RNA–Protein interactions for RNA: ENST00000377197.7

C9orf135-201, Transcript of chromosome 9 open reading frame 135, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf135, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-201ENST00000377197 A0A087WZG4 1122 aa13.25□□□□□ -0.29
C9orf135-201ENST00000377197 SNRPA1P09661 255 aaKnown RBP13.25□□□□□ -0.29
C9orf135-201ENST00000377197 TMPOP42166 694 aaKnown RBP13.25□□□□□ -0.29
C9orf135-201ENST00000377197 EIF5P55010 431 aaKnown RBP13.25□□□□□ -0.29
C9orf135-201ENST00000377197 RIPK4P57078 832 aa13.25□□□□□ -0.29
C9orf135-201ENST00000377197 LMOD3Q0VAK6 560 aa13.25□□□□□ -0.29
C9orf135-201ENST00000377197 MRPL50Q8N5N7 158 aaKnown RBP13.25□□□□□ -0.29
C9orf135-201ENST00000377197 ZNF330Q9Y3S2 320 aaPredicted RBP13.25□□□□□ -0.29
C9orf135-201ENST00000377197 ANKRD31Q8N7Z5 1873 aa13.25□□□□□ -0.29
C9orf135-201ENST00000377197 PRAMEF22A3QJZ6 481 aa13.24□□□□□ -0.29
C9orf135-201ENST00000377197 IL6STP40189 918 aaPredicted RBP13.24□□□□□ -0.29
C9orf135-201ENST00000377197 DDR1Q08345 913 aa13.24□□□□□ -0.29
C9orf135-201ENST00000377197 NPM2Q86SE8 214 aaKnown RBP13.24□□□□□ -0.29
C9orf135-201ENST00000377197 RUNDC1Q96C34 613 aa13.24□□□□□ -0.29
C9orf135-201ENST00000377197 NPDC1Q9NQX5 325 aaPredicted RBP13.24□□□□□ -0.29
C9orf135-201ENST00000377197 SEPT9Q9UHD8 586 aaPredicted RBP13.24□□□□□ -0.29
C9orf135-201ENST00000377197 USP16Q9Y5T5 823 aa13.24□□□□□ -0.29
C9orf135-201ENST00000377197 CACNA1SQ13698 1873 aa13.24□□□□□ -0.29
C9orf135-201ENST00000377197 NUP98P52948 1817 aa13.24□□□□□ -0.29
C9orf135-201ENST00000377197 TESPA1A2RU30 521 aaPredicted RBP13.23□□□□□ -0.29
C9orf135-201ENST00000377197 POLRMTO00411 1230 aaKnown RBP13.23□□□□□ -0.29
C9orf135-201ENST00000377197 A1BGP04217 495 aa13.23□□□□□ -0.29
C9orf135-201ENST00000377197 CDCA7LQ96GN5 454 aa13.23□□□□□ -0.29
C9orf135-201ENST00000377197 MIS18AQ9NYP9 233 aa13.23□□□□□ -0.29
C9orf135-201ENST00000377197 WWC3Q9ULE0 1092 aa13.23□□□□□ -0.29
C9orf135-201ENST00000377197 ADAMTS8Q9UP79 889 aa13.23□□□□□ -0.29
C9orf135-201ENST00000377197 C3orf80F5H4A9 247 aa13.22□□□□□ -0.29
C9orf135-201ENST00000377197 TGFB2P61812 414 aa13.22□□□□□ -0.29
C9orf135-201ENST00000377197 NBPF3Q9H094 633 aa13.22□□□□□ -0.29
C9orf135-201ENST00000377197 RRP7AQ9Y3A4 280 aaKnown RBP13.22□□□□□ -0.29
C9orf135-201ENST00000377197 COL11A2P13942 1736 aaPredicted RBP13.22□□□□□ -0.29
C9orf135-201ENST00000377197 TM4SF1P30408 202 aa13.21□□□□□ -0.29
C9orf135-201ENST00000377197 PIP4K2AP48426 406 aaPredicted RBP13.21□□□□□ -0.29
C9orf135-201ENST00000377197 PRSS12P56730 875 aa13.21□□□□□ -0.29
C9orf135-201ENST00000377197 NFIXQ14938 502 aa13.21□□□□□ -0.29
C9orf135-201ENST00000377197 NEUROD2Q15784 382 aa13.21□□□□□ -0.29
C9orf135-201ENST00000377197 TSPYL4Q9UJ04 414 aa13.21□□□□□ -0.29
C9orf135-201ENST00000377197 APLP1P51693 650 aa13.2□□□□□ -0.3
C9orf135-201ENST00000377197 EIF4A1P60842 406 aaKnown RBP13.2□□□□□ -0.3
C9orf135-201ENST00000377197 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
C9orf135-201ENST00000377197 TBC1D2BQ9UPU7 963 aa13.2□□□□□ -0.3
C9orf135-201ENST00000377197 ANKRD36CQ5JPF3 1778 aa13.2□□□□□ -0.3
C9orf135-201ENST00000377197 ARFGEF2Q9Y6D5 1785 aa13.2□□□□□ -0.3
C9orf135-201ENST00000377197 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
C9orf135-201ENST00000377197 SMAPO00193 183 aa13.19□□□□□ -0.3
C9orf135-201ENST00000377197 ANP32CO43423 234 aa13.19□□□□□ -0.3
C9orf135-201ENST00000377197 A0A0G2JLW4 131 aa13.18□□□□□ -0.3
C9orf135-201ENST00000377197 GOLGA8CPA6NN73 597 aa13.18□□□□□ -0.3
C9orf135-201ENST00000377197 CAMTA2O94983 1202 aa13.18□□□□□ -0.3
C9orf135-201ENST00000377197 DPEP1P16444 411 aa13.18□□□□□ -0.3
C9orf135-201ENST00000377197 RBM26Q5T8P6 1007 aaKnown RBP13.18□□□□□ -0.3
C9orf135-201ENST00000377197 TBC1D9BQ66K14 1250 aa13.18□□□□□ -0.3
C9orf135-201ENST00000377197 BICDL1Q6ZP65 573 aa13.18□□□□□ -0.3
C9orf135-201ENST00000377197 WNT2BQ93097 391 aa13.18□□□□□ -0.3
C9orf135-201ENST00000377197 BABAM1Q9NWV8 329 aa13.18□□□□□ -0.3
C9orf135-201ENST00000377197 WDR90Q96KV7 1748 aa13.17□□□□□ -0.3
C9orf135-201ENST00000377197 NBPF26B4DH59 902 aa13.17□□□□□ -0.3
C9orf135-201ENST00000377197 SERPINB2P05120 415 aa13.17□□□□□ -0.3
C9orf135-201ENST00000377197 NBPF10Q6P3W6 841 aaKnown RBP13.17□□□□□ -0.3
C9orf135-201ENST00000377197 NBPF15Q8N660 670 aa13.17□□□□□ -0.3
C9orf135-201ENST00000377197 ZNF652Q9Y2D9 606 aa13.17□□□□□ -0.3
C9orf135-201ENST00000377197 SBF1O95248 1867 aa13.16□□□□□ -0.3
C9orf135-201ENST00000377197 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
C9orf135-201ENST00000377197 BCS1LQ9Y276 419 aa13.16□□□□□ -0.3
C9orf135-201ENST00000377197 ERBB4Q15303 1308 aa13.15□□□□□ -0.3
C9orf135-201ENST00000377197 CCDC88AQ3V6T2 1871 aa13.15□□□□□ -0.3
C9orf135-201ENST00000377197 TOMM70O94826 608 aa13.15□□□□□ -0.3
C9orf135-201ENST00000377197 PTPN5P54829 565 aa13.15□□□□□ -0.3
C9orf135-201ENST00000377197 CCDC184Q52MB2 194 aa13.15□□□□□ -0.3
C9orf135-201ENST00000377197 PACS2Q86VP3 889 aa13.15□□□□□ -0.3
C9orf135-201ENST00000377197 LAS1LQ9Y4W2 734 aaKnown RBP13.15□□□□□ -0.3
C9orf135-201ENST00000377197 APAF1O14727 1248 aa13.14□□□□□ -0.31
C9orf135-201ENST00000377197 KCNA3P22001 575 aa13.14□□□□□ -0.31
C9orf135-201ENST00000377197 CHRNA5P30532 468 aa13.14□□□□□ -0.31
C9orf135-201ENST00000377197 PTGDRQ13258 359 aa13.14□□□□□ -0.31
C9orf135-201ENST00000377197 CLEC4GQ6UXB4 293 aa13.14□□□□□ -0.31
C9orf135-201ENST00000377197 SETDB2Q96T68 719 aa13.14□□□□□ -0.31
C9orf135-201ENST00000377197 MRS2Q9HD23 443 aa13.14□□□□□ -0.31
C9orf135-201ENST00000377197 PIM2Q9P1W9 311 aa13.14□□□□□ -0.31
C9orf135-201ENST00000377197 TNRC6CQ9HCJ0 1690 aaKnown RBP13.14□□□□□ -0.31
C9orf135-201ENST00000377197 CHL1O00533 1208 aa13.13□□□□□ -0.31
C9orf135-201ENST00000377197 NPHP1O15259 732 aa13.13□□□□□ -0.31
C9orf135-201ENST00000377197 MYL6BP14649 208 aa13.13□□□□□ -0.31
C9orf135-201ENST00000377197 PRR5LQ6MZQ0 368 aa13.13□□□□□ -0.31
C9orf135-201ENST00000377197 THSD4Q6ZMP0 1018 aa13.13□□□□□ -0.31
C9orf135-201ENST00000377197 C16orf71Q8IYS4 520 aaPredicted RBP13.13□□□□□ -0.31
C9orf135-201ENST00000377197 NGEFQ8N5V2 710 aa13.13□□□□□ -0.31
C9orf135-201ENST00000377197 CNBD1Q8NA66 436 aa13.13□□□□□ -0.31
C9orf135-201ENST00000377197 ZFRQ96KR1 1074 aaKnown RBP13.13□□□□□ -0.31
C9orf135-201ENST00000377197 ST5P78524 1137 aa13.12□□□□□ -0.31
C9orf135-201ENST00000377197 KIF6Q6ZMV9 814 aa13.12□□□□□ -0.31
C9orf135-201ENST00000377197 HCSTQ9UBK5 93 aa13.12□□□□□ -0.31
C9orf135-201ENST00000377197 TIAM2Q8IVF5 1701 aa13.12□□□□□ -0.31
C9orf135-201ENST00000377197 FER1L6Q2WGJ9 1857 aa13.12□□□□□ -0.31
C9orf135-201ENST00000377197 MAP3K15Q6ZN16 1313 aa13.12□□□□□ -0.31
C9orf135-201ENST00000377197 EIF2S2P20042 333 aaKnown RBP13.11□□□□□ -0.31
C9orf135-201ENST00000377197 BCAMP50895 628 aa13.11□□□□□ -0.31
C9orf135-201ENST00000377197 CALD1Q05682 793 aaKnown RBP13.11□□□□□ -0.31
C9orf135-201ENST00000377197 DALRD3Q5D0E6 543 aaKnown RBP13.11□□□□□ -0.31
C9orf135-201ENST00000377197 LAPTM4BQ86VI4 370 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms