RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 ASAP1Q9ULH1 1129 aa9.84□□□□□ -0.83
UBR4-202ENST00000375224 CCDC171Q6TFL3 1326 aa9.84□□□□□ -0.83
UBR4-202ENST00000375224 BCL9O00512 1426 aa9.84□□□□□ -0.83
UBR4-202ENST00000375224 DNAJC10Q8IXB1 793 aa9.84□□□□□ -0.83
UBR4-202ENST00000375224 FAM13BQ9NYF5 915 aa9.84□□□□□ -0.83
UBR4-202ENST00000375224 TLR7Q9NYK1 1049 aaKnown RBP9.84□□□□□ -0.83
UBR4-202ENST00000375224 KCNJ4P48050 445 aa9.84□□□□□ -0.83
UBR4-202ENST00000375224 SAMD1Q6SPF0 538 aaPredicted RBP9.84□□□□□ -0.83
UBR4-202ENST00000375224 DBNLQ9UJU6 430 aaKnown RBP9.84□□□□□ -0.83
UBR4-202ENST00000375224 COL16A1Q07092 1604 aaPredicted RBP9.83□□□□□ -0.84
UBR4-202ENST00000375224 PCCAP05165 728 aaPredicted RBP9.83□□□□□ -0.84
UBR4-202ENST00000375224 PSMA5P28066 241 aa9.83□□□□□ -0.84
UBR4-202ENST00000375224 NMIQ13287 307 aaPredicted RBP9.83□□□□□ -0.84
UBR4-202ENST00000375224 ZGPATQ8N5A5 531 aaKnown RBP9.83□□□□□ -0.84
UBR4-202ENST00000375224 PLA2G12BQ9BX93 195 aa9.83□□□□□ -0.84
UBR4-202ENST00000375224 UPF3BQ9BZI7 483 aaKnown RBP9.83□□□□□ -0.84
UBR4-202ENST00000375224 WNK3Q9BYP7 1800 aa9.83□□□□□ -0.84
UBR4-202ENST00000375224 GOLGA6L3A6NEY3 463 aa9.83□□□□□ -0.84
UBR4-202ENST00000375224 EYA2O00167 538 aa9.83□□□□□ -0.84
UBR4-202ENST00000375224 MAP4K1Q92918 833 aa9.83□□□□□ -0.84
UBR4-202ENST00000375224 ARID3AQ99856 593 aa9.83□□□□□ -0.84
UBR4-202ENST00000375224 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.83□□□□□ -0.84
UBR4-202ENST00000375224 MAP3K15Q6ZN16 1313 aa9.83□□□□□ -0.84
UBR4-202ENST00000375224 CCDC57Q2TAC2 916 aa9.83□□□□□ -0.84
UBR4-202ENST00000375224 ZSCAN31Q96LW9 406 aaPredicted RBP9.83□□□□□ -0.84
UBR4-202ENST00000375224 HAUS7Q99871 368 aa9.83□□□□□ -0.84
UBR4-202ENST00000375224 LIMCH1Q9UPQ0 1083 aa9.83□□□□□ -0.84
UBR4-202ENST00000375224 CYP46A1Q9Y6A2 500 aa9.83□□□□□ -0.84
UBR4-202ENST00000375224 NECTIN1Q15223 517 aa9.82□□□□□ -0.84
UBR4-202ENST00000375224 VPS53Q5VIR6 699 aa9.82□□□□□ -0.84
UBR4-202ENST00000375224 GIGYF2Q6Y7W6 1299 aaKnown RBP9.82□□□□□ -0.84
UBR4-202ENST00000375224 TTC14Q96N46 770 aa9.82□□□□□ -0.84
UBR4-202ENST00000375224 HMG20BQ9P0W2 317 aa9.82□□□□□ -0.84
UBR4-202ENST00000375224 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.82□□□□□ -0.84
UBR4-202ENST00000375224 PTH1RQ03431 593 aa9.82□□□□□ -0.84
UBR4-202ENST00000375224 PRPF40BQ6NWY9 871 aaKnown RBP9.82□□□□□ -0.84
UBR4-202ENST00000375224 ZBTB38Q8NAP3 1195 aaPredicted RBP9.82□□□□□ -0.84
UBR4-202ENST00000375224 ZNF330Q9Y3S2 320 aaPredicted RBP9.82□□□□□ -0.84
UBR4-202ENST00000375224 RBM8AQ9Y5S9 174 aaKnown RBP9.82□□□□□ -0.84
UBR4-202ENST00000375224 CDHR2Q9BYE9 1310 aa9.82□□□□□ -0.84
UBR4-202ENST00000375224 CASTP20810 708 aaKnown RBP9.81□□□□□ -0.84
UBR4-202ENST00000375224 PPP4R3BQ5MIZ7 849 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 ATG9AQ7Z3C6 839 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 MTERF4Q7Z6M4 381 aaKnown RBP9.81□□□□□ -0.84
UBR4-202ENST00000375224 RASEFQ8IZ41 740 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 DBNDD2Q9BQY9 259 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 ZSWIM6Q9HCJ5 1215 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 AKAP2Q9Y2D5 859 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 MED23Q9ULK4 1368 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 FAM227BQ96M60 508 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 PRDM10Q9NQV6 1147 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 SH2B1Q9NRF2 756 aaPredicted RBP9.81□□□□□ -0.84
UBR4-202ENST00000375224 CEP126Q9P2H0 1117 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 PHLPP1O60346 1717 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 LTBP4Q8N2S1 1624 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 CYP19A1P11511 503 aaPredicted RBP9.81□□□□□ -0.84
UBR4-202ENST00000375224 KLHL40Q2TBA0 621 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 LRRFIP1Q32MZ4 808 aaKnown RBP9.81□□□□□ -0.84
UBR4-202ENST00000375224 CREB3L3Q68CJ9 461 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.81□□□□□ -0.84
UBR4-202ENST00000375224 JAKMIP1Q96N16 626 aaKnown RBP9.81□□□□□ -0.84
UBR4-202ENST00000375224 NEUROD6Q96NK8 337 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 PDRG1Q9NUG6 133 aa9.81□□□□□ -0.84
UBR4-202ENST00000375224 ERVV-1B6SEH8 477 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 IL6STP40189 918 aaPredicted RBP9.8□□□□□ -0.84
UBR4-202ENST00000375224 IRX3P78415 501 aaPredicted RBP9.8□□□□□ -0.84
UBR4-202ENST00000375224 KRT32Q14532 448 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 ANKRD1Q15327 319 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 MCTP1Q6DN14 999 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 ZNF830Q96NB3 372 aaPredicted RBP9.8□□□□□ -0.84
UBR4-202ENST00000375224 GZF1Q9H116 711 aaPredicted RBP9.8□□□□□ -0.84
UBR4-202ENST00000375224 KAT6BQ8WYB5 2073 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 JCADQ9P266 1359 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 SPATA31A1Q5TZJ5 1347 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 A0A0D9SFI3 127 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 BRD1O95696 1058 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 AK2P54819 239 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 DDB1Q16531 1140 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 NOL8Q76FK4 1167 aaKnown RBP9.8□□□□□ -0.84
UBR4-202ENST00000375224 RUFY3Q7L099 469 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 KBTBD3Q8NAB2 608 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 DDX49Q9Y6V7 483 aaKnown RBP9.8□□□□□ -0.84
UBR4-202ENST00000375224 WDR33Q9C0J8 1336 aaKnown RBP9.8□□□□□ -0.84
UBR4-202ENST00000375224 FSD2A1L4K1 749 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 ESPNB1AK53 854 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 CSF1RP07333 972 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 TSGA10IPQ3SY00 556 aa9.8□□□□□ -0.84
UBR4-202ENST00000375224 SYTL4Q96C24 671 aaPredicted RBP9.8□□□□□ -0.84
UBR4-202ENST00000375224 DNAJC2Q99543 621 aaKnown RBP9.8□□□□□ -0.84
UBR4-202ENST00000375224 SPEF2Q9C093 1822 aa9.79□□□□□ -0.84
UBR4-202ENST00000375224 IFIT5Q13325 482 aaKnown RBP9.79□□□□□ -0.84
UBR4-202ENST00000375224 ALDH8A1Q9H2A2 487 aaPredicted RBP9.79□□□□□ -0.84
UBR4-202ENST00000375224 U3KPZ7 1027 aaPredicted RBP9.79□□□□□ -0.84
UBR4-202ENST00000375224 PALLDQ8WX93 1383 aa9.79□□□□□ -0.84
UBR4-202ENST00000375224 ZNF609O15014 1411 aa9.79□□□□□ -0.84
UBR4-202ENST00000375224 SLC27A2O14975 620 aa9.79□□□□□ -0.84
UBR4-202ENST00000375224 MRE11P49959 708 aa9.79□□□□□ -0.84
UBR4-202ENST00000375224 MCMDC2Q4G0Z9 681 aa9.79□□□□□ -0.84
UBR4-202ENST00000375224 HELLSQ9NRZ9 838 aa9.79□□□□□ -0.84
UBR4-202ENST00000375224 ZDHHC9Q9Y397 364 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms