RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 CACTINQ8WUQ7 758 aaKnown RBP11.56□□□□□ -0.56
CSMD2-203ENST00000373377 ZSCAN31Q96LW9 406 aaPredicted RBP11.56□□□□□ -0.56
CSMD2-203ENST00000373377 IGSF1Q8N6C5 1336 aa11.55□□□□□ -0.56
CSMD2-203ENST00000373377 XIRP1Q702N8 1843 aaKnown RBP11.55□□□□□ -0.56
CSMD2-203ENST00000373377 PRAMEF22A3QJZ6 481 aa11.55□□□□□ -0.56
CSMD2-203ENST00000373377 GTF2F1P35269 517 aaKnown RBP eCLIP11.55□□□□□ -0.56
CSMD2-203ENST00000373377 NCBP1Q09161 790 aaKnown RBP11.55□□□□□ -0.56
CSMD2-203ENST00000373377 ZSCAN25Q6NSZ9 544 aa11.55□□□□□ -0.56
CSMD2-203ENST00000373377 ZSWIM6Q9HCJ5 1215 aa11.55□□□□□ -0.56
CSMD2-203ENST00000373377 USP16Q9Y5T5 823 aa11.55□□□□□ -0.56
CSMD2-203ENST00000373377 CACNA1FO60840 1977 aa11.55□□□□□ -0.56
CSMD2-203ENST00000373377 G3BP1Q13283 466 aaKnown RBP eCLIP11.55□□□□□ -0.56
CSMD2-203ENST00000373377 CCDC144BQ3MJ40 725 aa11.55□□□□□ -0.56
CSMD2-203ENST00000373377 CCDC144CPQ8IYA2 1237 aa11.55□□□□□ -0.56
CSMD2-203ENST00000373377 ERICH4A6NGS2 130 aa11.54□□□□□ -0.56
CSMD2-203ENST00000373377 USP27XA6NNY8 438 aa11.54□□□□□ -0.56
CSMD2-203ENST00000373377 SLC27A2O14975 620 aa11.54□□□□□ -0.56
CSMD2-203ENST00000373377 TPM3P06753 285 aa11.54□□□□□ -0.56
CSMD2-203ENST00000373377 HSP90AB4PQ58FF6 505 aa11.54□□□□□ -0.56
CSMD2-203ENST00000373377 CCDC129Q6ZRS4 1044 aa11.54□□□□□ -0.56
CSMD2-203ENST00000373377 DNAJC2Q99543 621 aaKnown RBP11.54□□□□□ -0.56
CSMD2-203ENST00000373377 ZNF75DP51815 510 aa11.54□□□□□ -0.56
CSMD2-203ENST00000373377 PROSER3Q2NL68 480 aa11.54□□□□□ -0.56
CSMD2-203ENST00000373377 LEO1Q8WVC0 666 aaPredicted RBP11.54□□□□□ -0.56
CSMD2-203ENST00000373377 ZBTB9Q96C00 473 aa11.54□□□□□ -0.56
CSMD2-203ENST00000373377 BTBD11A6QL63 1104 aa11.54□□□□□ -0.56
CSMD2-203ENST00000373377 PIP4K2AP48426 406 aaPredicted RBP11.54□□□□□ -0.56
CSMD2-203ENST00000373377 POLA2Q14181 598 aa11.54□□□□□ -0.56
CSMD2-203ENST00000373377 BEND3Q5T5X7 828 aa11.54□□□□□ -0.56
CSMD2-203ENST00000373377 BRF1Q92994 677 aa11.54□□□□□ -0.56
CSMD2-203ENST00000373377 NPHP4O75161 1426 aaPredicted RBP11.54□□□□□ -0.56
CSMD2-203ENST00000373377 LMTK3Q96Q04 1460 aa11.53□□□□□ -0.56
CSMD2-203ENST00000373377 GORABQ5T7V8 394 aa11.53□□□□□ -0.56
CSMD2-203ENST00000373377 ZNF589Q86UQ0 364 aaPredicted RBP11.53□□□□□ -0.56
CSMD2-203ENST00000373377 EAF2Q96CJ1 260 aaPredicted RBP11.53□□□□□ -0.56
CSMD2-203ENST00000373377 AOX1Q06278 1338 aa11.53□□□□□ -0.56
CSMD2-203ENST00000373377 MYL6BP14649 208 aa11.53□□□□□ -0.56
CSMD2-203ENST00000373377 PDCP20941 246 aa11.53□□□□□ -0.56
CSMD2-203ENST00000373377 PSMA5P28066 241 aa11.53□□□□□ -0.56
CSMD2-203ENST00000373377 CCT2P78371 535 aaKnown RBP11.53□□□□□ -0.56
CSMD2-203ENST00000373377 CEP135Q66GS9 1140 aa11.53□□□□□ -0.56
CSMD2-203ENST00000373377 LRRC59Q96AG4 307 aaKnown RBP11.53□□□□□ -0.56
CSMD2-203ENST00000373377 EVI5LQ96CN4 794 aa11.53□□□□□ -0.56
CSMD2-203ENST00000373377 SCAND2PQ9GZW5 306 aaPredicted RBP11.53□□□□□ -0.56
CSMD2-203ENST00000373377 HOXC9P31274 260 aa11.52□□□□□ -0.56
CSMD2-203ENST00000373377 NECTIN1Q15223 517 aa11.52□□□□□ -0.56
CSMD2-203ENST00000373377 RNF20Q5VTR2 975 aa11.52□□□□□ -0.56
CSMD2-203ENST00000373377 RGPD5Q99666 1765 aa11.52□□□□□ -0.56
CSMD2-203ENST00000373377 CHST3Q7LGC8 479 aa11.52□□□□□ -0.57
CSMD2-203ENST00000373377 PGBD1Q96JS3 809 aa11.52□□□□□ -0.57
CSMD2-203ENST00000373377 SEC62Q99442 399 aaKnown RBP11.52□□□□□ -0.57
CSMD2-203ENST00000373377 MAP3K5Q99683 1374 aa11.52□□□□□ -0.57
CSMD2-203ENST00000373377 SKILP12757 684 aa11.52□□□□□ -0.57
CSMD2-203ENST00000373377 SLFNL1Q499Z3 407 aa11.52□□□□□ -0.57
CSMD2-203ENST00000373377 ISM2Q6H9L7 571 aa11.52□□□□□ -0.57
CSMD2-203ENST00000373377 C11orf57Q6ZUT1 292 aaPredicted RBP11.52□□□□□ -0.57
CSMD2-203ENST00000373377 COL18A1P39060 1754 aa11.51□□□□□ -0.57
CSMD2-203ENST00000373377 ZNF530Q6P9A1 599 aaPredicted RBP11.51□□□□□ -0.57
CSMD2-203ENST00000373377 TRERF1Q96PN7 1200 aa11.51□□□□□ -0.57
CSMD2-203ENST00000373377 GTPBP4Q9BZE4 634 aaKnown RBP11.51□□□□□ -0.57
CSMD2-203ENST00000373377 PTPN14Q15678 1187 aa11.51□□□□□ -0.57
CSMD2-203ENST00000373377 BICC1Q9H694 974 aaKnown RBP11.51□□□□□ -0.57
CSMD2-203ENST00000373377 ZNF215Q9UL58 517 aaPredicted RBP11.51□□□□□ -0.57
CSMD2-203ENST00000373377 BIN1O00499 593 aa11.5□□□□□ -0.57
CSMD2-203ENST00000373377 ZBTB22O15209 634 aa11.5□□□□□ -0.57
CSMD2-203ENST00000373377 ME1P48163 572 aa11.5□□□□□ -0.57
CSMD2-203ENST00000373377 Q6ZUG5 572 aa11.5□□□□□ -0.57
CSMD2-203ENST00000373377 RAB11FIP4Q86YS3 637 aa11.5□□□□□ -0.57
CSMD2-203ENST00000373377 TTC41PQ6P2S7 1318 aa11.5□□□□□ -0.57
CSMD2-203ENST00000373377 NPHP3Q7Z494 1330 aa11.5□□□□□ -0.57
CSMD2-203ENST00000373377 SMTNL1A8MU46 457 aa11.5□□□□□ -0.57
CSMD2-203ENST00000373377 EIF4A1P60842 406 aaKnown RBP11.5□□□□□ -0.57
CSMD2-203ENST00000373377 ZRSR1Q15695 479 aaKnown RBP11.5□□□□□ -0.57
CSMD2-203ENST00000373377 UTP14CQ5TAP6 766 aaKnown RBP11.5□□□□□ -0.57
CSMD2-203ENST00000373377 ANKRD7Q92527 254 aa11.5□□□□□ -0.57
CSMD2-203ENST00000373377 CLSTN2Q9H4D0 955 aa11.5□□□□□ -0.57
CSMD2-203ENST00000373377 DDX19AQ9NUU7 478 aaKnown RBP11.5□□□□□ -0.57
CSMD2-203ENST00000373377 TOB2Q14106 344 aaPredicted RBP11.5□□□□□ -0.57
CSMD2-203ENST00000373377 ELF2Q15723 593 aa11.5□□□□□ -0.57
CSMD2-203ENST00000373377 CCAR1Q8IX12 1150 aaKnown RBP11.5□□□□□ -0.57
CSMD2-203ENST00000373377 SUCLG2Q96I99 432 aa11.5□□□□□ -0.57
CSMD2-203ENST00000373377 ST7Q9NRC1 585 aa11.5□□□□□ -0.57
CSMD2-203ENST00000373377 SASH1O94885 1247 aa11.49□□□□□ -0.57
CSMD2-203ENST00000373377 RPS6KB1P23443 525 aa11.49□□□□□ -0.57
CSMD2-203ENST00000373377 DDX46Q7L014 1031 aaKnown RBP11.49□□□□□ -0.57
CSMD2-203ENST00000373377 RIC3Q7Z5B4 369 aa11.49□□□□□ -0.57
CSMD2-203ENST00000373377 NCOA5Q9HCD5 579 aaKnown RBP11.49□□□□□ -0.57
CSMD2-203ENST00000373377 CCDC69A6NI79 296 aa11.49□□□□□ -0.57
CSMD2-203ENST00000373377 SMC2O95347 1197 aa11.49□□□□□ -0.57
CSMD2-203ENST00000373377 PTPN21Q16825 1174 aa11.49□□□□□ -0.57
CSMD2-203ENST00000373377 MAP4K1Q92918 833 aa11.49□□□□□ -0.57
CSMD2-203ENST00000373377 SDF4Q9BRK5 362 aa11.49□□□□□ -0.57
CSMD2-203ENST00000373377 NBPF6Q5VWK0 638 aa11.48□□□□□ -0.57
CSMD2-203ENST00000373377 CCDC73Q6ZRK6 1079 aa11.48□□□□□ -0.57
CSMD2-203ENST00000373377 AOPEPQ8N6M6 819 aa11.48□□□□□ -0.57
CSMD2-203ENST00000373377 NBPF4Q96M43 638 aa11.48□□□□□ -0.57
CSMD2-203ENST00000373377 CTIFO43310 598 aaKnown RBP11.48□□□□□ -0.57
CSMD2-203ENST00000373377 KINO60870 393 aaKnown RBP11.48□□□□□ -0.57
CSMD2-203ENST00000373377 FAM177A1Q8N128 213 aaPredicted RBP11.48□□□□□ -0.57
CSMD2-203ENST00000373377 OGFRQ9NZT2 677 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms