RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 FBXO31Q5XUX0 539 aaPredicted RBP10.13□□□□□ -0.79
PCDH9-202ENST00000377865 CEP112Q8N8E3 955 aa10.13□□□□□ -0.79
PCDH9-202ENST00000377865 BRF1Q92994 677 aa10.13□□□□□ -0.79
PCDH9-202ENST00000377865 LLPHQ9BRT6 129 aaKnown RBP10.13□□□□□ -0.79
PCDH9-202ENST00000377865 V9GYY5 206 aaPredicted RBP10.13□□□□□ -0.79
PCDH9-202ENST00000377865 UHRF1BP1LA0JNW5 1464 aa10.13□□□□□ -0.79
PCDH9-202ENST00000377865 ATP7BP35670 1465 aa10.13□□□□□ -0.79
PCDH9-202ENST00000377865 YEATS4O95619 227 aa10.13□□□□□ -0.79
PCDH9-202ENST00000377865 RPS6KB1P23443 525 aa10.13□□□□□ -0.79
PCDH9-202ENST00000377865 UBAC1Q9BSL1 405 aa10.13□□□□□ -0.79
PCDH9-202ENST00000377865 FAM193AP78312 1265 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 GOLGA1Q92805 767 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 CDK5RAP3Q96JB5 506 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 OSBPL3Q9H4L5 887 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 SYKP43405 635 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 GNG11P61952 73 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 NCOA7Q8NI08 942 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 CTAGE1Q96RT6 745 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 CHPF2Q9P2E5 772 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 ORC3Q9UBD5 711 aaPredicted RBP10.12□□□□□ -0.79
PCDH9-202ENST00000377865 KSR2Q6VAB6 950 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 BCL2L12Q9HB09 334 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 CBX8Q9HC52 389 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 USP16Q9Y5T5 823 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 FBLN1P23142 703 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 BRAPQ7Z569 592 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 EHBP1Q8NDI1 1231 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 AIDAQ96BJ3 306 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 TMX4Q9H1E5 349 aaPredicted RBP10.12□□□□□ -0.79
PCDH9-202ENST00000377865 DNAI1Q9UI46 699 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 SYCP1Q15431 976 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 HSP90AB2PQ58FF8 381 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 MICALCLQ6ZW33 695 aa10.12□□□□□ -0.79
PCDH9-202ENST00000377865 SETBP1Q9Y6X0 1596 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 GOLGA8AA7E2F4 631 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 FAM160A1Q05DH4 1040 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 CCDC12Q8WUD4 166 aaPredicted RBP10.11□□□□□ -0.79
PCDH9-202ENST00000377865 NUP133Q8WUM0 1156 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 ZFYP08048 801 aaPredicted RBP10.11□□□□□ -0.79
PCDH9-202ENST00000377865 HOXB7P09629 217 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 ATF3P18847 181 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 CEP152O94986 1710 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 BIN1O00499 593 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 TUBBP07437 444 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 TDO2P48775 406 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 LMAN1P49257 510 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 DMTNQ08495 405 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 TTF1Q15361 905 aaPredicted RBP10.11□□□□□ -0.79
PCDH9-202ENST00000377865 AATKQ6ZMQ8 1374 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 ZFYVE16Q7Z3T8 1539 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 CCDC191Q8NCU4 936 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.11□□□□□ -0.79
PCDH9-202ENST00000377865 QRICH2Q9H0J4 1663 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 GRM8O00222 908 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 SLC12A7Q9Y666 1083 aa10.11□□□□□ -0.79
PCDH9-202ENST00000377865 CDC25BP30305 580 aa10.1□□□□□ -0.79
PCDH9-202ENST00000377865 EIF5P55010 431 aaKnown RBP10.1□□□□□ -0.79
PCDH9-202ENST00000377865 CKAP4Q07065 602 aaKnown RBP10.1□□□□□ -0.79
PCDH9-202ENST00000377865 SPA17Q15506 151 aa10.1□□□□□ -0.79
PCDH9-202ENST00000377865 CUL4AQ13619 759 aa10.1□□□□□ -0.79
PCDH9-202ENST00000377865 KIAA1210Q9ULL0 1709 aa10.1□□□□□ -0.79
PCDH9-202ENST00000377865 SBNO1A3KN83 1393 aa10.1□□□□□ -0.79
PCDH9-202ENST00000377865 TUBB2AQ13885 445 aa10.1□□□□□ -0.79
PCDH9-202ENST00000377865 TUBB2BQ9BVA1 445 aa10.1□□□□□ -0.79
PCDH9-202ENST00000377865 SLC27A2O14975 620 aa10.1□□□□□ -0.79
PCDH9-202ENST00000377865 MYO1BO43795 1136 aa10.1□□□□□ -0.79
PCDH9-202ENST00000377865 U2AF2P26368 475 aaKnown RBP eCLIP10.1□□□□□ -0.79
PCDH9-202ENST00000377865 AKAP4Q5JQC9 854 aa10.1□□□□□ -0.79
PCDH9-202ENST00000377865 USHBP1Q8N6Y0 703 aa10.1□□□□□ -0.79
PCDH9-202ENST00000377865 GOLIM4O00461 696 aa10.1□□□□□ -0.79
PCDH9-202ENST00000377865 SPTLC2O15270 562 aa10.1□□□□□ -0.79
PCDH9-202ENST00000377865 METAP2P50579 478 aaKnown RBP eCLIP10.1□□□□□ -0.79
PCDH9-202ENST00000377865 NUP88Q99567 741 aaPredicted RBP10.1□□□□□ -0.79
PCDH9-202ENST00000377865 IQGAP1P46940 1657 aa10.09□□□□□ -0.79
PCDH9-202ENST00000377865 KRT24Q2M2I5 525 aa10.09□□□□□ -0.79
PCDH9-202ENST00000377865 RNF17Q9BXT8 1623 aaKnown RBP10.09□□□□□ -0.79
PCDH9-202ENST00000377865 CD2BP2O95400 341 aaKnown RBP10.09□□□□□ -0.79
PCDH9-202ENST00000377865 IARSP41252 1262 aaKnown RBP10.09□□□□□ -0.79
PCDH9-202ENST00000377865 MPRIPQ6WCQ1 1025 aa10.09□□□□□ -0.79
PCDH9-202ENST00000377865 LEO1Q8WVC0 666 aaPredicted RBP10.09□□□□□ -0.79
PCDH9-202ENST00000377865 SMARCC1Q92922 1105 aaPredicted RBP10.09□□□□□ -0.79
PCDH9-202ENST00000377865 SLC26A8Q96RN1 970 aa10.09□□□□□ -0.79
PCDH9-202ENST00000377865 PHF23Q9BUL5 403 aaPredicted RBP10.09□□□□□ -0.79
PCDH9-202ENST00000377865 CPSF1Q10570 1443 aaKnown RBP10.09□□□□□ -0.79
PCDH9-202ENST00000377865 BMP15O95972 392 aa10.09□□□□□ -0.79
PCDH9-202ENST00000377865 RNF41Q9H4P4 317 aaPredicted RBP10.09□□□□□ -0.79
PCDH9-202ENST00000377865 ABCA6Q8N139 1617 aa10.09□□□□□ -0.79
PCDH9-202ENST00000377865 PTPDC1A2A3K4 754 aa10.09□□□□□ -0.79
PCDH9-202ENST00000377865 USO1O60763 962 aaKnown RBP10.09□□□□□ -0.79
PCDH9-202ENST00000377865 CCDC175P0C221 793 aa10.09□□□□□ -0.79
PCDH9-202ENST00000377865 FKBP15Q5T1M5 1219 aa10.09□□□□□ -0.79
PCDH9-202ENST00000377865 CTR9Q6PD62 1173 aa10.09□□□□□ -0.79
PCDH9-202ENST00000377865 SYT10Q6XYQ8 523 aa10.09□□□□□ -0.79
PCDH9-202ENST00000377865 DHX32Q7L7V1 743 aaKnown RBP10.09□□□□□ -0.79
PCDH9-202ENST00000377865 STAP2Q9UGK3 403 aa10.09□□□□□ -0.79
PCDH9-202ENST00000377865 ARAP3Q8WWN8 1544 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 POLR3DP05423 398 aaPredicted RBP10.08□□□□□ -0.8
PCDH9-202ENST00000377865 PIP4K2BP78356 416 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 G2E3Q7L622 706 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 TNRQ92752 1358 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms