RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 CNBD1Q8NA66 436 aa21.85■■□□□ 1.09
C9orf43-202ENST00000374165 LAMB2P55268 1798 aa21.85■■□□□ 1.09
C9orf43-202ENST00000374165 TAF1P21675 1872 aa21.85■■□□□ 1.09
C9orf43-202ENST00000374165 FAM161AQ3B820 660 aa21.85■■□□□ 1.09
C9orf43-202ENST00000374165 SLC10A5Q5PT55 438 aa21.85■■□□□ 1.09
C9orf43-202ENST00000374165 GREM2Q9H772 168 aa21.85■■□□□ 1.09
C9orf43-202ENST00000374165 NPHP1O15259 732 aa21.84■■□□□ 1.09
C9orf43-202ENST00000374165 RFX5P48382 616 aaPredicted RBP21.84■■□□□ 1.09
C9orf43-202ENST00000374165 DCTPP1Q9H773 170 aa21.84■■□□□ 1.09
C9orf43-202ENST00000374165 EXOC6BQ9Y2D4 811 aa21.84■■□□□ 1.09
C9orf43-202ENST00000374165 ZBTB7AO95365 584 aa21.84■■□□□ 1.09
C9orf43-202ENST00000374165 TNRC6CQ9HCJ0 1690 aaKnown RBP21.83■■□□□ 1.09
C9orf43-202ENST00000374165 HMMRO75330 724 aa21.83■■□□□ 1.09
C9orf43-202ENST00000374165 SMC5Q8IY18 1101 aa21.83■■□□□ 1.09
C9orf43-202ENST00000374165 NRXN2Q9P2S2 1712 aa21.83■■□□□ 1.08
C9orf43-202ENST00000374165 ZNF594Q96JF6 807 aaPredicted RBP21.82■■□□□ 1.08
C9orf43-202ENST00000374165 PTPN12Q05209 780 aaKnown RBP21.82■■□□□ 1.08
C9orf43-202ENST00000374165 COL4A1P02462 1669 aa21.82■■□□□ 1.08
C9orf43-202ENST00000374165 APBB1O00213 710 aa21.81■■□□□ 1.08
C9orf43-202ENST00000374165 PARP3Q9Y6F1 533 aa21.81■■□□□ 1.08
C9orf43-202ENST00000374165 SURF6O75683 361 aaKnown RBP21.8■■□□□ 1.08
C9orf43-202ENST00000374165 SLC16A10Q8TF71 515 aa21.8■■□□□ 1.08
C9orf43-202ENST00000374165 SIL1Q9H173 461 aa21.8■■□□□ 1.08
C9orf43-202ENST00000374165 SEC31BQ9NQW1 1179 aa21.8■■□□□ 1.08
C9orf43-202ENST00000374165 RBM19Q9Y4C8 960 aaKnown RBP21.8■■□□□ 1.08
C9orf43-202ENST00000374165 ANKRD31Q8N7Z5 1873 aa21.8■■□□□ 1.08
C9orf43-202ENST00000374165 ITGA6P23229 1130 aa21.8■■□□□ 1.08
C9orf43-202ENST00000374165 ATF5Q9Y2D1 282 aaPredicted RBP21.79■■□□□ 1.08
C9orf43-202ENST00000374165 SF3B3Q15393 1217 aaKnown RBP21.79■■□□□ 1.08
C9orf43-202ENST00000374165 CCDC57Q2TAC2 916 aa21.79■■□□□ 1.08
C9orf43-202ENST00000374165 NLRP3Q96P20 1036 aa21.79■■□□□ 1.08
C9orf43-202ENST00000374165 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.79■■□□□ 1.08
C9orf43-202ENST00000374165 IFIT5Q13325 482 aaKnown RBP21.78■■□□□ 1.08
C9orf43-202ENST00000374165 GCC1Q96CN9 775 aa21.78■■□□□ 1.08
C9orf43-202ENST00000374165 NOP58Q9Y2X3 529 aaKnown RBP21.78■■□□□ 1.08
C9orf43-202ENST00000374165 BCL11AQ9H165 835 aa21.77■■□□□ 1.08
C9orf43-202ENST00000374165 COPRSQ9NQ92 184 aa21.77■■□□□ 1.08
C9orf43-202ENST00000374165 ST5P78524 1137 aa21.77■■□□□ 1.07
C9orf43-202ENST00000374165 PUS3Q9BZE2 481 aaKnown RBP21.77■■□□□ 1.07
C9orf43-202ENST00000374165 SMARCA5O60264 1052 aaPredicted RBP21.76■■□□□ 1.07
C9orf43-202ENST00000374165 HSP90B1P14625 803 aaKnown RBP21.76■■□□□ 1.07
C9orf43-202ENST00000374165 CCDC152Q4G0S7 254 aa21.76■■□□□ 1.07
C9orf43-202ENST00000374165 ANKRD45Q5TZF3 282 aa21.76■■□□□ 1.07
C9orf43-202ENST00000374165 PDZRN3Q9UPQ7 1066 aa21.76■■□□□ 1.07
C9orf43-202ENST00000374165 LRRC24Q50LG9 513 aa21.75■■□□□ 1.07
C9orf43-202ENST00000374165 MTFR1LQ9H019 292 aa21.75■■□□□ 1.07
C9orf43-202ENST00000374165 ANKRD18BA2A2Z9 1011 aa21.74■■□□□ 1.07
C9orf43-202ENST00000374165 SASH1O94885 1247 aa21.74■■□□□ 1.07
C9orf43-202ENST00000374165 NUCB1Q02818 461 aa21.74■■□□□ 1.07
C9orf43-202ENST00000374165 UTRNP46939 3433 aa21.74■■□□□ 1.07
C9orf43-202ENST00000374165 SPEF2Q9C093 1822 aa21.74■■□□□ 1.07
C9orf43-202ENST00000374165 ATG9AQ7Z3C6 839 aa21.73■■□□□ 1.07
C9orf43-202ENST00000374165 BRIP1Q9BX63 1249 aa21.73■■□□□ 1.07
C9orf43-202ENST00000374165 LNPKQ9C0E8 428 aa21.73■■□□□ 1.07
C9orf43-202ENST00000374165 CRY2Q49AN0 593 aa21.73■■□□□ 1.07
C9orf43-202ENST00000374165 CELF1Q92879 486 aaKnown RBP21.73■■□□□ 1.07
C9orf43-202ENST00000374165 RTL9Q8NET4 1388 aa21.72■■□□□ 1.07
C9orf43-202ENST00000374165 RIC1Q4ADV7 1423 aa21.72■■□□□ 1.07
C9orf43-202ENST00000374165 KLRG2A4D1S0 409 aaPredicted RBP21.72■■□□□ 1.07
C9orf43-202ENST00000374165 IL1RAPL2Q9NP60 686 aa21.72■■□□□ 1.07
C9orf43-202ENST00000374165 SLC51AQ86UW1 340 aa21.72■■□□□ 1.07
C9orf43-202ENST00000374165 CHD1LQ86WJ1 897 aa21.72■■□□□ 1.07
C9orf43-202ENST00000374165 C16orf71Q8IYS4 520 aaPredicted RBP21.72■■□□□ 1.07
C9orf43-202ENST00000374165 G3BP1Q13283 466 aaKnown RBP eCLIP21.71■■□□□ 1.07
C9orf43-202ENST00000374165 OS9Q13438 667 aaPredicted RBP21.71■■□□□ 1.07
C9orf43-202ENST00000374165 TAF7LQ5H9L4 462 aa21.71■■□□□ 1.07
C9orf43-202ENST00000374165 LDHAL6AQ6ZMR3 332 aa21.71■■□□□ 1.07
C9orf43-202ENST00000374165 RHPN1Q8TCX5 695 aa21.71■■□□□ 1.07
C9orf43-202ENST00000374165 SGIP1Q9BQI5 828 aa21.71■■□□□ 1.07
C9orf43-202ENST00000374165 EYA2O00167 538 aa21.7■■□□□ 1.06
C9orf43-202ENST00000374165 PDE4AP27815 886 aa21.7■■□□□ 1.06
C9orf43-202ENST00000374165 LRRCC1Q9C099 1032 aa21.7■■□□□ 1.06
C9orf43-202ENST00000374165 RIPOR2Q9Y4F9 1068 aa21.7■■□□□ 1.06
C9orf43-202ENST00000374165 COL11A2P13942 1736 aaPredicted RBP21.69■■□□□ 1.06
C9orf43-202ENST00000374165 RAB11FIP3O75154 756 aa21.68■■□□□ 1.06
C9orf43-202ENST00000374165 SRGNP10124 158 aa21.68■■□□□ 1.06
C9orf43-202ENST00000374165 PTGER2P43116 358 aa21.68■■□□□ 1.06
C9orf43-202ENST00000374165 OTUD7AQ8TE49 926 aaPredicted RBP21.68■■□□□ 1.06
C9orf43-202ENST00000374165 TFCP2Q12800 502 aa21.68■■□□□ 1.06
C9orf43-202ENST00000374165 HSP90AB4PQ58FF6 505 aa21.68■■□□□ 1.06
C9orf43-202ENST00000374165 DDX46Q7L014 1031 aaKnown RBP21.67■■□□□ 1.06
C9orf43-202ENST00000374165 RPGRQ92834 1020 aaKnown RBP21.67■■□□□ 1.06
C9orf43-202ENST00000374165 KIF1BPQ96EK5 621 aa21.67■■□□□ 1.06
C9orf43-202ENST00000374165 CIAO1O76071 339 aa21.67■■□□□ 1.06
C9orf43-202ENST00000374165 CHRNA5P30532 468 aa21.67■■□□□ 1.06
C9orf43-202ENST00000374165 RPS8P62241 208 aaKnown RBP21.67■■□□□ 1.06
C9orf43-202ENST00000374165 CDC5LQ99459 802 aaKnown RBP21.67■■□□□ 1.06
C9orf43-202ENST00000374165 MPHOSPH8Q99549 860 aa21.67■■□□□ 1.06
C9orf43-202ENST00000374165 CNNM1Q9NRU3 951 aa21.67■■□□□ 1.06
C9orf43-202ENST00000374165 LRP5O75197 1615 aa21.66■■□□□ 1.06
C9orf43-202ENST00000374165 PDE6BP35913 854 aa21.66■■□□□ 1.06
C9orf43-202ENST00000374165 ANKRD18AQ8IVF6 992 aa21.66■■□□□ 1.06
C9orf43-202ENST00000374165 HOXA10P31260 410 aaPredicted RBP21.65■■□□□ 1.06
C9orf43-202ENST00000374165 IL15P40933 162 aaPredicted RBP21.65■■□□□ 1.06
C9orf43-202ENST00000374165 RGS3P49796 1198 aa21.65■■□□□ 1.06
C9orf43-202ENST00000374165 HELBQ8NG08 1087 aaPredicted RBP21.65■■□□□ 1.06
C9orf43-202ENST00000374165 C10orf71Q711Q0 1435 aa21.65■■□□□ 1.06
C9orf43-202ENST00000374165 POLD1P28340 1107 aa21.65■■□□□ 1.06
C9orf43-202ENST00000374165 IGHMBP2P38935 993 aaKnown RBP21.65■■□□□ 1.06
C9orf43-202ENST00000374165 WTIPA6NIX2 430 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms