RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 PPP4CP60510 307 aa8.24□□□□□ -1.09
SSX3-202ENST00000376893 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.24□□□□□ -1.09
SSX3-202ENST00000376893 AK5Q9Y6K8 562 aa8.24□□□□□ -1.09
SSX3-202ENST00000376893 PLA2R1Q13018 1463 aa8.24□□□□□ -1.09
SSX3-202ENST00000376893 NOS1P29475 1434 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 HSD3B2P26439 372 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 TNNI2P48788 182 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 NBPF6Q5VWK0 638 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 PPP1R18Q6NYC8 613 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 NLGN1Q8N2Q7 840 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 KCNB2Q92953 911 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 SPACA7Q96KW9 195 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 NBPF4Q96M43 638 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 SLC4A9Q96Q91 983 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 SAP130Q9H0E3 1048 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 PIF1Q9H611 641 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 ZSWIM4Q9H7M6 989 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 WWC3Q9ULE0 1092 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 RPRD2Q5VT52 1461 aaKnown RBP8.23□□□□□ -1.09
SSX3-202ENST00000376893 SPHKAPQ2M3C7 1700 aa8.23□□□□□ -1.09
SSX3-202ENST00000376893 NUP155O75694 1391 aa8.22□□□□□ -1.09
SSX3-202ENST00000376893 PNMA6FA0A0J9YX94 578 aa8.22□□□□□ -1.09
SSX3-202ENST00000376893 AAMPQ13685 434 aa8.22□□□□□ -1.09
SSX3-202ENST00000376893 NFE2L2Q16236 605 aa8.22□□□□□ -1.09
SSX3-202ENST00000376893 RNF19AQ9NV58 838 aa8.22□□□□□ -1.09
SSX3-202ENST00000376893 CLTCL1P53675 1640 aa8.21□□□□□ -1.09
SSX3-202ENST00000376893 TRPM2O94759 1503 aa8.21□□□□□ -1.1
SSX3-202ENST00000376893 MARCH6O60337 910 aa8.21□□□□□ -1.1
SSX3-202ENST00000376893 STK10O94804 968 aaKnown RBP8.21□□□□□ -1.1
SSX3-202ENST00000376893 CLSTN1O94985 981 aa8.21□□□□□ -1.1
SSX3-202ENST00000376893 FGRP09769 529 aa8.21□□□□□ -1.1
SSX3-202ENST00000376893 GJA8P48165 433 aa8.21□□□□□ -1.1
SSX3-202ENST00000376893 SCNN1DP51172 638 aa8.21□□□□□ -1.1
SSX3-202ENST00000376893 ERVK-9P63128 1117 aa8.21□□□□□ -1.1
SSX3-202ENST00000376893 COX20Q5RI15 118 aa8.21□□□□□ -1.1
SSX3-202ENST00000376893 PTCRAQ6ISU1 281 aaPredicted RBP8.21□□□□□ -1.1
SSX3-202ENST00000376893 POTEAQ6S8J7 498 aa8.21□□□□□ -1.1
SSX3-202ENST00000376893 ZNF687Q8N1G0 1237 aa8.21□□□□□ -1.1
SSX3-202ENST00000376893 C2orf49Q9BVC5 232 aaPredicted RBP8.21□□□□□ -1.1
SSX3-202ENST00000376893 TMX1Q9H3N1 280 aa8.21□□□□□ -1.1
SSX3-202ENST00000376893 TSR3Q9UJK0 312 aaKnown RBP8.21□□□□□ -1.1
SSX3-202ENST00000376893 SOWAHBA6NEL2 793 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 ST18O60284 1047 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 NEFLP07196 543 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 CTSHP09668 335 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 MZF1P28698 734 aaPredicted RBP8.2□□□□□ -1.1
SSX3-202ENST00000376893 GDF10P55107 478 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 FOXK2Q01167 660 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 PTPROQ16827 1216 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 C4orf48Q5BLP8 95 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 NOL8Q76FK4 1167 aaKnown RBP8.2□□□□□ -1.1
SSX3-202ENST00000376893 HS2ST1Q7LGA3 356 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 MCF2L2Q86YR7 1114 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 ZNF511Q8NB15 262 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 ZCRB1Q8TBF4 217 aaKnown RBP8.2□□□□□ -1.1
SSX3-202ENST00000376893 PMFBP1Q8TBY8 1022 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 MICAL1Q8TDZ2 1067 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 NIF3L1Q9GZT8 377 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 DNAJC25Q9H1X3 360 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 TSPAN10Q9H1Z9 355 aaPredicted RBP8.2□□□□□ -1.1
SSX3-202ENST00000376893 SRA1Q9HD15 236 aaKnown RBP8.2□□□□□ -1.1
SSX3-202ENST00000376893 IQGAP1P46940 1657 aa8.2□□□□□ -1.1
SSX3-202ENST00000376893 GIPC1O14908 333 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 ZBTB24O43167 697 aaPredicted RBP8.19□□□□□ -1.1
SSX3-202ENST00000376893 INHAP05111 366 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 IBSPP21815 317 aaPredicted RBP8.19□□□□□ -1.1
SSX3-202ENST00000376893 BRD2P25440 801 aaKnown RBP8.19□□□□□ -1.1
SSX3-202ENST00000376893 EMP3P54852 163 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 RACK1P63244 317 aaKnown RBP8.19□□□□□ -1.1
SSX3-202ENST00000376893 IGBP1P78318 339 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 AGERQ15109 404 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 USP48Q86UV5 1035 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 TNS4Q8IZW8 715 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 ANKK1Q8NFD2 765 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 MKL1Q969V6 931 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 CFHR5Q9BXR6 569 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 PRDM9Q9NQV7 894 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 SPG7Q9UQ90 795 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 MAP4K5Q9Y4K4 846 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 MYO5BQ9ULV0 1848 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 RAB3GAP2Q9H2M9 1393 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 ARHGAP23Q9P227 1491 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 SLIT1O75093 1534 aa8.19□□□□□ -1.1
SSX3-202ENST00000376893 TMEM131LA2VDJ0 1609 aa8.18□□□□□ -1.1
SSX3-202ENST00000376893 KDM5AP29375 1690 aaKnown RBP8.18□□□□□ -1.1
SSX3-202ENST00000376893 A0A1W2PRU2 124 aa8.18□□□□□ -1.1
SSX3-202ENST00000376893 PPP1R12BO60237 982 aaPredicted RBP8.18□□□□□ -1.1
SSX3-202ENST00000376893 RAB11FIP3O75154 756 aa8.18□□□□□ -1.1
SSX3-202ENST00000376893 ADH1BP00325 375 aa8.18□□□□□ -1.1
SSX3-202ENST00000376893 CC2D2BQ6DHV5 1058 aa8.18□□□□□ -1.1
SSX3-202ENST00000376893 FOXJ1Q92949 421 aa8.18□□□□□ -1.1
SSX3-202ENST00000376893 GPATCH3Q96I76 525 aa8.18□□□□□ -1.1
SSX3-202ENST00000376893 CSRNP1Q96S65 589 aa8.18□□□□□ -1.1
SSX3-202ENST00000376893 HPS5Q9UPZ3 1129 aa8.18□□□□□ -1.1
SSX3-202ENST00000376893 CFAP65Q6ZU64 1925 aaKnown RBP8.18□□□□□ -1.1
SSX3-202ENST00000376893 SCAF11Q99590 1463 aaKnown RBP8.18□□□□□ -1.1
SSX3-202ENST00000376893 hCG_2014768A0A024R1R8 64 aa8.17□□□□□ -1.1
SSX3-202ENST00000376893 XRCC5P13010 732 aaKnown RBP8.17□□□□□ -1.1
SSX3-202ENST00000376893 ATF4P18848 351 aaPredicted RBP8.17□□□□□ -1.1
SSX3-202ENST00000376893 PSMA6P60900 246 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms