RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 CRNKL1Q9BZJ0 848 aaKnown RBP15.78■□□□□ 0.12
C9orf47-203ENST00000375851 BABAM1Q9NWV8 329 aa15.78■□□□□ 0.12
C9orf47-203ENST00000375851 TOP1P11387 765 aaKnown RBP15.77■□□□□ 0.12
C9orf47-203ENST00000375851 BICC1Q9H694 974 aaKnown RBP15.77■□□□□ 0.12
C9orf47-203ENST00000375851 SLC4A8Q2Y0W8 1093 aa15.77■□□□□ 0.12
C9orf47-203ENST00000375851 KAT14Q9H8E8 782 aa15.77■□□□□ 0.12
C9orf47-203ENST00000375851 TFCP2Q12800 502 aa15.77■□□□□ 0.11
C9orf47-203ENST00000375851 PTPN14Q15678 1187 aa15.77■□□□□ 0.11
C9orf47-203ENST00000375851 Q6ZUG5 572 aa15.77■□□□□ 0.11
C9orf47-203ENST00000375851 STX8Q9UNK0 236 aa15.77■□□□□ 0.11
C9orf47-203ENST00000375851 LGR6Q9HBX8 967 aa15.77■□□□□ 0.11
C9orf47-203ENST00000375851 VAT1LQ9HCJ6 419 aa15.77■□□□□ 0.11
C9orf47-203ENST00000375851 UBAP1LF5GYI3 381 aa15.76■□□□□ 0.11
C9orf47-203ENST00000375851 HCLS1P14317 486 aaPredicted RBP15.76■□□□□ 0.11
C9orf47-203ENST00000375851 WWC2Q6AWC2 1192 aa15.76■□□□□ 0.11
C9orf47-203ENST00000375851 SLC4A4Q9Y6R1 1079 aa15.76■□□□□ 0.11
C9orf47-203ENST00000375851 CFAP65Q6ZU64 1925 aaKnown RBP15.76■□□□□ 0.11
C9orf47-203ENST00000375851 RDXP35241 583 aaKnown RBP15.76■□□□□ 0.11
C9orf47-203ENST00000375851 GIMAP6Q6P9H5 292 aa15.76■□□□□ 0.11
C9orf47-203ENST00000375851 HELBQ8NG08 1087 aaPredicted RBP15.76■□□□□ 0.11
C9orf47-203ENST00000375851 UTP14AQ9BVJ6 771 aaKnown RBP15.76■□□□□ 0.11
C9orf47-203ENST00000375851 KRT23Q9C075 422 aa15.76■□□□□ 0.11
C9orf47-203ENST00000375851 TMEM266Q2M3C6 531 aa15.76■□□□□ 0.11
C9orf47-203ENST00000375851 ZSCAN23Q3MJ62 389 aa15.76■□□□□ 0.11
C9orf47-203ENST00000375851 PLEKHG3A1L390 1219 aa15.75■□□□□ 0.11
C9orf47-203ENST00000375851 IRS4O14654 1257 aaPredicted RBP15.75■□□□□ 0.11
C9orf47-203ENST00000375851 KIAA1328Q86T90 577 aa15.75■□□□□ 0.11
C9orf47-203ENST00000375851 OTUD7AQ8TE49 926 aaPredicted RBP15.75■□□□□ 0.11
C9orf47-203ENST00000375851 CNPY2Q9Y2B0 182 aa15.75■□□□□ 0.11
C9orf47-203ENST00000375851 HOXB7P09629 217 aa15.75■□□□□ 0.11
C9orf47-203ENST00000375851 RBM25P49756 843 aaKnown RBP15.75■□□□□ 0.11
C9orf47-203ENST00000375851 STX1AQ16623 288 aa15.75■□□□□ 0.11
C9orf47-203ENST00000375851 AXDND1Q5T1B0 1012 aaPredicted RBP15.75■□□□□ 0.11
C9orf47-203ENST00000375851 ESR2Q92731 530 aa15.75■□□□□ 0.11
C9orf47-203ENST00000375851 USP26Q9BXU7 913 aa15.75■□□□□ 0.11
C9orf47-203ENST00000375851 SPATA31E1Q6ZUB1 1445 aa15.75■□□□□ 0.11
C9orf47-203ENST00000375851 MBD5Q9P267 1494 aa15.75■□□□□ 0.11
C9orf47-203ENST00000375851 SKIDA1Q1XH10 827 aa15.75■□□□□ 0.11
C9orf47-203ENST00000375851 CCDC102BQ68D86 513 aa15.75■□□□□ 0.11
C9orf47-203ENST00000375851 KIF2AO00139 706 aaPredicted RBP15.75■□□□□ 0.11
C9orf47-203ENST00000375851 ADCY5O95622 1261 aa15.75■□□□□ 0.11
C9orf47-203ENST00000375851 TMTC2Q8N394 836 aa15.75■□□□□ 0.11
C9orf47-203ENST00000375851 ZMYM4Q5VZL5 1548 aa15.75■□□□□ 0.11
C9orf47-203ENST00000375851 AK2P54819 239 aa15.74■□□□□ 0.11
C9orf47-203ENST00000375851 CCDC12Q8WUD4 166 aaPredicted RBP15.74■□□□□ 0.11
C9orf47-203ENST00000375851 UBXN4Q92575 508 aa15.74■□□□□ 0.11
C9orf47-203ENST00000375851 ALG1Q9BT22 464 aa15.74■□□□□ 0.11
C9orf47-203ENST00000375851 SEPT11Q9NVA2 429 aaKnown RBP15.74■□□□□ 0.11
C9orf47-203ENST00000375851 PCDH11XQ9BZA7 1347 aa15.74■□□□□ 0.11
C9orf47-203ENST00000375851 PCDH11YQ9BZA8 1340 aa15.74■□□□□ 0.11
C9orf47-203ENST00000375851 ZNF397Q8NF99 534 aaPredicted RBP15.74■□□□□ 0.11
C9orf47-203ENST00000375851 CNNM2Q9H8M5 875 aa15.74■□□□□ 0.11
C9orf47-203ENST00000375851 PATL2C9JE40 543 aaKnown RBP15.74■□□□□ 0.11
C9orf47-203ENST00000375851 ERLIN1O75477 346 aa15.74■□□□□ 0.11
C9orf47-203ENST00000375851 UBA7P41226 1012 aa15.74■□□□□ 0.11
C9orf47-203ENST00000375851 CREB3L3Q68CJ9 461 aa15.74■□□□□ 0.11
C9orf47-203ENST00000375851 NAA16Q6N069 864 aaPredicted RBP15.74■□□□□ 0.11
C9orf47-203ENST00000375851 USP48Q86UV5 1035 aa15.74■□□□□ 0.11
C9orf47-203ENST00000375851 C8orf37Q96NL8 207 aa15.74■□□□□ 0.11
C9orf47-203ENST00000375851 TCP11L1Q9NUJ3 509 aa15.74■□□□□ 0.11
C9orf47-203ENST00000375851 RNF113AO15541 343 aaKnown RBP15.73■□□□□ 0.11
C9orf47-203ENST00000375851 ZSCAN12O43309 604 aa15.73■□□□□ 0.11
C9orf47-203ENST00000375851 CAVIN2O95810 425 aa15.73■□□□□ 0.11
C9orf47-203ENST00000375851 ISM2Q6H9L7 571 aa15.73■□□□□ 0.11
C9orf47-203ENST00000375851 F13A1P00488 732 aa15.73■□□□□ 0.11
C9orf47-203ENST00000375851 FKBP15Q5T1M5 1219 aa15.73■□□□□ 0.11
C9orf47-203ENST00000375851 ZGPATQ8N5A5 531 aaKnown RBP15.73■□□□□ 0.11
C9orf47-203ENST00000375851 INSRP06213 1382 aa15.73■□□□□ 0.11
C9orf47-203ENST00000375851 TMEM2Q9UHN6 1383 aa15.73■□□□□ 0.11
C9orf47-203ENST00000375851 ZNF622Q969S3 477 aaKnown RBP eCLIP15.73■□□□□ 0.11
C9orf47-203ENST00000375851 PRC1O43663 620 aa15.73■□□□□ 0.11
C9orf47-203ENST00000375851 PPP1R12BO60237 982 aaPredicted RBP15.73■□□□□ 0.11
C9orf47-203ENST00000375851 DNM1Q05193 864 aaKnown RBP15.73■□□□□ 0.11
C9orf47-203ENST00000375851 LRSAM1Q6UWE0 723 aa15.73■□□□□ 0.11
C9orf47-203ENST00000375851 ST5P78524 1137 aa15.72■□□□□ 0.11
C9orf47-203ENST00000375851 TNIP1Q15025 636 aa15.72■□□□□ 0.11
C9orf47-203ENST00000375851 RTN1Q16799 776 aa15.72■□□□□ 0.11
C9orf47-203ENST00000375851 KIF18AQ8NI77 898 aa15.72■□□□□ 0.11
C9orf47-203ENST00000375851 BTG4Q9NY30 223 aa15.72■□□□□ 0.11
C9orf47-203ENST00000375851 RNF123Q5XPI4 1314 aa15.72■□□□□ 0.11
C9orf47-203ENST00000375851 IDEP14735 1019 aa15.72■□□□□ 0.11
C9orf47-203ENST00000375851 LTKP29376 864 aa15.72■□□□□ 0.11
C9orf47-203ENST00000375851 CPLX3Q8WVH0 158 aa15.72■□□□□ 0.11
C9orf47-203ENST00000375851 CUL5Q93034 780 aa15.72■□□□□ 0.11
C9orf47-203ENST00000375851 HLA-DOAP06340 250 aa15.71■□□□□ 0.11
C9orf47-203ENST00000375851 GSTO1P78417 241 aa15.71■□□□□ 0.11
C9orf47-203ENST00000375851 FAM89AQ96GI7 184 aa15.71■□□□□ 0.11
C9orf47-203ENST00000375851 KDM2BQ8NHM5 1336 aa15.71■□□□□ 0.11
C9orf47-203ENST00000375851 TIMM10P62072 90 aa15.71■□□□□ 0.11
C9orf47-203ENST00000375851 UVSSAQ2YD98 709 aa15.71■□□□□ 0.11
C9orf47-203ENST00000375851 TPTE2Q6XPS3 522 aa15.71■□□□□ 0.11
C9orf47-203ENST00000375851 CHST3Q7LGC8 479 aa15.71■□□□□ 0.11
C9orf47-203ENST00000375851 METTL22Q9BUU2 404 aaPredicted RBP15.71■□□□□ 0.11
C9orf47-203ENST00000375851 UBA5Q9GZZ9 404 aa15.71■□□□□ 0.11
C9orf47-203ENST00000375851 USP19O94966 1318 aa15.71■□□□□ 0.11
C9orf47-203ENST00000375851 ERLIN2O94905 339 aa15.71■□□□□ 0.11
C9orf47-203ENST00000375851 SYKP43405 635 aa15.71■□□□□ 0.11
C9orf47-203ENST00000375851 IFIT1BQ5T764 474 aaKnown RBP15.71■□□□□ 0.11
C9orf47-203ENST00000375851 TSG101Q99816 390 aa15.71■□□□□ 0.11
C9orf47-203ENST00000375851 BLMP54132 1417 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms