC8 334 aa12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 EXOC6BQ9Y2D4 811 aa12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 BCL9LQ86UU0 1499 aa12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 AATKQ6ZMQ8 1374 aa12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 ECM2O94769 699 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 C8orf58Q8NAV2 365 aa12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 NEK11Q8NG66 645 aa12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 LAMB2P55268 1798 aa12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 TRIM27P14373 513 aa12.8□□□□□ -0.36
PCDHGA1-201ENST00000378105 ATP5J2-PTCD1G3V325 749 aa12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 NBPF9Q3BBW0 867 aa12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 PPP1R9BQ96SB3 815 aa12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 SYT10Q6XYQ8 523 aa12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 TSPYL6Q8N831 410 aa12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 MYD88Q99836 296 aa12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 ANKRD36CQ5JPF3 1778 aa12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 H0YHG0 523 aa12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 IBSPP21815 317 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 SARNPP82979 210 aaKnown RBP12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 DDB1Q16531 1140 aa12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 CCDC27Q2M243 656 aa12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 FOXD4L5Q5VV16 416 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 FOXD4L4Q8WXT5 416 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 CCDC97Q96F63 343 aaPredicted RBP12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 FMNL2Q96PY5 1086 aa12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 DEF6Q9H4E7 631 aa12.79□□□□□ -0.36
PCDHGA1-201ENST00000378105 GABPB1Q06547 395 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA1-201ENST00000378105 NBPF6Q5VWK0 638 aa12.78□□□□□ -0.36
PCDHGA1-201ENST00000378105 NBPF5PQ86XG9 351 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA1-201ENST00000378105 OTUD6BQ8N6M0 293 aa12.78□□□□□ -0.36
PCDHGA1-201ENST00000378105 NBPF4Q96M43 638 aa12.78□□□□□ -0.36
PCDHGA1-201ENST00000378105 FLIIQ13045 1269 aa12.78□□□□□ -0.36
PCDHGA1-201ENST00000378105 CNNM1Q9NRU3 951 aa12.78□□□□□ -0.36
PCDHGA1-201ENST00000378105 UBR3Q6ZT12 1888 aa12.78□□□□□ -0.36
PCDHGA1-201ENST00000378105 NRXN2Q9P2S2 1712 aa12.78□□□□□ -0.36
PCDHGA1-201ENST00000378105 GOLGA6L6A8MZA4 724 aa12.78□□□□□ -0.36
PCDHGA1-201ENST00000378105 KIAA2012Q0VF49 1180 aa12.78□□□□□ -0.36
PCDHGA1-201ENST00000378105 HSP90AB4PQ58FF6 505 aa12.78□□□□□ -0.36
PCDHGA1-201ENST00000378105 IL2RBP14784 551 aa12.78□□□□□ -0.36
PCDHGA1-201ENST00000378105 TNNQ9UQP3 1299 aa12.78□□□□□ -0.36
PCDHGA1-201ENST00000378105 PI4KAP2A4QPH2 592 aa12.77□□□□□ -0.36
PCDHGA1-201ENST00000378105 SETQ01105 290 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA1-201ENST00000378105 SF3A1Q15459 793 aaKnown RBP12.77□□□□□ -0.36
PCDHGA1-201ENST00000378105 PI4KAP1Q8N8J0 262 aa12.77□□□□□ -0.36
PCDHGA1-201ENST00000378105 DDX49Q9Y6V7 483 aaKnown RBP12.77□□□□□ -0.36
PCDHGA1-201ENST00000378105 SBNO1A3KN83 1393 aa12.77□□□□□ -0.36
PCDHGA1-201ENST00000378105 TNS3Q68CZ2 1445 aa12.77□□□□□ -0.36
PCDHGA1-201ENST00000378105 COL5A2P05997 1499 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA1-201ENST00000378105 MAP4K4O95819 1239 aaPredicted RBP12.77□□□□□ -0.37
PCDHGA1-201ENST00000378105 PLCB2Q00722 1185 aa12.77□□□□□ -0.37
PCDHGA1-201ENST00000378105 KCPQ6ZWJ8 1503 aa12.77□□□□□ -0.37
PCDHGA1-201ENST00000378105 ANKRD65E5RJM6 399 aa12.77□□□□□ -0.37
PCDHGA1-201ENST00000378105 COL4A1P02462 1669 aa12.77□□□□□ -0.37
PCDHGA1-201ENST00000378105 IL13P35225 146 aa12.77□□□□□ -0.37
PCDHGA1-201ENST00000378105 DBF4Q9UBU7 674 aaPredicted RBP12.77□□□□□ -0.37
PCDHGA1-201ENST00000378105 ATL2Q8NHH9 583 aa12.76□□□□□ -0.37
PCDHGA1-201ENST00000378105 KIF13BQ9NQT8 1826 aa12.76□□□□□ -0.37
PCDHGA1-201ENST00000378105 MICALL1Q8N3F8 863 aa12.76□□□□□ -0.37
PCDHGA1-201ENST00000378105 RAI14Q9P0K7 980 aa12.76□□□□□ -0.37
PCDHGA1-201ENST00000378105 BRCA1P38398 1863 aaKnown RBP12.76□□□□□ -0.37
PCDHGA1-201ENST00000378105 KDRP35968 1356 aa12.76□□□□□ -0.37
PCDHGA1-201ENST00000378105 CCDC189A1A4V9 331 aa12.76□□□□□ -0.37
PCDHGA1-201ENST00000378105 ZNF521Q96K83 1311 aa12.75□□□□□ -0.37
PCDHGA1-201ENST00000378105 ECEL1O95672 775 aa12.75□□□□□ -0.37
PCDHGA1-201ENST00000378105 WASHC4Q2M389 1173 aa12.75□□□□□ -0.37
PCDHGA1-201ENST00000378105 CHPF2Q9P2E5 772 aa12.75□□□□□ -0.37
PCDHGA1-201ENST00000378105 DDX11L8A8MPP1 907 aa12.75□□□□□ -0.37
PCDHGA1-201ENST00000378105 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.75□□□□□ -0.37
PCDHGA1-201ENST00000378105 V9GYY5 206 aaPredicted RBP12.75□□□□□ -0.37
PCDHGA1-201ENST00000378105 CASQ1P31415 396 aa12.75□□□□□ -0.37
PCDHGA1-201ENST00000378105 CCDC57Q2TAC2 916 aa12.75□□□□□ -0.37
PCDHGA1-201ENST00000378105 ARL10Q8N8L6 244 aa12.75□□□□□ -0.37
PCDHGA1-201ENST00000378105 LGR6Q9HBX8 967 aa12.75□□□□□ -0.37
PCDHGA1-201ENST00000378105 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
PCDHGA1-201ENST00000378105 DNAAF4Q8WXU2 420 aa12.74□□□□□ -0.37
PCDHGA1-201ENST00000378105 CPDO75976 1380 aa12.74□□□□□ -0.37
PCDHGA1-201ENST00000378105 MYH14Q7Z406 1995 aaKnown RBP12.74□□□□□ -0.37
PCDHGA1-201ENST00000378105 MYO1CO00159 1063 aa12.74□□□□□ -0.37
PCDHGA1-201ENST00000378105 AKAP4Q5JQC9 854 aa12.74□□□□□ -0.37
PCDHGA1-201ENST00000378105 CHMP5Q9NZZ3 219 aa12.74□□□□□ -0.37
PCDHGA1-201ENST00000378105 TPD52L2O43399 206 aaKnown RBP12.74□□□□□ -0.37
PCDHGA1-201ENST00000378105 SMARCA5O60264 1052 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA1-201ENST00000378105 SCP2P22307 547 aa12.74□□□□□ -0.37
PCDHGA1-201ENST00000378105 GNL2Q13823 731 aaKnown RBP12.74□□□□□ -0.37
PCDHGA1-201ENST00000378105 NAIF1Q69YI7 327 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA1-201ENST00000378105 MPHOSPH8Q99549 860 aa12.74□□□□□ -0.37
PCDHGA1-201ENST00000378105 HMGN5P82970 282 aaKnown RBP12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 CAVIN1Q6NZI2 390 aaKnown RBP12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 FSD1Q9BTV5 496 aa12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 MAP3K2Q9Y2U5 619 aa12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 GOLGA6L4A6NEF3 574 aa12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 POLR3GO15318 223 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 LARP1Q6PKG0 1096 aaKnown RBP12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 GOLGA6L1Q8N7Z2 621 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms