RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 DDX46Q7L014 1031 aaKnown RBP23.1■■□□□ 1.29
PBX3-202ENST00000373482 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.1■■□□□ 1.29
PBX3-202ENST00000373482 CRAMP1Q96RY5 1269 aa23.1■■□□□ 1.29
PBX3-202ENST00000373482 GRIN3BO60391 1043 aa23.09■■□□□ 1.29
PBX3-202ENST00000373482 YBX3P16989 372 aaKnown RBP eCLIP23.09■■□□□ 1.29
PBX3-202ENST00000373482 CCDC152Q4G0S7 254 aa23.09■■□□□ 1.29
PBX3-202ENST00000373482 DZIP1LQ8IYY4 767 aaKnown RBP23.09■■□□□ 1.29
PBX3-202ENST00000373482 PLA2G12BQ9BX93 195 aa23.09■■□□□ 1.29
PBX3-202ENST00000373482 CTSWP56202 376 aa23.08■■□□□ 1.29
PBX3-202ENST00000373482 PRPF40BQ6NWY9 871 aaKnown RBP23.08■■□□□ 1.29
PBX3-202ENST00000373482 UTYO14607 1347 aa23.08■■□□□ 1.28
PBX3-202ENST00000373482 TNNQ9UQP3 1299 aa23.07■■□□□ 1.28
PBX3-202ENST00000373482 DICER1Q9UPY3 1922 aaKnown RBP23.07■■□□□ 1.28
PBX3-202ENST00000373482 NBPF7P0C2Y1 421 aaPredicted RBP23.06■■□□□ 1.28
PBX3-202ENST00000373482 USP44Q9H0E7 712 aa23.06■■□□□ 1.28
PBX3-202ENST00000373482 HDAC5Q9UQL6 1122 aa23.06■■□□□ 1.28
PBX3-202ENST00000373482 GOLGB1Q14789 3259 aaKnown RBP23.06■■□□□ 1.28
PBX3-202ENST00000373482 LRRC37AA6NMS7 1700 aa23.05■■□□□ 1.28
PBX3-202ENST00000373482 GRAPQ13588 217 aa23.05■■□□□ 1.28
PBX3-202ENST00000373482 SOGA3Q5TF21 947 aa23.05■■□□□ 1.28
PBX3-202ENST00000373482 TTLL11Q8NHH1 800 aa23.05■■□□□ 1.28
PBX3-202ENST00000373482 GRAPLQ8TC17 118 aaPredicted RBP23.05■■□□□ 1.28
PBX3-202ENST00000373482 UBTFL1P0CB47 393 aaPredicted RBP23.04■■□□□ 1.28
PBX3-202ENST00000373482 TMEM57Q8N5G2 664 aa23.04■■□□□ 1.28
PBX3-202ENST00000373482 TMX4Q9H1E5 349 aaPredicted RBP23.04■■□□□ 1.28
PBX3-202ENST00000373482 ZNF219Q9P2Y4 722 aaPredicted RBP23.04■■□□□ 1.28
PBX3-202ENST00000373482 PPEF1O14829 653 aaPredicted RBP23.03■■□□□ 1.28
PBX3-202ENST00000373482 C21orf2O43822 256 aa23.03■■□□□ 1.28
PBX3-202ENST00000373482 BBOX1O75936 387 aa23.03■■□□□ 1.28
PBX3-202ENST00000373482 CCDC85AQ96PX6 553 aaPredicted RBP23.03■■□□□ 1.28
PBX3-202ENST00000373482 RTL9Q8NET4 1388 aa23.02■■□□□ 1.28
PBX3-202ENST00000373482 GNAI3P08754 354 aa23.02■■□□□ 1.28
PBX3-202ENST00000373482 TMC4Q7Z404 712 aa23.02■■□□□ 1.28
PBX3-202ENST00000373482 ITPRIPQ8IWB1 547 aa23.02■■□□□ 1.28
PBX3-202ENST00000373482 SUCLG2Q96I99 432 aa23.02■■□□□ 1.28
PBX3-202ENST00000373482 PLIN1O60240 522 aa23.01■■□□□ 1.27
PBX3-202ENST00000373482 CSF1RP07333 972 aa23.01■■□□□ 1.27
PBX3-202ENST00000373482 FOXO4P98177 505 aa23.01■■□□□ 1.27
PBX3-202ENST00000373482 ARHGAP27Q6ZUM4 889 aa23.01■■□□□ 1.27
PBX3-202ENST00000373482 CDC5LQ99459 802 aaKnown RBP23.01■■□□□ 1.27
PBX3-202ENST00000373482 CHMP3Q9Y3E7 222 aa23.01■■□□□ 1.27
PBX3-202ENST00000373482 A0A1B0GUL6 1792 aa23.01■■□□□ 1.27
PBX3-202ENST00000373482 RLBP1P12271 317 aa23■■□□□ 1.27
PBX3-202ENST00000373482 CC2D2BQ6DHV5 1058 aa23■■□□□ 1.27
PBX3-202ENST00000373482 LMBR1LQ6UX01 489 aa23■■□□□ 1.27
PBX3-202ENST00000373482 GREM2Q9H772 168 aa23■■□□□ 1.27
PBX3-202ENST00000373482 SEC31BQ9NQW1 1179 aa23■■□□□ 1.27
PBX3-202ENST00000373482 COL4A1P02462 1669 aa23■■□□□ 1.27
PBX3-202ENST00000373482 RPS8P62241 208 aaKnown RBP22.99■■□□□ 1.27
PBX3-202ENST00000373482 CCDC93Q567U6 631 aa22.99■■□□□ 1.27
PBX3-202ENST00000373482 ANKRD18AQ8IVF6 992 aa22.99■■□□□ 1.27
PBX3-202ENST00000373482 PANK1Q8TE04 598 aa22.99■■□□□ 1.27
PBX3-202ENST00000373482 C7orf43Q8WVR3 580 aa22.99■■□□□ 1.27
PBX3-202ENST00000373482 CELF1Q92879 486 aaKnown RBP22.99■■□□□ 1.27
PBX3-202ENST00000373482 MEIS3Q99687 375 aa22.99■■□□□ 1.27
PBX3-202ENST00000373482 ANKRD18BA2A2Z9 1011 aa22.98■■□□□ 1.27
PBX3-202ENST00000373482 ITGA6P23229 1130 aa22.98■■□□□ 1.27
PBX3-202ENST00000373482 FAM161AQ3B820 660 aa22.98■■□□□ 1.27
PBX3-202ENST00000373482 GRIPAP1Q4V328 841 aa22.98■■□□□ 1.27
PBX3-202ENST00000373482 EPHA10Q5JZY3 1008 aa22.98■■□□□ 1.27
PBX3-202ENST00000373482 KAZALD1Q96I82 304 aa22.98■■□□□ 1.27
PBX3-202ENST00000373482 BICC1Q9H694 974 aaKnown RBP22.98■■□□□ 1.27
PBX3-202ENST00000373482 ATP6V0A2Q9Y487 856 aa22.98■■□□□ 1.27
PBX3-202ENST00000373482 IFIT5Q13325 482 aaKnown RBP22.97■■□□□ 1.27
PBX3-202ENST00000373482 PDE3AQ14432 1141 aa22.97■■□□□ 1.27
PBX3-202ENST00000373482 CCDC57Q2TAC2 916 aa22.97■■□□□ 1.27
PBX3-202ENST00000373482 SP8Q8IXZ3 490 aa22.97■■□□□ 1.27
PBX3-202ENST00000373482 RTKN2Q8IZC4 609 aa22.97■■□□□ 1.27
PBX3-202ENST00000373482 IGHMBP2P38935 993 aaKnown RBP22.96■■□□□ 1.27
PBX3-202ENST00000373482 TIAM2Q8IVF5 1701 aa22.96■■□□□ 1.27
PBX3-202ENST00000373482 RABL6Q3YEC7 729 aaPredicted RBP22.95■■□□□ 1.26
PBX3-202ENST00000373482 LTBP1Q14766 1721 aa22.94■■□□□ 1.26
PBX3-202ENST00000373482 RRP1P56182 461 aaKnown RBP22.94■■□□□ 1.26
PBX3-202ENST00000373482 MVPQ14764 893 aaKnown RBP22.94■■□□□ 1.26
PBX3-202ENST00000373482 TAF7LQ5H9L4 462 aa22.94■■□□□ 1.26
PBX3-202ENST00000373482 OLFM4Q6UX06 510 aa22.94■■□□□ 1.26
PBX3-202ENST00000373482 MPHOSPH8Q99549 860 aa22.94■■□□□ 1.26
PBX3-202ENST00000373482 LRRFIP2Q9Y608 721 aaKnown RBP22.94■■□□□ 1.26
PBX3-202ENST00000373482 GNAI2P04899 355 aa22.93■■□□□ 1.26
PBX3-202ENST00000373482 ANKRD44Q8N8A2 993 aa22.93■■□□□ 1.26
PBX3-202ENST00000373482 TAOK3Q9H2K8 898 aa22.93■■□□□ 1.26
PBX3-202ENST00000373482 CHMP4BQ9H444 224 aaKnown RBP22.93■■□□□ 1.26
PBX3-202ENST00000373482 DDX19BQ9UMR2 479 aa22.93■■□□□ 1.26
PBX3-202ENST00000373482 COG6Q9Y2V7 657 aa22.93■■□□□ 1.26
PBX3-202ENST00000373482 LTBP3Q9NS15 1303 aa22.92■■□□□ 1.26
PBX3-202ENST00000373482 UTRNP46939 3433 aa22.92■■□□□ 1.26
PBX3-202ENST00000373482 BSDC1Q9NW68 430 aaPredicted RBP22.92■■□□□ 1.26
PBX3-202ENST00000373482 NFKBIEO00221 500 aa22.91■■□□□ 1.26
PBX3-202ENST00000373482 ZBTB7BO15156 539 aaPredicted RBP22.91■■□□□ 1.26
PBX3-202ENST00000373482 FKBP4Q02790 459 aaKnown RBP eCLIP22.91■■□□□ 1.26
PBX3-202ENST00000373482 RASSF7Q02833 373 aa22.91■■□□□ 1.26
PBX3-202ENST00000373482 SNED1Q8TER0 1413 aa22.91■■□□□ 1.26
PBX3-202ENST00000373482 DPP8Q6V1X1 898 aaPredicted RBP22.9■■□□□ 1.26
PBX3-202ENST00000373482 MPNDQ8N594 471 aa22.9■■□□□ 1.26
PBX3-202ENST00000373482 C20orf194Q5TEA3 1177 aa22.89■■□□□ 1.25
PBX3-202ENST00000373482 SUPT20HQ8NEM7 779 aa22.89■■□□□ 1.25
PBX3-202ENST00000373482 PSMD1Q99460 953 aa22.89■■□□□ 1.25
PBX3-202ENST00000373482 NSFL1CQ9UNZ2 370 aaKnown RBP22.89■■□□□ 1.25
PBX3-202ENST00000373482 ANKIB1Q9P2G1 1089 aa22.88■■□□□ 1.25
PBX3-202ENST00000373482 LMNB1P20700 586 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms