RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 PTH1RQ03431 593 aa9.69□□□□□ -0.86
CKAP2-203ENST00000378037 COL24A1Q17RW2 1714 aa9.69□□□□□ -0.86
CKAP2-203ENST00000378037 GPR101Q96P66 508 aaPredicted RBP9.69□□□□□ -0.86
CKAP2-203ENST00000378037 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.69□□□□□ -0.86
CKAP2-203ENST00000378037 SYCE3A1L190 88 aa9.68□□□□□ -0.86
CKAP2-203ENST00000378037 ZPR1O75312 459 aa9.68□□□□□ -0.86
CKAP2-203ENST00000378037 IGKV5-2P06315 115 aa9.68□□□□□ -0.86
CKAP2-203ENST00000378037 BRF1Q92994 677 aa9.68□□□□□ -0.86
CKAP2-203ENST00000378037 SEC31BQ9NQW1 1179 aa9.68□□□□□ -0.86
CKAP2-203ENST00000378037 TFCP2L1Q9NZI6 479 aa9.68□□□□□ -0.86
CKAP2-203ENST00000378037 RBM8AQ9Y5S9 174 aaKnown RBP9.68□□□□□ -0.86
CKAP2-203ENST00000378037 PRDM1O75626 825 aa9.68□□□□□ -0.86
CKAP2-203ENST00000378037 TRDNQ13061 729 aa9.68□□□□□ -0.86
CKAP2-203ENST00000378037 LARP1BQ659C4 914 aaKnown RBP9.68□□□□□ -0.86
CKAP2-203ENST00000378037 OTUD7BQ6GQQ9 843 aa9.68□□□□□ -0.86
CKAP2-203ENST00000378037 ISM2Q6H9L7 571 aa9.68□□□□□ -0.86
CKAP2-203ENST00000378037 NCOA5Q9HCD5 579 aaKnown RBP9.68□□□□□ -0.86
CKAP2-203ENST00000378037 CDK12Q9NYV4 1490 aaPredicted RBP9.68□□□□□ -0.86
CKAP2-203ENST00000378037 A0A1B0GUL7 405 aa9.68□□□□□ -0.86
CKAP2-203ENST00000378037 LMO7Q8WWI1 1683 aa9.68□□□□□ -0.86
CKAP2-203ENST00000378037 AATKQ6ZMQ8 1374 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 ECM2O94769 699 aaPredicted RBP9.67□□□□□ -0.86
CKAP2-203ENST00000378037 AAMPQ13685 434 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 RNF20Q5VTR2 975 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 PTF1AQ7RTS3 328 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 USP26Q9BXU7 913 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 SRP68Q9UHB9 627 aaKnown RBP9.67□□□□□ -0.86
CKAP2-203ENST00000378037 A0A0D9SFI3 127 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 hCG_1642624A0A1W2PR95 340 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 ITGA6P23229 1130 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 TDO2P48775 406 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 MICU3Q86XE3 530 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 UIMC1Q96RL1 719 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 CICQ96RK0 1608 aaPredicted RBP9.67□□□□□ -0.86
CKAP2-203ENST00000378037 ADCK5Q3MIX3 580 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 VPS53Q5VIR6 699 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 TRMT1LQ7Z2T5 733 aaKnown RBP9.67□□□□□ -0.86
CKAP2-203ENST00000378037 NBPF5PQ86XG9 351 aaPredicted RBP9.67□□□□□ -0.86
CKAP2-203ENST00000378037 ERC1Q8IUD2 1116 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 MYL10Q9BUA6 226 aa9.67□□□□□ -0.86
CKAP2-203ENST00000378037 METTL22Q9BUU2 404 aaPredicted RBP9.67□□□□□ -0.86
CKAP2-203ENST00000378037 ARHGEF10O15013 1369 aa9.66□□□□□ -0.86
CKAP2-203ENST00000378037 PNPLA6Q8IY17 1366 aa9.66□□□□□ -0.86
CKAP2-203ENST00000378037 SPATA31A3Q5VYP0 1347 aa9.66□□□□□ -0.86
CKAP2-203ENST00000378037 NBPF26B4DH59 902 aa9.66□□□□□ -0.86
CKAP2-203ENST00000378037 POLR3DP05423 398 aaPredicted RBP9.66□□□□□ -0.86
CKAP2-203ENST00000378037 SLC9C2Q5TAH2 1124 aa9.66□□□□□ -0.86
CKAP2-203ENST00000378037 NBPF14Q5TI25 921 aa9.66□□□□□ -0.86
CKAP2-203ENST00000378037 NBPF10Q6P3W6 841 aaKnown RBP9.66□□□□□ -0.86
CKAP2-203ENST00000378037 NBPF15Q8N660 670 aa9.66□□□□□ -0.86
CKAP2-203ENST00000378037 GREM2Q9H772 168 aa9.66□□□□□ -0.86
CKAP2-203ENST00000378037 PCDH11XQ9BZA7 1347 aa9.66□□□□□ -0.86
CKAP2-203ENST00000378037 PCDH11YQ9BZA8 1340 aa9.66□□□□□ -0.86
CKAP2-203ENST00000378037 RIMBP2O15034 1052 aa9.66□□□□□ -0.86
CKAP2-203ENST00000378037 RASSF8Q8NHQ8 419 aa9.66□□□□□ -0.86
CKAP2-203ENST00000378037 ANKRD18BA2A2Z9 1011 aa9.65□□□□□ -0.86
CKAP2-203ENST00000378037 C6orf229H3BNL8 230 aa9.65□□□□□ -0.86
CKAP2-203ENST00000378037 RBM5P52756 815 aaKnown RBP eCLIP9.65□□□□□ -0.86
CKAP2-203ENST00000378037 AK2P54819 239 aa9.65□□□□□ -0.86
CKAP2-203ENST00000378037 CKAP2LQ8IYA6 745 aa9.65□□□□□ -0.86
CKAP2-203ENST00000378037 CMTR1Q8N1G2 835 aaKnown RBP9.65□□□□□ -0.86
CKAP2-203ENST00000378037 ERCC4Q92889 916 aaPredicted RBP9.65□□□□□ -0.86
CKAP2-203ENST00000378037 ZNF622Q969S3 477 aaKnown RBP eCLIP9.65□□□□□ -0.863e-8■■□□□ 13
CKAP2-203ENST00000378037 AIDAQ96BJ3 306 aa9.65□□□□□ -0.86
CKAP2-203ENST00000378037 USP21Q9UK80 565 aa9.65□□□□□ -0.86
CKAP2-203ENST00000378037 NSFL1CQ9UNZ2 370 aaKnown RBP9.65□□□□□ -0.86
CKAP2-203ENST00000378037 MAP2P11137 1827 aaKnown RBP9.65□□□□□ -0.86
CKAP2-203ENST00000378037 IGHMBP2P38935 993 aaKnown RBP9.65□□□□□ -0.86
CKAP2-203ENST00000378037 ATP2B3Q16720 1220 aa9.65□□□□□ -0.86
CKAP2-203ENST00000378037 SPC24Q8NBT2 197 aa9.65□□□□□ -0.86
CKAP2-203ENST00000378037 PXDNQ92626 1479 aa9.65□□□□□ -0.86
CKAP2-203ENST00000378037 COL18A1P39060 1754 aa9.65□□□□□ -0.86
CKAP2-203ENST00000378037 DDX11L8A8MPP1 907 aa9.65□□□□□ -0.86
CKAP2-203ENST00000378037 ZNF589Q86UQ0 364 aaPredicted RBP9.65□□□□□ -0.86
CKAP2-203ENST00000378037 RFC4P35249 363 aa9.64□□□□□ -0.87
CKAP2-203ENST00000378037 HSP90AA4PQ58FG1 418 aa9.64□□□□□ -0.87
CKAP2-203ENST00000378037 INCENPQ9NQS7 918 aa9.64□□□□□ -0.87
CKAP2-203ENST00000378037 DBNLQ9UJU6 430 aaKnown RBP9.64□□□□□ -0.87
CKAP2-203ENST00000378037 SASH1O94885 1247 aa9.64□□□□□ -0.87
CKAP2-203ENST00000378037 GPHNQ9NQX3 736 aaPredicted RBP9.64□□□□□ -0.87
CKAP2-203ENST00000378037 RGPD8O14715 1765 aaPredicted RBP9.64□□□□□ -0.87
CKAP2-203ENST00000378037 RANBP6O60518 1105 aaKnown RBP9.64□□□□□ -0.87
CKAP2-203ENST00000378037 TRIM37O94972 964 aa9.64□□□□□ -0.87
CKAP2-203ENST00000378037 ZAP70P43403 619 aa9.64□□□□□ -0.87
CKAP2-203ENST00000378037 HTATSF1O43719 755 aaKnown RBP9.63□□□□□ -0.87
CKAP2-203ENST00000378037 GJB2P29033 226 aa9.63□□□□□ -0.87
CKAP2-203ENST00000378037 APOBRQ0VD83 1088 aa9.63□□□□□ -0.87
CKAP2-203ENST00000378037 TNNI3KQ59H18 835 aa9.63□□□□□ -0.87
CKAP2-203ENST00000378037 FBXO41Q8TF61 875 aa9.63□□□□□ -0.87
CKAP2-203ENST00000378037 AK7Q96M32 723 aa9.63□□□□□ -0.87
CKAP2-203ENST00000378037 TAF6LQ9Y6J9 622 aa9.63□□□□□ -0.87
CKAP2-203ENST00000378037 FPGT-TNNI3KV9GXZ4 949 aa9.63□□□□□ -0.87
CKAP2-203ENST00000378037 SLIT3O75094 1523 aa9.63□□□□□ -0.87
CKAP2-203ENST00000378037 A0A087WWV3 80 aa9.63□□□□□ -0.87
CKAP2-203ENST00000378037 WTIPA6NIX2 430 aaPredicted RBP9.63□□□□□ -0.87
CKAP2-203ENST00000378037 CCNL1Q9UK58 526 aaPredicted RBP9.63□□□□□ -0.87
CKAP2-203ENST00000378037 CNPY2Q9Y2B0 182 aa9.63□□□□□ -0.87
CKAP2-203ENST00000378037 WDR17Q8IZU2 1322 aa9.63□□□□□ -0.87
CKAP2-203ENST00000378037 PES1O00541 588 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms