RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 GOLGA8AA7E2F4 631 aa19.47■□□□□ 0.71
VARS-215ENST00000375663 IGSF3O75054 1194 aa19.47■□□□□ 0.71
VARS-215ENST00000375663 IARSP41252 1262 aaKnown RBP19.47■□□□□ 0.71
VARS-215ENST00000375663 EPS15P42566 896 aa19.47■□□□□ 0.71
VARS-215ENST00000375663 CCDC102BQ68D86 513 aa19.47■□□□□ 0.71
VARS-215ENST00000375663 PLXNC1O60486 1568 aa19.47■□□□□ 0.71
VARS-215ENST00000375663 SYKP43405 635 aa19.47■□□□□ 0.71
VARS-215ENST00000375663 SLC12A7Q9Y666 1083 aa19.47■□□□□ 0.71
VARS-215ENST00000375663 GNG11P61952 73 aa19.46■□□□□ 0.71
VARS-215ENST00000375663 SLC39A6Q13433 755 aa19.46■□□□□ 0.71
VARS-215ENST00000375663 AKAP4Q5JQC9 854 aa19.46■□□□□ 0.71
VARS-215ENST00000375663 DEF6Q9H4E7 631 aa19.46■□□□□ 0.71
VARS-215ENST00000375663 DNAI1Q9UI46 699 aa19.46■□□□□ 0.71
VARS-215ENST00000375663 CCDC196A0A1B0GTZ2 297 aa19.46■□□□□ 0.71
VARS-215ENST00000375663 IFIT3O14879 490 aaKnown RBP19.46■□□□□ 0.71
VARS-215ENST00000375663 UBASH3AP57075 661 aa19.46■□□□□ 0.71
VARS-215ENST00000375663 NCOA7Q8NI08 942 aa19.46■□□□□ 0.71
VARS-215ENST00000375663 ANKRD24Q8TF21 1146 aa19.46■□□□□ 0.71
VARS-215ENST00000375663 KIAA0232Q92628 1395 aa19.46■□□□□ 0.71
VARS-215ENST00000375663 JAKMIP3Q5VZ66 844 aa19.46■□□□□ 0.71
VARS-215ENST00000375663 SIRT2Q8IXJ6 389 aa19.46■□□□□ 0.71
VARS-215ENST00000375663 TRERF1Q96PN7 1200 aa19.46■□□□□ 0.71
VARS-215ENST00000375663 SLU7O95391 586 aaKnown RBP19.45■□□□□ 0.7
VARS-215ENST00000375663 CDR1P51861 262 aa19.45■□□□□ 0.7
VARS-215ENST00000375663 CCDC144CPQ8IYA2 1237 aa19.45■□□□□ 0.7
VARS-215ENST00000375663 CDK5RAP3Q96JB5 506 aa19.45■□□□□ 0.7
VARS-215ENST00000375663 ABCF2Q9UG63 623 aa19.45■□□□□ 0.7
VARS-215ENST00000375663 GTF2F1P35269 517 aaKnown RBP eCLIP19.45■□□□□ 0.7
VARS-215ENST00000375663 GBP3Q9H0R5 595 aa19.45■□□□□ 0.7
VARS-215ENST00000375663 TNRQ92752 1358 aa19.45■□□□□ 0.7
VARS-215ENST00000375663 RIOK3O14730 519 aaKnown RBP19.45■□□□□ 0.7
VARS-215ENST00000375663 SNRPA1P09661 255 aaKnown RBP19.45■□□□□ 0.7
VARS-215ENST00000375663 NBPF7P0C2Y1 421 aaPredicted RBP19.45■□□□□ 0.7
VARS-215ENST00000375663 LMOD1P29536 600 aaPredicted RBP19.45■□□□□ 0.7
VARS-215ENST00000375663 LMBR1LQ6UX01 489 aa19.45■□□□□ 0.7
VARS-215ENST00000375663 RAI14Q9P0K7 980 aa19.44■□□□□ 0.7
VARS-215ENST00000375663 CWC25Q9NXE8 425 aaPredicted RBP19.44■□□□□ 0.7
VARS-215ENST00000375663 POGZQ7Z3K3 1410 aa19.44■□□□□ 0.7
VARS-215ENST00000375663 EIF5P55010 431 aaKnown RBP19.44■□□□□ 0.7
VARS-215ENST00000375663 MINDY4BA8MYZ0 360 aa19.44■□□□□ 0.7
VARS-215ENST00000375663 METAP2P50579 478 aaKnown RBP eCLIP19.44■□□□□ 0.75e-7■■■■□ 21.1
VARS-215ENST00000375663 CCDC181Q5TID7 509 aa19.44■□□□□ 0.7
VARS-215ENST00000375663 FAM193AP78312 1265 aa19.43■□□□□ 0.7
VARS-215ENST00000375663 SSRP1Q08945 709 aaKnown RBP19.43■□□□□ 0.7
VARS-215ENST00000375663 IFNL2Q8IZJ0 200 aa19.43■□□□□ 0.7
VARS-215ENST00000375663 TRPM2O94759 1503 aa19.43■□□□□ 0.7
VARS-215ENST00000375663 PTPDC1A2A3K4 754 aa19.43■□□□□ 0.7
VARS-215ENST00000375663 GOLGA6L9A6NEM1 432 aa19.43■□□□□ 0.7
VARS-215ENST00000375663 APOBRQ0VD83 1088 aa19.43■□□□□ 0.7
VARS-215ENST00000375663 MAPK8IP2Q13387 824 aaPredicted RBP19.43■□□□□ 0.7
VARS-215ENST00000375663 KIAA1328Q86T90 577 aa19.43■□□□□ 0.7
VARS-215ENST00000375663 SMAP1Q8IYB5 467 aaPredicted RBP19.43■□□□□ 0.7
VARS-215ENST00000375663 TSC1Q92574 1164 aa19.43■□□□□ 0.7
VARS-215ENST00000375663 FAM227BQ96M60 508 aa19.43■□□□□ 0.7
VARS-215ENST00000375663 GTPBP4Q9BZE4 634 aaKnown RBP19.43■□□□□ 0.7
VARS-215ENST00000375663 CHST3Q7LGC8 479 aa19.42■□□□□ 0.7
VARS-215ENST00000375663 ZSWIM4Q9H7M6 989 aa19.42■□□□□ 0.7
VARS-215ENST00000375663 PODXL2Q9NZ53 605 aa19.42■□□□□ 0.7
VARS-215ENST00000375663 MARCKSP29966 332 aaPredicted RBP19.42■□□□□ 0.7
VARS-215ENST00000375663 HSP90AA4PQ58FG1 418 aa19.42■□□□□ 0.7
VARS-215ENST00000375663 DHX32Q7L7V1 743 aaKnown RBP19.42■□□□□ 0.7
VARS-215ENST00000375663 LRRC59Q96AG4 307 aaKnown RBP19.42■□□□□ 0.7
VARS-215ENST00000375663 SLC27A2O14975 620 aa19.42■□□□□ 0.7
VARS-215ENST00000375663 TRPM1Q7Z4N2 1603 aa19.42■□□□□ 0.7
VARS-215ENST00000375663 SPTLC2O15270 562 aa19.42■□□□□ 0.7
VARS-215ENST00000375663 RPS6KB1P23443 525 aa19.42■□□□□ 0.7
VARS-215ENST00000375663 BICC1Q9H694 974 aaKnown RBP19.42■□□□□ 0.7
VARS-215ENST00000375663 IBTKQ9P2D0 1353 aaPredicted RBP19.41■□□□□ 0.7
VARS-215ENST00000375663 UGGT1Q9NYU2 1555 aa19.41■□□□□ 0.7
VARS-215ENST00000375663 STARD3NLO95772 234 aa19.41■□□□□ 0.7
VARS-215ENST00000375663 MAP3K12Q12852 859 aa19.41■□□□□ 0.7
VARS-215ENST00000375663 TMEM67Q5HYA8 995 aa19.41■□□□□ 0.7
VARS-215ENST00000375663 FEZ1Q99689 392 aa19.41■□□□□ 0.7
VARS-215ENST00000375663 PHF23Q9BUL5 403 aaPredicted RBP19.41■□□□□ 0.7
VARS-215ENST00000375663 USP44Q9H0E7 712 aa19.41■□□□□ 0.7
VARS-215ENST00000375663 CBX8Q9HC52 389 aa19.41■□□□□ 0.7
VARS-215ENST00000375663 LRRIQ1Q96JM4 1722 aa19.41■□□□□ 0.7
VARS-215ENST00000375663 HOXC9P31274 260 aa19.41■□□□□ 0.7
VARS-215ENST00000375663 CCDC148Q8NFR7 591 aa19.41■□□□□ 0.7
VARS-215ENST00000375663 LDHAL6AQ6ZMR3 332 aa19.41■□□□□ 0.7
VARS-215ENST00000375663 TRIM34Q9BYJ4 488 aa19.4■□□□□ 0.7
VARS-215ENST00000375663 TSPYL1Q9H0U9 437 aa19.4■□□□□ 0.7
VARS-215ENST00000375663 ZNF397Q8NF99 534 aaPredicted RBP19.4■□□□□ 0.7
VARS-215ENST00000375663 CRACR2AQ9BSW2 395 aa19.4■□□□□ 0.7
VARS-215ENST00000375663 ALG1Q9BT22 464 aa19.4■□□□□ 0.7
VARS-215ENST00000375663 CCDC12Q8WUD4 166 aaPredicted RBP19.4■□□□□ 0.7
VARS-215ENST00000375663 IFNKQ9P0W0 207 aa19.4■□□□□ 0.7
VARS-215ENST00000375663 MYOM2P54296 1465 aa19.4■□□□□ 0.7
VARS-215ENST00000375663 LEO1Q8WVC0 666 aaPredicted RBP19.39■□□□□ 0.7
VARS-215ENST00000375663 SLC26A6Q9BXS9 759 aa19.39■□□□□ 0.7
VARS-215ENST00000375663 CLSTN2Q9H4D0 955 aa19.39■□□□□ 0.69
VARS-215ENST00000375663 PAG1Q9NWQ8 432 aa19.39■□□□□ 0.69
VARS-215ENST00000375663 CDC37L1Q7L3B6 337 aa19.39■□□□□ 0.69
VARS-215ENST00000375663 BABAM1Q9NWV8 329 aa19.39■□□□□ 0.69
VARS-215ENST00000375663 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.39■□□□□ 0.69
VARS-215ENST00000375663 SSH3Q8TE77 659 aa19.39■□□□□ 0.69
VARS-215ENST00000375663 TANGO6Q9C0B7 1094 aa19.39■□□□□ 0.69
VARS-215ENST00000375663 LUC7LQ9NQ29 371 aaKnown RBP19.39■□□□□ 0.69
VARS-215ENST00000375663 ZFYP08048 801 aaPredicted RBP19.38■□□□□ 0.69
VARS-215ENST00000375663 ZNF75DP51815 510 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms