RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 RAB3IL1Q8TBN0 382 aa16.62■□□□□ 0.25
SNX30-201ENST00000374232 EXOC1Q9NV70 894 aa16.62■□□□□ 0.25
SNX30-201ENST00000374232 LZTFL1Q9NQ48 299 aa16.62■□□□□ 0.25
SNX30-201ENST00000374232 CCDC196A0A1B0GTZ2 297 aa16.62■□□□□ 0.25
SNX30-201ENST00000374232 GIGYF2Q6Y7W6 1299 aaKnown RBP16.62■□□□□ 0.25
SNX30-201ENST00000374232 ERCC5P28715 1186 aaPredicted RBP16.61■□□□□ 0.25
SNX30-201ENST00000374232 LDHAL6AQ6ZMR3 332 aa16.61■□□□□ 0.25
SNX30-201ENST00000374232 CCDC50Q8IVM0 306 aa16.61■□□□□ 0.25
SNX30-201ENST00000374232 THEMISQ8N1K5 641 aaPredicted RBP16.61■□□□□ 0.25
SNX30-201ENST00000374232 NGLY1Q96IV0 654 aa16.61■□□□□ 0.25
SNX30-201ENST00000374232 DHX58Q96C10 678 aa16.61■□□□□ 0.25
SNX30-201ENST00000374232 CIZ1Q9ULV3 898 aaPredicted RBP16.61■□□□□ 0.25
SNX30-201ENST00000374232 TNNQ9UQP3 1299 aa16.61■□□□□ 0.25
SNX30-201ENST00000374232 UBA7P41226 1012 aa16.61■□□□□ 0.25
SNX30-201ENST00000374232 CCDC186Q7Z3E2 898 aa16.61■□□□□ 0.25
SNX30-201ENST00000374232 DNAAF4Q8WXU2 420 aa16.61■□□□□ 0.25
SNX30-201ENST00000374232 NEK1Q96PY6 1258 aa16.61■□□□□ 0.25
SNX30-201ENST00000374232 TCP11L1Q9NUJ3 509 aa16.61■□□□□ 0.25
SNX30-201ENST00000374232 KLF18A0A0U1RQI7 1052 aa16.61■□□□□ 0.25
SNX30-201ENST00000374232 MFSD6Q6ZSS7 791 aa16.61■□□□□ 0.25
SNX30-201ENST00000374232 ZKSCAN3Q9BRR0 538 aa16.61■□□□□ 0.25
SNX30-201ENST00000374232 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
SNX30-201ENST00000374232 SH3BP5O60239 455 aa16.6■□□□□ 0.25
SNX30-201ENST00000374232 DNM1Q05193 864 aaKnown RBP16.6■□□□□ 0.25
SNX30-201ENST00000374232 GTF2A1P52655 376 aaPredicted RBP16.6■□□□□ 0.25
SNX30-201ENST00000374232 ACTN2P35609 894 aa16.6■□□□□ 0.25
SNX30-201ENST00000374232 PPP1R42Q7Z4L9 355 aa16.6■□□□□ 0.25
SNX30-201ENST00000374232 VPS18Q9P253 973 aa16.6■□□□□ 0.25
SNX30-201ENST00000374232 GAPVD1Q14C86 1478 aa16.6■□□□□ 0.25
SNX30-201ENST00000374232 FCHSD2O94868 740 aa16.6■□□□□ 0.25
SNX30-201ENST00000374232 CCDC174Q6PII3 467 aa16.6■□□□□ 0.25
SNX30-201ENST00000374232 BRF1Q92994 677 aa16.6■□□□□ 0.25
SNX30-201ENST00000374232 EHMT1Q9H9B1 1298 aa16.6■□□□□ 0.25
SNX30-201ENST00000374232 KIF21BO75037 1637 aa16.6■□□□□ 0.25
SNX30-201ENST00000374232 LMOD1P29536 600 aaPredicted RBP16.6■□□□□ 0.25
SNX30-201ENST00000374232 STAT6P42226 847 aa16.6■□□□□ 0.25
SNX30-201ENST00000374232 SPATA24Q86W54 205 aa16.6■□□□□ 0.25
SNX30-201ENST00000374232 CEP112Q8N8E3 955 aa16.6■□□□□ 0.25
SNX30-201ENST00000374232 CALCOCO1Q9P1Z2 691 aa16.6■□□□□ 0.25
SNX30-201ENST00000374232 SYKP43405 635 aa16.59■□□□□ 0.25
SNX30-201ENST00000374232 NAA25Q14CX7 972 aa16.59■□□□□ 0.25
SNX30-201ENST00000374232 MICALCLQ6ZW33 695 aa16.59■□□□□ 0.25
SNX30-201ENST00000374232 PA2G4Q9UQ80 394 aaKnown RBP16.59■□□□□ 0.25
SNX30-201ENST00000374232 TLDC2A0PJX2 215 aa16.59■□□□□ 0.25
SNX30-201ENST00000374232 SLC39A6Q13433 755 aa16.59■□□□□ 0.25
SNX30-201ENST00000374232 KIAA0753Q2KHM9 967 aa16.59■□□□□ 0.25
SNX30-201ENST00000374232 LRSAM1Q6UWE0 723 aa16.59■□□□□ 0.25
SNX30-201ENST00000374232 Q6ZUG5 572 aa16.59■□□□□ 0.25
SNX30-201ENST00000374232 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
SNX30-201ENST00000374232 PI4KAP2A4QPH2 592 aa16.59■□□□□ 0.25
SNX30-201ENST00000374232 PI4KAP1Q8N8J0 262 aa16.59■□□□□ 0.25
SNX30-201ENST00000374232 AKR1B10O60218 316 aa16.58■□□□□ 0.25
SNX30-201ENST00000374232 ANKLE2Q86XL3 938 aa16.58■□□□□ 0.25
SNX30-201ENST00000374232 PPP1R9BQ96SB3 815 aa16.58■□□□□ 0.25
SNX30-201ENST00000374232 UAP1Q16222 522 aaPredicted RBP16.58■□□□□ 0.24
SNX30-201ENST00000374232 GTF3C6Q969F1 213 aa16.58■□□□□ 0.24
SNX30-201ENST00000374232 MIGA1Q8NAN2 632 aa16.58■□□□□ 0.24
SNX30-201ENST00000374232 TMX3Q96JJ7 454 aa16.58■□□□□ 0.24
SNX30-201ENST00000374232 FERMT1Q9BQL6 677 aa16.58■□□□□ 0.24
SNX30-201ENST00000374232 HELBQ8NG08 1087 aaPredicted RBP16.57■□□□□ 0.24
SNX30-201ENST00000374232 SKILP12757 684 aa16.57■□□□□ 0.24
SNX30-201ENST00000374232 LONRF3Q496Y0 759 aa16.57■□□□□ 0.24
SNX30-201ENST00000374232 KCNK9Q9NPC2 374 aa16.57■□□□□ 0.24
SNX30-201ENST00000374232 GUCA1BQ9UMX6 200 aa16.57■□□□□ 0.24
SNX30-201ENST00000374232 NDC80O14777 642 aa16.57■□□□□ 0.24
SNX30-201ENST00000374232 ALG1Q9BT22 464 aa16.57■□□□□ 0.24
SNX30-201ENST00000374232 UTP14AQ9BVJ6 771 aaKnown RBP16.57■□□□□ 0.24
SNX30-201ENST00000374232 NAA15Q9BXJ9 866 aaKnown RBP16.57■□□□□ 0.24
SNX30-201ENST00000374232 TSPY3P0CV98 308 aa16.57■□□□□ 0.24
SNX30-201ENST00000374232 TSPY8P0CW00 308 aa16.57■□□□□ 0.24
SNX30-201ENST00000374232 MCM3P25205 808 aa16.57■□□□□ 0.24
SNX30-201ENST00000374232 CEBPAP49715 358 aaPredicted RBP16.56■□□□□ 0.24
SNX30-201ENST00000374232 PLCB3Q01970 1234 aa16.56■□□□□ 0.24
SNX30-201ENST00000374232 NAIPQ13075 1403 aa16.56■□□□□ 0.24
SNX30-201ENST00000374232 SH2B1Q9NRF2 756 aaPredicted RBP16.56■□□□□ 0.24
SNX30-201ENST00000374232 CUX1P39880 1505 aa16.56■□□□□ 0.24
SNX30-201ENST00000374232 MCM7P33993 719 aa16.56■□□□□ 0.24
SNX30-201ENST00000374232 SLC4A4Q9Y6R1 1079 aa16.56■□□□□ 0.24
SNX30-201ENST00000374232 CPA1P15085 419 aa16.56■□□□□ 0.24
SNX30-201ENST00000374232 PPP2R5CQ13362 524 aa16.56■□□□□ 0.24
SNX30-201ENST00000374232 IFIT1BQ5T764 474 aaKnown RBP16.56■□□□□ 0.24
SNX30-201ENST00000374232 SIRT1Q96EB6 747 aa16.56■□□□□ 0.24
SNX30-201ENST00000374232 TTF1Q15361 905 aaPredicted RBP16.55■□□□□ 0.24
SNX30-201ENST00000374232 RIMBP2O15034 1052 aa16.55■□□□□ 0.24
SNX30-201ENST00000374232 KIF4AO95239 1232 aa16.55■□□□□ 0.24
SNX30-201ENST00000374232 EVI5LQ96CN4 794 aa16.55■□□□□ 0.24
SNX30-201ENST00000374232 HARSP12081 509 aaKnown RBP16.55■□□□□ 0.24
SNX30-201ENST00000374232 CCDC102BQ68D86 513 aa16.55■□□□□ 0.24
SNX30-201ENST00000374232 C10orf67Q8IYJ2 551 aa16.55■□□□□ 0.24
SNX30-201ENST00000374232 IQCGQ9H095 443 aaKnown RBP16.55■□□□□ 0.24
SNX30-201ENST00000374232 CABP5Q9NP86 173 aa16.55■□□□□ 0.24
SNX30-201ENST00000374232 SYT1P21579 422 aa16.55■□□□□ 0.24
SNX30-201ENST00000374232 RFC4P35249 363 aa16.55■□□□□ 0.24
SNX30-201ENST00000374232 C17orf53Q8N3J3 647 aaPredicted RBP16.55■□□□□ 0.24
SNX30-201ENST00000374232 TBC1D5Q92609 795 aa16.55■□□□□ 0.24
SNX30-201ENST00000374232 CYP7A1P22680 504 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 PRIM1P49642 420 aaKnown RBP16.54■□□□□ 0.24
SNX30-201ENST00000374232 DACT1Q9NYF0 836 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 MAPK8IP1Q9UQF2 711 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 AMPD3Q01432 767 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms