RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 TMEM266Q2M3C6 531 aa22.62■■□□□ 1.21
COL15A1-201ENST00000375001 USHBP1Q8N6Y0 703 aa22.62■■□□□ 1.21
COL15A1-201ENST00000375001 RHOXF2Q9BQY4 288 aa22.62■■□□□ 1.21
COL15A1-201ENST00000375001 PTGS1P23219 599 aa22.62■■□□□ 1.21
COL15A1-201ENST00000375001 NLRP5P59047 1200 aa22.62■■□□□ 1.21
COL15A1-201ENST00000375001 HS1BP3Q53T59 392 aa22.62■■□□□ 1.21
COL15A1-201ENST00000375001 APBB1IPQ7Z5R6 666 aaPredicted RBP22.62■■□□□ 1.21
COL15A1-201ENST00000375001 PROSER2Q86WR7 435 aaPredicted RBP22.62■■□□□ 1.21
COL15A1-201ENST00000375001 SYT10Q6XYQ8 523 aa22.61■■□□□ 1.21
COL15A1-201ENST00000375001 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.61■■□□□ 1.21
COL15A1-201ENST00000375001 SMC6Q96SB8 1091 aa22.61■■□□□ 1.21
COL15A1-201ENST00000375001 RBM5P52756 815 aaKnown RBP eCLIP22.61■■□□□ 1.21
COL15A1-201ENST00000375001 PIP4K2BP78356 416 aa22.61■■□□□ 1.21
COL15A1-201ENST00000375001 CCDC129Q6ZRS4 1044 aa22.61■■□□□ 1.21
COL15A1-201ENST00000375001 TRIM47Q96LD4 638 aa22.61■■□□□ 1.21
COL15A1-201ENST00000375001 ZNF213O14771 459 aa22.61■■□□□ 1.21
COL15A1-201ENST00000375001 PRC1O43663 620 aa22.61■■□□□ 1.21
COL15A1-201ENST00000375001 IFI16Q16666 785 aaKnown RBP22.61■■□□□ 1.21
COL15A1-201ENST00000375001 IQCGQ9H095 443 aaKnown RBP22.61■■□□□ 1.21
COL15A1-201ENST00000375001 USP16Q9Y5T5 823 aa22.61■■□□□ 1.21
COL15A1-201ENST00000375001 TUBB4AP04350 444 aa22.6■■□□□ 1.21
COL15A1-201ENST00000375001 IFIT1P09914 478 aaKnown RBP22.6■■□□□ 1.21
COL15A1-201ENST00000375001 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.6■■□□□ 1.21
COL15A1-201ENST00000375001 KANK3Q6NY19 840 aa22.6■■□□□ 1.21
COL15A1-201ENST00000375001 CAPZA3Q96KX2 299 aa22.6■■□□□ 1.21
COL15A1-201ENST00000375001 SYKP43405 635 aa22.6■■□□□ 1.21
COL15A1-201ENST00000375001 DACT1Q9NYF0 836 aa22.6■■□□□ 1.21
COL15A1-201ENST00000375001 ORC3Q9UBD5 711 aaPredicted RBP22.6■■□□□ 1.21
COL15A1-201ENST00000375001 DDX46Q7L014 1031 aaKnown RBP22.6■■□□□ 1.21
COL15A1-201ENST00000375001 COMMD10Q9Y6G5 202 aa22.6■■□□□ 1.21
COL15A1-201ENST00000375001 CETN1Q12798 172 aa22.59■■□□□ 1.21
COL15A1-201ENST00000375001 MYD88Q99836 296 aa22.59■■□□□ 1.21
COL15A1-201ENST00000375001 IFIT3O14879 490 aaKnown RBP22.59■■□□□ 1.21
COL15A1-201ENST00000375001 RLBP1P12271 317 aa22.59■■□□□ 1.21
COL15A1-201ENST00000375001 FBLN1P23142 703 aa22.59■■□□□ 1.21
COL15A1-201ENST00000375001 TOM1L2Q6ZVM7 507 aa22.59■■□□□ 1.21
COL15A1-201ENST00000375001 FAM76AQ8TAV0 307 aa22.59■■□□□ 1.21
COL15A1-201ENST00000375001 IL16Q14005 1332 aa22.58■■□□□ 1.21
COL15A1-201ENST00000375001 PARD3Q8TEW0 1356 aa22.58■■□□□ 1.21
COL15A1-201ENST00000375001 KARSQ15046 597 aaKnown RBP22.58■■□□□ 1.21
COL15A1-201ENST00000375001 CCDC144CPQ8IYA2 1237 aa22.58■■□□□ 1.21
COL15A1-201ENST00000375001 SNX21Q969T3 373 aa22.58■■□□□ 1.21
COL15A1-201ENST00000375001 GOLIM4O00461 696 aa22.58■■□□□ 1.21
COL15A1-201ENST00000375001 ECHDC1Q9NTX5 307 aa22.58■■□□□ 1.21
COL15A1-201ENST00000375001 RANBP6O60518 1105 aaKnown RBP22.58■■□□□ 1.2
COL15A1-201ENST00000375001 TTC14Q96N46 770 aa22.58■■□□□ 1.2
COL15A1-201ENST00000375001 METTL24Q5JXM2 366 aa22.58■■□□□ 1.2
COL15A1-201ENST00000375001 RAB11FIP4Q86YS3 637 aa22.58■■□□□ 1.2
COL15A1-201ENST00000375001 RRAGDQ9NQL2 400 aaPredicted RBP22.58■■□□□ 1.2
COL15A1-201ENST00000375001 IARSP41252 1262 aaKnown RBP22.57■■□□□ 1.2
COL15A1-201ENST00000375001 AMPD3Q01432 767 aa22.57■■□□□ 1.2
COL15A1-201ENST00000375001 NECAB1Q8N987 351 aa22.57■■□□□ 1.2
COL15A1-201ENST00000375001 TACC1O75410 805 aa22.57■■□□□ 1.2
COL15A1-201ENST00000375001 STIM2Q9P246 746 aa22.57■■□□□ 1.2
COL15A1-201ENST00000375001 SMIM23A6NLE4 172 aa22.57■■□□□ 1.2
COL15A1-201ENST00000375001 TCP11L1Q9NUJ3 509 aa22.57■■□□□ 1.2
COL15A1-201ENST00000375001 MEIS3Q99687 375 aa22.57■■□□□ 1.2
COL15A1-201ENST00000375001 ZSCAN16Q9H4T2 348 aaPredicted RBP22.57■■□□□ 1.2
COL15A1-201ENST00000375001 RRAGBQ5VZM2 374 aa22.56■■□□□ 1.2
COL15A1-201ENST00000375001 EVI5LQ96CN4 794 aa22.56■■□□□ 1.2
COL15A1-201ENST00000375001 CCDC77Q9BR77 488 aa22.56■■□□□ 1.2
COL15A1-201ENST00000375001 C16orf71Q8IYS4 520 aaPredicted RBP22.56■■□□□ 1.2
COL15A1-201ENST00000375001 ARFGAP2Q8N6H7 521 aa22.56■■□□□ 1.2
COL15A1-201ENST00000375001 TSNARE1Q96NA8 513 aa22.56■■□□□ 1.2
COL15A1-201ENST00000375001 PSMD1Q99460 953 aa22.56■■□□□ 1.2
COL15A1-201ENST00000375001 SELENOOQ9BVL4 669 aa22.56■■□□□ 1.2
COL15A1-201ENST00000375001 MKNK2Q9HBH9 465 aa22.56■■□□□ 1.2
COL15A1-201ENST00000375001 LZTFL1Q9NQ48 299 aa22.56■■□□□ 1.2
COL15A1-201ENST00000375001 ACTN2P35609 894 aa22.56■■□□□ 1.2
COL15A1-201ENST00000375001 UBA7P41226 1012 aa22.56■■□□□ 1.2
COL15A1-201ENST00000375001 PPP1R42Q7Z4L9 355 aa22.56■■□□□ 1.2
COL15A1-201ENST00000375001 CALML4Q96GE6 196 aa22.56■■□□□ 1.2
COL15A1-201ENST00000375001 CTAGE1Q96RT6 745 aa22.56■■□□□ 1.2
COL15A1-201ENST00000375001 STMN4Q9H169 189 aaPredicted RBP22.56■■□□□ 1.2
COL15A1-201ENST00000375001 CLNS1AP54105 237 aaKnown RBP22.56■■□□□ 1.2
COL15A1-201ENST00000375001 LMOD1P29536 600 aaPredicted RBP22.55■■□□□ 1.2
COL15A1-201ENST00000375001 FAM160A1Q05DH4 1040 aa22.55■■□□□ 1.2
COL15A1-201ENST00000375001 THEMISQ8N1K5 641 aaPredicted RBP22.55■■□□□ 1.2
COL15A1-201ENST00000375001 MIPOL1Q8TD10 442 aa22.55■■□□□ 1.2
COL15A1-201ENST00000375001 TLDC2A0PJX2 215 aa22.55■■□□□ 1.2
COL15A1-201ENST00000375001 ZC3H6P61129 1189 aaKnown RBP22.55■■□□□ 1.2
COL15A1-201ENST00000375001 TNIP1Q15025 636 aa22.55■■□□□ 1.2
COL15A1-201ENST00000375001 HDXQ7Z353 690 aa22.55■■□□□ 1.2
COL15A1-201ENST00000375001 SAMD15Q9P1V8 674 aa22.55■■□□□ 1.2
COL15A1-201ENST00000375001 AFMP43652 599 aa22.54■■□□□ 1.2
COL15A1-201ENST00000375001 IFT81Q8WYA0 676 aa22.54■■□□□ 1.2
COL15A1-201ENST00000375001 DDX12PQ92771 950 aa22.54■■□□□ 1.2
COL15A1-201ENST00000375001 LACTBP83111 547 aaPredicted RBP22.54■■□□□ 1.2
COL15A1-201ENST00000375001 GRIPAP1Q4V328 841 aa22.54■■□□□ 1.2
COL15A1-201ENST00000375001 IQCA1Q86XH1 822 aa22.54■■□□□ 1.2
COL15A1-201ENST00000375001 RASAL2Q9UJF2 1139 aa22.54■■□□□ 1.2
COL15A1-201ENST00000375001 PPFIBP2Q8ND30 876 aa22.54■■□□□ 1.2
COL15A1-201ENST00000375001 SPAG5Q96R06 1193 aa22.54■■□□□ 1.2
COL15A1-201ENST00000375001 MPRIPQ6WCQ1 1025 aa22.54■■□□□ 1.2
COL15A1-201ENST00000375001 ZFYP08048 801 aaPredicted RBP22.54■■□□□ 1.2
COL15A1-201ENST00000375001 TYRO3Q06418 890 aa22.54■■□□□ 1.2
COL15A1-201ENST00000375001 ZNF569Q5MCW4 686 aa22.54■■□□□ 1.2
COL15A1-201ENST00000375001 ARHGAP45Q92619 1136 aa22.54■■□□□ 1.2
COL15A1-201ENST00000375001 NOS1P29475 1434 aa22.53■■□□□ 1.2
COL15A1-201ENST00000375001 NSD2O96028 1365 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms