RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 GNPATO15228 680 aa18.08■□□□□ 0.49
CCHCR1-201ENST00000376266 LETM1O95202 739 aaPredicted RBP18.08■□□□□ 0.49
CCHCR1-201ENST00000376266 TTC22Q5TAA0 569 aa18.08■□□□□ 0.49
CCHCR1-201ENST00000376266 RC3H1Q5TC82 1133 aaKnown RBP18.08■□□□□ 0.49
CCHCR1-201ENST00000376266 IL6STP40189 918 aaPredicted RBP18.08■□□□□ 0.48
CCHCR1-201ENST00000376266 AMIGO3Q86WK7 504 aa18.08■□□□□ 0.48
CCHCR1-201ENST00000376266 C4BP0C0L5 1744 aa18.08■□□□□ 0.48
CCHCR1-201ENST00000376266 CACNA1FO60840 1977 aa18.07■□□□□ 0.48
CCHCR1-201ENST00000376266 TTLL7Q6ZT98 887 aa18.07■□□□□ 0.48
CCHCR1-201ENST00000376266 RGPD3A6NKT7 1758 aaPredicted RBP18.07■□□□□ 0.48
CCHCR1-201ENST00000376266 RGPD4Q7Z3J3 1758 aa18.07■□□□□ 0.48
CCHCR1-201ENST00000376266 F6X3S4 739 aa18.07■□□□□ 0.48
CCHCR1-201ENST00000376266 EIF5P55010 431 aaKnown RBP18.07■□□□□ 0.48
CCHCR1-201ENST00000376266 CASC1Q6TDU7 716 aa18.07■□□□□ 0.48
CCHCR1-201ENST00000376266 AK7Q96M32 723 aa18.07■□□□□ 0.48
CCHCR1-201ENST00000376266 PTPRCP08575 1304 aa18.06■□□□□ 0.48
CCHCR1-201ENST00000376266 PI4KAP2A4QPH2 592 aa18.05■□□□□ 0.48
CCHCR1-201ENST00000376266 C17orf53Q8N3J3 647 aaPredicted RBP18.05■□□□□ 0.48
CCHCR1-201ENST00000376266 PI4KAP1Q8N8J0 262 aa18.05■□□□□ 0.48
CCHCR1-201ENST00000376266 ARHGAP45Q92619 1136 aa18.05■□□□□ 0.48
CCHCR1-201ENST00000376266 RREB1Q92766 1687 aa18.05■□□□□ 0.48
CCHCR1-201ENST00000376266 RPS6KA4O75676 772 aa18.05■□□□□ 0.48
CCHCR1-201ENST00000376266 ZNF827Q17R98 1081 aa18.05■□□□□ 0.48
CCHCR1-201ENST00000376266 TTC12Q9H892 705 aaPredicted RBP18.05■□□□□ 0.48
CCHCR1-201ENST00000376266 TBC1D2BQ9UPU7 963 aa18.05■□□□□ 0.48
CCHCR1-201ENST00000376266 RTCBQ9Y3I0 505 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-201ENST00000376266 PHF14O94880 888 aa18.04■□□□□ 0.48
CCHCR1-201ENST00000376266 C16orf71Q8IYS4 520 aaPredicted RBP18.04■□□□□ 0.48
CCHCR1-201ENST00000376266 BCL2L12Q9HB09 334 aa18.04■□□□□ 0.48
CCHCR1-201ENST00000376266 SPDYE4A6NLX3 237 aa18.04■□□□□ 0.48
CCHCR1-201ENST00000376266 ANKRD13DQ6ZTN6 518 aa18.04■□□□□ 0.48
CCHCR1-201ENST00000376266 PDCL2Q8N4E4 241 aa18.04■□□□□ 0.48
CCHCR1-201ENST00000376266 API5Q9BZZ5 524 aaKnown RBP18.03■□□□□ 0.48
CCHCR1-201ENST00000376266 ZBTB3Q9H5J0 574 aa18.03■□□□□ 0.48
CCHCR1-201ENST00000376266 USP25Q9UHP3 1055 aa18.03■□□□□ 0.48
CCHCR1-201ENST00000376266 COL15A1P39059 1388 aa18.03■□□□□ 0.48
CCHCR1-201ENST00000376266 UVSSAQ2YD98 709 aa18.03■□□□□ 0.48
CCHCR1-201ENST00000376266 SLC4A10Q6U841 1118 aa18.03■□□□□ 0.48
CCHCR1-201ENST00000376266 MAP3K2Q9Y2U5 619 aa18.03■□□□□ 0.48
CCHCR1-201ENST00000376266 ADCY9O60503 1353 aa18.03■□□□□ 0.48
CCHCR1-201ENST00000376266 REC8O95072 547 aa18.02■□□□□ 0.48
CCHCR1-201ENST00000376266 DDX58O95786 925 aaKnown RBP18.02■□□□□ 0.48
CCHCR1-201ENST00000376266 KSR2Q6VAB6 950 aa18.02■□□□□ 0.48
CCHCR1-201ENST00000376266 RIC3Q7Z5B4 369 aa18.02■□□□□ 0.48
CCHCR1-201ENST00000376266 DZIP3Q86Y13 1208 aaKnown RBP18.02■□□□□ 0.48
CCHCR1-201ENST00000376266 FAM184AQ8NB25 1140 aa18.02■□□□□ 0.48
CCHCR1-201ENST00000376266 AKT1S1Q96B36 256 aa18.02■□□□□ 0.48
CCHCR1-201ENST00000376266 TFCP2L1Q9NZI6 479 aa18.02■□□□□ 0.48
CCHCR1-201ENST00000376266 SDSP20132 328 aa18.02■□□□□ 0.47
CCHCR1-201ENST00000376266 KIF6Q6ZMV9 814 aa18.02■□□□□ 0.47
CCHCR1-201ENST00000376266 BBXQ8WY36 941 aaPredicted RBP18.02■□□□□ 0.47
CCHCR1-201ENST00000376266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.01■□□□□ 0.47
CCHCR1-201ENST00000376266 ADCY5O95622 1261 aa18.01■□□□□ 0.47
CCHCR1-201ENST00000376266 BRD1O95696 1058 aa18.01■□□□□ 0.47
CCHCR1-201ENST00000376266 HMGB2P26583 209 aaKnown RBP18.01■□□□□ 0.47
CCHCR1-201ENST00000376266 PLBD2Q8NHP8 589 aa18.01■□□□□ 0.47
CCHCR1-201ENST00000376266 ARHGEF1Q92888 912 aaKnown RBP18.01■□□□□ 0.47
CCHCR1-201ENST00000376266 TMX3Q96JJ7 454 aa18.01■□□□□ 0.47
CCHCR1-201ENST00000376266 DCTPP1Q9H773 170 aa18.01■□□□□ 0.47
CCHCR1-201ENST00000376266 NEK4P51957 841 aa18.01■□□□□ 0.47
CCHCR1-201ENST00000376266 DNAAF4Q8WXU2 420 aa18.01■□□□□ 0.47
CCHCR1-201ENST00000376266 FOXD4L6Q3SYB3 417 aaPredicted RBP18■□□□□ 0.47
CCHCR1-201ENST00000376266 TRAPPC3LQ5T215 181 aa18■□□□□ 0.47
CCHCR1-201ENST00000376266 FOXD4L3Q6VB84 417 aaPredicted RBP18■□□□□ 0.47
CCHCR1-201ENST00000376266 SPTLC3Q9NUV7 552 aa18■□□□□ 0.47
CCHCR1-201ENST00000376266 ABCC4O15439 1325 aa17.99■□□□□ 0.47
CCHCR1-201ENST00000376266 MAP3K15Q6ZN16 1313 aa17.99■□□□□ 0.47
CCHCR1-201ENST00000376266 HLFQ16534 295 aa17.99■□□□□ 0.47
CCHCR1-201ENST00000376266 OTUD7AQ8TE49 926 aaPredicted RBP17.99■□□□□ 0.47
CCHCR1-201ENST00000376266 UBR3Q6ZT12 1888 aa17.99■□□□□ 0.47
CCHCR1-201ENST00000376266 CHAF1AQ13111 956 aaPredicted RBP17.99■□□□□ 0.47
CCHCR1-201ENST00000376266 A0A087WZG4 1122 aa17.98■□□□□ 0.47
CCHCR1-201ENST00000376266 GADD45BO75293 160 aaPredicted RBP17.98■□□□□ 0.47
CCHCR1-201ENST00000376266 DIAPH3Q9NSV4 1193 aa17.98■□□□□ 0.47
CCHCR1-201ENST00000376266 SRP68Q9UHB9 627 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-201ENST00000376266 NUP188Q5SRE5 1749 aa17.98■□□□□ 0.47
CCHCR1-201ENST00000376266 ERC2O15083 957 aa17.98■□□□□ 0.47
CCHCR1-201ENST00000376266 CAMTA2O94983 1202 aa17.98■□□□□ 0.47
CCHCR1-201ENST00000376266 RFC4P35249 363 aa17.98■□□□□ 0.47
CCHCR1-201ENST00000376266 SLC15A2Q16348 729 aa17.98■□□□□ 0.47
CCHCR1-201ENST00000376266 GDPD2Q9HCC8 539 aa17.98■□□□□ 0.47
CCHCR1-201ENST00000376266 U2AF2P26368 475 aaKnown RBP eCLIP17.97■□□□□ 0.47
CCHCR1-201ENST00000376266 MYD88Q99836 296 aa17.97■□□□□ 0.47
CCHCR1-201ENST00000376266 METTL22Q9BUU2 404 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-201ENST00000376266 STK32BQ9NY57 414 aa17.97■□□□□ 0.47
CCHCR1-201ENST00000376266 APBB1O00213 710 aa17.97■□□□□ 0.47
CCHCR1-201ENST00000376266 IGSF3O75054 1194 aa17.97■□□□□ 0.47
CCHCR1-201ENST00000376266 ATP5J2-PTCD1G3V325 749 aa17.96■□□□□ 0.47
CCHCR1-201ENST00000376266 ADRA2BP18089 450 aa17.96■□□□□ 0.47
CCHCR1-201ENST00000376266 USPL1Q5W0Q7 1092 aa17.96■□□□□ 0.47
CCHCR1-201ENST00000376266 NARFQ9UHQ1 456 aa17.96■□□□□ 0.47
CCHCR1-201ENST00000376266 ERVV-1B6SEH8 477 aa17.96■□□□□ 0.47
CCHCR1-201ENST00000376266 ZPR1O75312 459 aa17.96■□□□□ 0.47
CCHCR1-201ENST00000376266 CWF19L2Q2TBE0 894 aaKnown RBP17.96■□□□□ 0.47
CCHCR1-201ENST00000376266 BEND3Q5T5X7 828 aa17.96■□□□□ 0.47
CCHCR1-201ENST00000376266 ARFGEF2Q9Y6D5 1785 aa17.95■□□□□ 0.46
CCHCR1-201ENST00000376266 RIOK3O14730 519 aaKnown RBP17.95■□□□□ 0.46
CCHCR1-201ENST00000376266 MCM2P49736 904 aa17.95■□□□□ 0.46
CCHCR1-201ENST00000376266 PLCB2Q00722 1185 aa17.95■□□□□ 0.46
CCHCR1-201ENST00000376266 GIGYF2Q6Y7W6 1299 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms