RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 PKN2Q16513 984 aaKnown RBP16.76■□□□□ 0.27
HDAC8-204ENST00000373560 CC2D2BQ6DHV5 1058 aa16.76■□□□□ 0.27
HDAC8-204ENST00000373560 TEX13AQ9BXU3 409 aaPredicted RBP16.76■□□□□ 0.27
HDAC8-204ENST00000373560 HDAC9Q9UKV0 1011 aa16.76■□□□□ 0.27
HDAC8-204ENST00000373560 ZNRF3Q9ULT6 936 aa16.76■□□□□ 0.27
HDAC8-204ENST00000373560 DUOX1Q9NRD9 1551 aa16.76■□□□□ 0.27
HDAC8-204ENST00000373560 FBXO46Q6PJ61 603 aaPredicted RBP16.75■□□□□ 0.27
HDAC8-204ENST00000373560 SAMD7Q7Z3H4 446 aa16.75■□□□□ 0.27
HDAC8-204ENST00000373560 IL17REQ8NFR9 667 aa16.75■□□□□ 0.27
HDAC8-204ENST00000373560 TRIOBPQ9H2D6 2365 aa16.75■□□□□ 0.27
HDAC8-204ENST00000373560 CDHR2Q9BYE9 1310 aa16.74■□□□□ 0.27
HDAC8-204ENST00000373560 YDJCA8MPS7 323 aa16.74■□□□□ 0.27
HDAC8-204ENST00000373560 NBPF26B4DH59 902 aa16.74■□□□□ 0.27
HDAC8-204ENST00000373560 HOXA10P31260 410 aaPredicted RBP16.74■□□□□ 0.27
HDAC8-204ENST00000373560 NBPF10Q6P3W6 841 aaKnown RBP16.74■□□□□ 0.27
HDAC8-204ENST00000373560 KRT26Q7Z3Y9 468 aa16.74■□□□□ 0.27
HDAC8-204ENST00000373560 NPM2Q86SE8 214 aaKnown RBP16.74■□□□□ 0.27
HDAC8-204ENST00000373560 MICALL2Q8IY33 904 aa16.74■□□□□ 0.27
HDAC8-204ENST00000373560 C2orf69Q8N8R5 385 aa16.74■□□□□ 0.27
HDAC8-204ENST00000373560 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
HDAC8-204ENST00000373560 CNOT7Q9UIV1 285 aaKnown RBP16.74■□□□□ 0.27
HDAC8-204ENST00000373560 ZNF652Q9Y2D9 606 aa16.74■□□□□ 0.27
HDAC8-204ENST00000373560 COL6A3P12111 3177 aa16.74■□□□□ 0.27
HDAC8-204ENST00000373560 LAMB2P55268 1798 aa16.74■□□□□ 0.27
HDAC8-204ENST00000373560 ASTN2O75129 1339 aaPredicted RBP16.73■□□□□ 0.27
HDAC8-204ENST00000373560 FMNL2Q96PY5 1086 aa16.73■□□□□ 0.27
HDAC8-204ENST00000373560 FARP1Q9Y4F1 1045 aaPredicted RBP16.73■□□□□ 0.27
HDAC8-204ENST00000373560 TBC1D10BQ4KMP7 808 aaPredicted RBP16.72■□□□□ 0.27
HDAC8-204ENST00000373560 RPGRQ92834 1020 aaKnown RBP16.72■□□□□ 0.27
HDAC8-204ENST00000373560 R3HDMLQ9H3Y0 253 aa16.72■□□□□ 0.27
HDAC8-204ENST00000373560 TAF1P21675 1872 aa16.71■□□□□ 0.27
HDAC8-204ENST00000373560 SLC17A8Q8NDX2 589 aa16.71■□□□□ 0.27
HDAC8-204ENST00000373560 KIF7Q2M1P5 1343 aa16.7■□□□□ 0.26
HDAC8-204ENST00000373560 LAMB4A4D0S4 1761 aa16.7■□□□□ 0.26
HDAC8-204ENST00000373560 KDM3BQ7LBC6 1761 aa16.7■□□□□ 0.26
HDAC8-204ENST00000373560 GPR25O00155 361 aa16.7■□□□□ 0.26
HDAC8-204ENST00000373560 GTF2E1P29083 439 aaPredicted RBP16.7■□□□□ 0.26
HDAC8-204ENST00000373560 TEFQ10587 303 aa16.7■□□□□ 0.26
HDAC8-204ENST00000373560 POLR3GLQ9BT43 218 aa16.7■□□□□ 0.26
HDAC8-204ENST00000373560 UBN2Q6ZU65 1347 aa16.7■□□□□ 0.26
HDAC8-204ENST00000373560 MOB2Q70IA6 237 aa16.69■□□□□ 0.26
HDAC8-204ENST00000373560 EN2P19622 333 aaPredicted RBP16.68■□□□□ 0.26
HDAC8-204ENST00000373560 CDCA5Q96FF9 252 aa16.68■□□□□ 0.26
HDAC8-204ENST00000373560 CRAMP1Q96RY5 1269 aa16.68■□□□□ 0.26
HDAC8-204ENST00000373560 RTFDC1Q9BY42 306 aaPredicted RBP16.68■□□□□ 0.26
HDAC8-204ENST00000373560 A0A0C4DFX4 3053 aa16.67■□□□□ 0.26
HDAC8-204ENST00000373560 KIAA2012Q0VF49 1180 aa16.67■□□□□ 0.26
HDAC8-204ENST00000373560 RBM26Q5T8P6 1007 aaKnown RBP16.67■□□□□ 0.26
HDAC8-204ENST00000373560 MORC1Q86VD1 984 aa16.67■□□□□ 0.26
HDAC8-204ENST00000373560 KIAA0100Q14667 2235 aaKnown RBP16.67■□□□□ 0.26
HDAC8-204ENST00000373560 CUL9Q8IWT3 2517 aa16.66■□□□□ 0.26
HDAC8-204ENST00000373560 CEMIPQ8WUJ3 1361 aa16.66■□□□□ 0.26
HDAC8-204ENST00000373560 LRRC37AA6NMS7 1700 aa16.66■□□□□ 0.26
HDAC8-204ENST00000373560 H7C1D1 291 aa16.66■□□□□ 0.26
HDAC8-204ENST00000373560 GRIPAP1Q4V328 841 aa16.66■□□□□ 0.26
HDAC8-204ENST00000373560 RBM17Q96I25 401 aaKnown RBP16.66■□□□□ 0.26
HDAC8-204ENST00000373560 GGA3Q9NZ52 723 aa16.66■□□□□ 0.26
HDAC8-204ENST00000373560 ATP6V0A2Q9Y487 856 aa16.66■□□□□ 0.26
HDAC8-204ENST00000373560 ABCC4O15439 1325 aa16.66■□□□□ 0.26
HDAC8-204ENST00000373560 RANBP2P49792 3224 aaKnown RBP16.66■□□□□ 0.26
HDAC8-204ENST00000373560 SCN9AQ15858 1988 aa16.66■□□□□ 0.26
HDAC8-204ENST00000373560 PSMD14O00487 310 aa16.65■□□□□ 0.26
HDAC8-204ENST00000373560 GPTP24298 496 aa16.65■□□□□ 0.26
HDAC8-204ENST00000373560 TNIP1Q15025 636 aa16.65■□□□□ 0.26
HDAC8-204ENST00000373560 OTUD5Q96G74 571 aa16.65■□□□□ 0.26
HDAC8-204ENST00000373560 COL4A1P02462 1669 aa16.65■□□□□ 0.26
HDAC8-204ENST00000373560 MKRN3Q13064 507 aaKnown RBP16.64■□□□□ 0.25
HDAC8-204ENST00000373560 SUSD4Q5VX71 490 aa16.64■□□□□ 0.25
HDAC8-204ENST00000373560 ZBTB47Q9UFB7 747 aaPredicted RBP16.64■□□□□ 0.25
HDAC8-204ENST00000373560 CEP290O15078 2479 aa16.64■□□□□ 0.25
HDAC8-204ENST00000373560 DDX60Q8IY21 1712 aaKnown RBP16.63■□□□□ 0.25
HDAC8-204ENST00000373560 RGL2O15211 777 aa16.63■□□□□ 0.25
HDAC8-204ENST00000373560 NTSR2O95665 410 aa16.63■□□□□ 0.25
HDAC8-204ENST00000373560 DPP8Q6V1X1 898 aaPredicted RBP16.63■□□□□ 0.25
HDAC8-204ENST00000373560 DCPSQ96C86 337 aaKnown RBP16.63■□□□□ 0.25
HDAC8-204ENST00000373560 NYXQ9GZU5 481 aa16.63■□□□□ 0.25
HDAC8-204ENST00000373560 VPS33BQ9H267 617 aa16.63■□□□□ 0.25
HDAC8-204ENST00000373560 PANK3Q9H999 370 aa16.63■□□□□ 0.25
HDAC8-204ENST00000373560 KCNQ5Q9NR82 932 aa16.63■□□□□ 0.25
HDAC8-204ENST00000373560 SCAF8Q9UPN6 1271 aaKnown RBP16.63■□□□□ 0.25
HDAC8-204ENST00000373560 RTL9Q8NET4 1388 aa16.63■□□□□ 0.25
HDAC8-204ENST00000373560 IBTKQ9P2D0 1353 aaPredicted RBP16.63■□□□□ 0.25
HDAC8-204ENST00000373560 ANKRD36CQ5JPF3 1778 aa16.62■□□□□ 0.25
HDAC8-204ENST00000373560 BTBD11A6QL63 1104 aa16.62■□□□□ 0.25
HDAC8-204ENST00000373560 GNAT3A8MTJ3 354 aa16.62■□□□□ 0.25
HDAC8-204ENST00000373560 H0YGN5 161 aa16.62■□□□□ 0.25
HDAC8-204ENST00000373560 FKTNO75072 461 aa16.62■□□□□ 0.25
HDAC8-204ENST00000373560 NOM1Q5C9Z4 860 aaKnown RBP16.61■□□□□ 0.25
HDAC8-204ENST00000373560 NGEFQ8N5V2 710 aa16.61■□□□□ 0.25
HDAC8-204ENST00000373560 SUPT20HQ8NEM7 779 aa16.61■□□□□ 0.25
HDAC8-204ENST00000373560 DBNDD1Q9H9R9 158 aa16.61■□□□□ 0.25
HDAC8-204ENST00000373560 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
HDAC8-204ENST00000373560 HAX1O00165 279 aa16.6■□□□□ 0.25
HDAC8-204ENST00000373560 MNX1P50219 401 aaPredicted RBP16.6■□□□□ 0.25
HDAC8-204ENST00000373560 CAP1Q01518 475 aa16.6■□□□□ 0.25
HDAC8-204ENST00000373560 KIF4BQ2VIQ3 1234 aa16.6■□□□□ 0.25
HDAC8-204ENST00000373560 TTLL7Q6ZT98 887 aa16.6■□□□□ 0.25
HDAC8-204ENST00000373560 OTOP1Q7RTM1 612 aa16.6■□□□□ 0.25
HDAC8-204ENST00000373560 MPNDQ8N594 471 aa16.6■□□□□ 0.25
HDAC8-204ENST00000373560 DPF2Q92785 391 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms