RNA–Protein interactions for RNA: ENST00000374218.6

PTPN20-201, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN20, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-201ENST00000374218 SSH3Q8TE77 659 aa11.36□□□□□ -0.59
PTPN20-201ENST00000374218 ANKRD36CQ5JPF3 1778 aa11.35□□□□□ -0.59
PTPN20-201ENST00000374218 GCC1Q96CN9 775 aa11.35□□□□□ -0.59
PTPN20-201ENST00000374218 ATF5Q9Y2D1 282 aaPredicted RBP11.35□□□□□ -0.59
PTPN20-201ENST00000374218 B4GALNT3Q6L9W6 998 aa11.35□□□□□ -0.59
PTPN20-201ENST00000374218 DDX46Q7L014 1031 aaKnown RBP11.35□□□□□ -0.59
PTPN20-201ENST00000374218 CENPQQ7L2Z9 268 aaPredicted RBP11.35□□□□□ -0.59
PTPN20-201ENST00000374218 RPGRQ92834 1020 aaKnown RBP11.35□□□□□ -0.59
PTPN20-201ENST00000374218 CDC5LQ99459 802 aaKnown RBP11.35□□□□□ -0.59
PTPN20-201ENST00000374218 PNMA6EA0A0J9YXQ4 647 aa11.34□□□□□ -0.59
PTPN20-201ENST00000374218 POLA2Q14181 598 aa11.34□□□□□ -0.59
PTPN20-201ENST00000374218 SPON1Q9HCB6 807 aa11.34□□□□□ -0.59
PTPN20-201ENST00000374218 RIC1Q4ADV7 1423 aa11.34□□□□□ -0.59
PTPN20-201ENST00000374218 SURF6O75683 361 aaKnown RBP11.34□□□□□ -0.59
PTPN20-201ENST00000374218 OS9Q13438 667 aaPredicted RBP11.34□□□□□ -0.59
PTPN20-201ENST00000374218 SIRT2Q8IXJ6 389 aa11.34□□□□□ -0.59
PTPN20-201ENST00000374218 CCDC24Q8N4L8 307 aa11.34□□□□□ -0.59
PTPN20-201ENST00000374218 AFDNP55196 1824 aaKnown RBP11.34□□□□□ -0.59
PTPN20-201ENST00000374218 ABCC12Q96J65 1359 aa11.34□□□□□ -0.59
PTPN20-201ENST00000374218 ITGA6P23229 1130 aa11.34□□□□□ -0.59
PTPN20-201ENST00000374218 G3BP1Q13283 466 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTPN20-201ENST00000374218 FAM161AQ3B820 660 aa11.34□□□□□ -0.59
PTPN20-201ENST00000374218 CCDC85AQ96PX6 553 aaPredicted RBP11.34□□□□□ -0.59
PTPN20-201ENST00000374218 RTL9Q8NET4 1388 aa11.33□□□□□ -0.6
PTPN20-201ENST00000374218 IGHMBP2P38935 993 aaKnown RBP11.33□□□□□ -0.6
PTPN20-201ENST00000374218 ERC1Q8IUD2 1116 aa11.33□□□□□ -0.6
PTPN20-201ENST00000374218 RBM17Q96I25 401 aaKnown RBP11.33□□□□□ -0.6
PTPN20-201ENST00000374218 GREM2Q9H772 168 aa11.33□□□□□ -0.6
PTPN20-201ENST00000374218 DCTPP1Q9H773 170 aa11.33□□□□□ -0.6
PTPN20-201ENST00000374218 COPRSQ9NQ92 184 aa11.33□□□□□ -0.6
PTPN20-201ENST00000374218 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
PTPN20-201ENST00000374218 TUBGCP6Q96RT7 1819 aa11.33□□□□□ -0.6
PTPN20-201ENST00000374218 RAB11FIP3O75154 756 aa11.33□□□□□ -0.6
PTPN20-201ENST00000374218 MPHOSPH8Q99549 860 aa11.33□□□□□ -0.6
PTPN20-201ENST00000374218 H0YIN7 160 aa11.32□□□□□ -0.6
PTPN20-201ENST00000374218 IGHDP01880 384 aa11.32□□□□□ -0.6
PTPN20-201ENST00000374218 KLRG2A4D1S0 409 aaPredicted RBP11.32□□□□□ -0.6
PTPN20-201ENST00000374218 CRY2Q49AN0 593 aa11.32□□□□□ -0.6
PTPN20-201ENST00000374218 ANKRD18AQ8IVF6 992 aa11.32□□□□□ -0.6
PTPN20-201ENST00000374218 NOP58Q9Y2X3 529 aaKnown RBP11.32□□□□□ -0.6
PTPN20-201ENST00000374218 COL24A1Q17RW2 1714 aa11.32□□□□□ -0.6
PTPN20-201ENST00000374218 NPR1P16066 1061 aa11.31□□□□□ -0.6
PTPN20-201ENST00000374218 LDHAL6AQ6ZMR3 332 aa11.31□□□□□ -0.6
PTPN20-201ENST00000374218 TMX4Q9H1E5 349 aaPredicted RBP11.31□□□□□ -0.6
PTPN20-201ENST00000374218 ALDH1B1P30837 517 aa11.31□□□□□ -0.6
PTPN20-201ENST00000374218 PTPN12Q05209 780 aaKnown RBP11.31□□□□□ -0.6
PTPN20-201ENST00000374218 CNNM1Q9NRU3 951 aa11.31□□□□□ -0.6
PTPN20-201ENST00000374218 CIAO1O76071 339 aa11.3□□□□□ -0.6
PTPN20-201ENST00000374218 HOXA10P31260 410 aaPredicted RBP11.3□□□□□ -0.6
PTPN20-201ENST00000374218 IL15P40933 162 aaPredicted RBP11.3□□□□□ -0.6
PTPN20-201ENST00000374218 RFX5P48382 616 aaPredicted RBP11.3□□□□□ -0.6
PTPN20-201ENST00000374218 RPS8P62241 208 aaKnown RBP11.3□□□□□ -0.6
PTPN20-201ENST00000374218 C2CD5Q86YS7 1000 aa11.3□□□□□ -0.6
PTPN20-201ENST00000374218 SMC5Q8IY18 1101 aa11.3□□□□□ -0.6
PTPN20-201ENST00000374218 MASTLQ96GX5 879 aa11.3□□□□□ -0.6
PTPN20-201ENST00000374218 ANP32EQ9BTT0 268 aa11.3□□□□□ -0.6
PTPN20-201ENST00000374218 EYA2O00167 538 aa11.3□□□□□ -0.6
PTPN20-201ENST00000374218 BBOX1O75936 387 aa11.3□□□□□ -0.6
PTPN20-201ENST00000374218 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
PTPN20-201ENST00000374218 TMC4Q7Z404 712 aa11.3□□□□□ -0.6
PTPN20-201ENST00000374218 CRAMP1Q96RY5 1269 aa11.3□□□□□ -0.6
PTPN20-201ENST00000374218 SIL1Q9H173 461 aa11.3□□□□□ -0.6
PTPN20-201ENST00000374218 EXOC6BQ9Y2D4 811 aa11.3□□□□□ -0.6
PTPN20-201ENST00000374218 SRGNP10124 158 aa11.3□□□□□ -0.6
PTPN20-201ENST00000374218 KIF1BPQ96EK5 621 aa11.3□□□□□ -0.6
PTPN20-201ENST00000374218 PA2G4Q9UQ80 394 aaKnown RBP11.3□□□□□ -0.6
PTPN20-201ENST00000374218 TGFB2P61812 414 aa11.29□□□□□ -0.6
PTPN20-201ENST00000374218 GRAPQ13588 217 aa11.29□□□□□ -0.6
PTPN20-201ENST00000374218 ANKRD45Q5TZF3 282 aa11.29□□□□□ -0.6
PTPN20-201ENST00000374218 GRAPLQ8TC17 118 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-201ENST00000374218 CNKSR1Q969H4 720 aa11.29□□□□□ -0.6
PTPN20-201ENST00000374218 LRRCC1Q9C099 1032 aa11.29□□□□□ -0.6
PTPN20-201ENST00000374218 SEC31BQ9NQW1 1179 aa11.29□□□□□ -0.6
PTPN20-201ENST00000374218 PPP1R1BQ9UD71 204 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-201ENST00000374218 CD2APQ9Y5K6 639 aa11.29□□□□□ -0.6
PTPN20-201ENST00000374218 STYK1Q6J9G0 422 aa11.29□□□□□ -0.6
PTPN20-201ENST00000374218 KLHDC4Q8TBB5 520 aa11.29□□□□□ -0.6
PTPN20-201ENST00000374218 ZNF622Q969S3 477 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTPN20-201ENST00000374218 ZNF594Q96JF6 807 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-201ENST00000374218 BSDC1Q9NW68 430 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-201ENST00000374218 CEP126Q9P2H0 1117 aa11.29□□□□□ -0.6
PTPN20-201ENST00000374218 KDM2BQ8NHM5 1336 aa11.28□□□□□ -0.6
PTPN20-201ENST00000374218 APBB1O00213 710 aa11.28□□□□□ -0.6
PTPN20-201ENST00000374218 SGIP1Q9BQI5 828 aa11.28□□□□□ -0.6
PTPN20-201ENST00000374218 MROH5Q6ZUA9 1318 aa11.28□□□□□ -0.6
PTPN20-201ENST00000374218 PTGER2P43116 358 aa11.28□□□□□ -0.6
PTPN20-201ENST00000374218 CLASRPQ8N2M8 674 aaKnown RBP11.28□□□□□ -0.6
PTPN20-201ENST00000374218 METTL24Q5JXM2 366 aa11.27□□□□□ -0.6
PTPN20-201ENST00000374218 KLHL34Q8N239 644 aa11.27□□□□□ -0.6
PTPN20-201ENST00000374218 RHPN1Q8TCX5 695 aa11.27□□□□□ -0.6
PTPN20-201ENST00000374218 AKAP2Q9Y2D5 859 aa11.27□□□□□ -0.6
PTPN20-201ENST00000374218 C10orf71Q711Q0 1435 aa11.27□□□□□ -0.6
PTPN20-201ENST00000374218 CASZ1Q86V15 1759 aa11.27□□□□□ -0.61
PTPN20-201ENST00000374218 CELF1Q92879 486 aaKnown RBP11.27□□□□□ -0.61
PTPN20-201ENST00000374218 ANKRD2Q9GZV1 360 aa11.27□□□□□ -0.61
PTPN20-201ENST00000374218 NUCB1Q02818 461 aa11.26□□□□□ -0.61
PTPN20-201ENST00000374218 CHD1LQ86WJ1 897 aa11.26□□□□□ -0.61
PTPN20-201ENST00000374218 RIPOR2Q9Y4F9 1068 aa11.26□□□□□ -0.61
PTPN20-201ENST00000374218 NRXN2Q9P2S2 1712 aa11.26□□□□□ -0.61
PTPN20-201ENST00000374218 LRRC24Q50LG9 513 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms