RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 CABLES1Q8TDN4 633 aa21.32■■□□□ 1
PHF1-201ENST00000374512 FSD1Q9BTV5 496 aa21.32■■□□□ 1
PHF1-201ENST00000374512 FAM13BQ9NYF5 915 aa21.32■■□□□ 1
PHF1-201ENST00000374512 MEGF6O75095 1541 aa21.32■■□□□ 1
PHF1-201ENST00000374512 CSB-PGBD3P0DP91 1061 aa21.32■■□□□ 1
PHF1-201ENST00000374512 HSPA2P54652 639 aa21.32■■□□□ 1
PHF1-201ENST00000374512 NEURL1BA8MQ27 555 aa21.31■■□□□ 1
PHF1-201ENST00000374512 GOLGA6L6A8MZA4 724 aa21.31■■□□□ 1
PHF1-201ENST00000374512 MYL6BP14649 208 aa21.31■■□□□ 1
PHF1-201ENST00000374512 NECAB1Q8N987 351 aa21.31■■□□□ 1
PHF1-201ENST00000374512 CCDC8Q9H0W5 538 aaPredicted RBP21.31■■□□□ 1
PHF1-201ENST00000374512 CPDO75976 1380 aa21.31■■□□□ 1
PHF1-201ENST00000374512 DNTTIP2Q5QJE6 756 aaKnown RBP21.31■■□□□ 1
PHF1-201ENST00000374512 USPL1Q5W0Q7 1092 aa21.31■■□□□ 1
PHF1-201ENST00000374512 XAGE3Q8WTP9 111 aa21.31■■□□□ 1
PHF1-201ENST00000374512 METTL22Q9BUU2 404 aaPredicted RBP21.31■■□□□ 1
PHF1-201ENST00000374512 RBM10P98175 930 aaKnown RBP21.3■■□□□ 1
PHF1-201ENST00000374512 MAP3K11Q16584 847 aa21.3■■□□□ 1
PHF1-201ENST00000374512 A0A0D9SFI3 127 aa21.29■■□□□ 1
PHF1-201ENST00000374512 GCKRQ14397 625 aa21.29■■□□□ 1
PHF1-201ENST00000374512 COPS6Q7L5N1 327 aa21.29■■□□□ 1
PHF1-201ENST00000374512 TTC6Q86TZ1 520 aa21.29■■□□□ 1
PHF1-201ENST00000374512 FAM200AQ8TCP9 573 aa21.29■■□□□ 1
PHF1-201ENST00000374512 GTF2F1P35269 517 aaKnown RBP eCLIP21.29■■□□□ 11e-7■□□□□ 11.3
PHF1-201ENST00000374512 ZNF496Q96IT1 587 aaPredicted RBP21.29■■□□□ 1
PHF1-201ENST00000374512 NUP62CLQ9H1M0 184 aa21.29■■□□□ 1
PHF1-201ENST00000374512 COL15A1P39059 1388 aa21.29■■□□□ 1
PHF1-201ENST00000374512 PKD1L3Q7Z443 1732 aa21.28■■□□□ 1
PHF1-201ENST00000374512 SNRPA1P09661 255 aaKnown RBP21.28■■□□□ 1
PHF1-201ENST00000374512 CHRNA2Q15822 529 aa21.28■■□□□ 1
PHF1-201ENST00000374512 TTC5Q8N0Z6 440 aa21.28■■□□□ 1
PHF1-201ENST00000374512 DCAF5Q96JK2 942 aa21.28■■□□□ 1
PHF1-201ENST00000374512 MYD88Q99836 296 aa21.28■■□□□ 1
PHF1-201ENST00000374512 BOLA2Q9H3K6 86 aa21.28■■□□□ 1
PHF1-201ENST00000374512 COPRSQ9NQ92 184 aa21.28■■□□□ 1
PHF1-201ENST00000374512 ATP5JP18859 108 aa21.28■■□□□ 1
PHF1-201ENST00000374512 VSIG10Q8N0Z9 540 aa21.28■■□□□ 1
PHF1-201ENST00000374512 TTC12Q9H892 705 aaPredicted RBP21.28■■□□□ 1
PHF1-201ENST00000374512 DDX19AQ9NUU7 478 aaKnown RBP21.28■■□□□ 1
PHF1-201ENST00000374512 TOB2Q14106 344 aaPredicted RBP21.27■■□□□ 1
PHF1-201ENST00000374512 ANKRD13DQ6ZTN6 518 aa21.27■■□□□ 1
PHF1-201ENST00000374512 CDC37L1Q7L3B6 337 aa21.27■■□□□ 1
PHF1-201ENST00000374512 SIL1Q9H173 461 aa21.27■■□□□ 1
PHF1-201ENST00000374512 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.27■■□□□ 1
PHF1-201ENST00000374512 TAF5LO75529 589 aa21.27■□□□□ 0.99
PHF1-201ENST00000374512 TICAM2Q86XR7 235 aa21.27■□□□□ 0.99
PHF1-201ENST00000374512 TLR7Q9NYK1 1049 aaKnown RBP21.27■□□□□ 0.99
PHF1-201ENST00000374512 ZNF830Q96NB3 372 aaPredicted RBP21.26■□□□□ 0.99
PHF1-201ENST00000374512 GOLGA6L4A6NEF3 574 aa21.25■□□□□ 0.99
PHF1-201ENST00000374512 RBM43Q6ZSC3 357 aaKnown RBP21.25■□□□□ 0.99
PHF1-201ENST00000374512 AFDNP55196 1824 aaKnown RBP21.25■□□□□ 0.99
PHF1-201ENST00000374512 BRINP3Q76B58 766 aa21.25■□□□□ 0.99
PHF1-201ENST00000374512 LRP10Q7Z4F1 713 aa21.25■□□□□ 0.99
PHF1-201ENST00000374512 KIAA1524Q8TCG1 905 aa21.25■□□□□ 0.99
PHF1-201ENST00000374512 FMNL2Q96PY5 1086 aa21.25■□□□□ 0.99
PHF1-201ENST00000374512 USP16Q9Y5T5 823 aa21.25■□□□□ 0.99
PHF1-201ENST00000374512 CAVIN2O95810 425 aa21.24■□□□□ 0.99
PHF1-201ENST00000374512 SPATA32Q96LK8 384 aa21.24■□□□□ 0.99
PHF1-201ENST00000374512 U3KPZ7 1027 aaPredicted RBP21.24■□□□□ 0.99
PHF1-201ENST00000374512 CYP27B1O15528 508 aa21.24■□□□□ 0.99
PHF1-201ENST00000374512 TYRO3Q06418 890 aa21.24■□□□□ 0.99
PHF1-201ENST00000374512 TPRNQ4KMQ1 711 aa21.24■□□□□ 0.99
PHF1-201ENST00000374512 EPHA10Q5JZY3 1008 aa21.23■□□□□ 0.99
PHF1-201ENST00000374512 KLHDC4Q8TBB5 520 aa21.23■□□□□ 0.99
PHF1-201ENST00000374512 DDX54Q8TDD1 881 aaKnown RBP21.23■□□□□ 0.99
PHF1-201ENST00000374512 TNMDQ9H2S6 317 aa21.23■□□□□ 0.99
PHF1-201ENST00000374512 ZNF589Q86UQ0 364 aaPredicted RBP21.23■□□□□ 0.99
PHF1-201ENST00000374512 LEO1Q8WVC0 666 aaPredicted RBP21.23■□□□□ 0.99
PHF1-201ENST00000374512 GTF3C6Q969F1 213 aa21.23■□□□□ 0.99
PHF1-201ENST00000374512 ZSCAN16Q9H4T2 348 aaPredicted RBP21.23■□□□□ 0.99
PHF1-201ENST00000374512 MRVI1Q9Y6F6 885 aa21.23■□□□□ 0.99
PHF1-201ENST00000374512 ARFGEF2Q9Y6D5 1785 aa21.22■□□□□ 0.99
PHF1-201ENST00000374512 AP5Z1O43299 807 aa21.22■□□□□ 0.99
PHF1-201ENST00000374512 LIG1P18858 919 aa21.22■□□□□ 0.99
PHF1-201ENST00000374512 PLCB2Q00722 1185 aa21.22■□□□□ 0.99
PHF1-201ENST00000374512 RABL6Q3YEC7 729 aaPredicted RBP21.22■□□□□ 0.99
PHF1-201ENST00000374512 FERMT3Q86UX7 667 aa21.22■□□□□ 0.99
PHF1-201ENST00000374512 NEK1Q96PY6 1258 aa21.22■□□□□ 0.99
PHF1-201ENST00000374512 STRCQ7RTU9 1775 aa21.21■□□□□ 0.99
PHF1-201ENST00000374512 TNNI3KQ59H18 835 aa21.21■□□□□ 0.99
PHF1-201ENST00000374512 CLSTN2Q9H4D0 955 aa21.21■□□□□ 0.99
PHF1-201ENST00000374512 FPGT-TNNI3KV9GXZ4 949 aa21.21■□□□□ 0.99
PHF1-201ENST00000374512 CABP4P57796 275 aa21.21■□□□□ 0.99
PHF1-201ENST00000374512 LLPHQ9BRT6 129 aaKnown RBP21.21■□□□□ 0.99
PHF1-201ENST00000374512 LAMB4A4D0S4 1761 aa21.21■□□□□ 0.99
PHF1-201ENST00000374512 HMGB1P09429 215 aaKnown RBP21.2■□□□□ 0.98
PHF1-201ENST00000374512 RFX5P48382 616 aaPredicted RBP21.2■□□□□ 0.98
PHF1-201ENST00000374512 DACT1Q9NYF0 836 aa21.2■□□□□ 0.98
PHF1-201ENST00000374512 PARP4Q9UKK3 1724 aaKnown RBP21.2■□□□□ 0.98
PHF1-201ENST00000374512 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.2■□□□□ 0.98
PHF1-201ENST00000374512 DBNLQ9UJU6 430 aaKnown RBP21.2■□□□□ 0.98
PHF1-201ENST00000374512 CFAP45Q9UL16 551 aa21.2■□□□□ 0.98
PHF1-201ENST00000374512 PTPN12Q05209 780 aaKnown RBP21.19■□□□□ 0.98
PHF1-201ENST00000374512 CHAF1AQ13111 956 aaPredicted RBP21.19■□□□□ 0.98
PHF1-201ENST00000374512 MPNDQ8N594 471 aa21.19■□□□□ 0.98
PHF1-201ENST00000374512 PIP4K2AP48426 406 aaPredicted RBP21.19■□□□□ 0.98
PHF1-201ENST00000374512 MCMDC2Q4G0Z9 681 aa21.19■□□□□ 0.98
PHF1-201ENST00000374512 UBE3BQ7Z3V4 1068 aa21.19■□□□□ 0.98
PHF1-201ENST00000374512 HAUS7Q99871 368 aa21.19■□□□□ 0.98
PHF1-201ENST00000374512 KCNF1Q9H3M0 494 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms