RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 KIAA1551Q9HCM1 1747 aa12.09□□□□□ -0.47
ITM2A-201ENST00000373298 RGL2O15211 777 aa12.09□□□□□ -0.47
ITM2A-201ENST00000373298 HCLS1P14317 486 aaPredicted RBP12.09□□□□□ -0.47
ITM2A-201ENST00000373298 POLD1P28340 1107 aa12.09□□□□□ -0.47
ITM2A-201ENST00000373298 TRIM28Q13263 835 aaKnown RBP12.09□□□□□ -0.47
ITM2A-201ENST00000373298 ATF7IPQ6VMQ6 1270 aa12.09□□□□□ -0.47
ITM2A-201ENST00000373298 KLHL34Q8N239 644 aa12.09□□□□□ -0.47
ITM2A-201ENST00000373298 PANK1Q8TE04 598 aa12.09□□□□□ -0.47
ITM2A-201ENST00000373298 PPP1R1BQ9UD71 204 aaPredicted RBP12.09□□□□□ -0.47
ITM2A-201ENST00000373298 LRP5O75197 1615 aa12.09□□□□□ -0.47
ITM2A-201ENST00000373298 N4BP2Q86UW6 1770 aaPredicted RBP12.09□□□□□ -0.47
ITM2A-201ENST00000373298 ABCC4O15439 1325 aa12.09□□□□□ -0.47
ITM2A-201ENST00000373298 KIF16BQ96L93 1317 aa12.09□□□□□ -0.47
ITM2A-201ENST00000373298 KIF13BQ9NQT8 1826 aa12.09□□□□□ -0.47
ITM2A-201ENST00000373298 TAF1P21675 1872 aa12.08□□□□□ -0.47
ITM2A-201ENST00000373298 GCKRQ14397 625 aa12.08□□□□□ -0.48
ITM2A-201ENST00000373298 ZKSCAN2Q63HK3 967 aa12.08□□□□□ -0.48
ITM2A-201ENST00000373298 SLC51AQ86UW1 340 aa12.08□□□□□ -0.48
ITM2A-201ENST00000373298 NLGN2Q8NFZ4 835 aa12.08□□□□□ -0.48
ITM2A-201ENST00000373298 WWC3Q9ULE0 1092 aa12.08□□□□□ -0.48
ITM2A-201ENST00000373298 COL4A1P02462 1669 aa12.08□□□□□ -0.48
ITM2A-201ENST00000373298 C10orf71Q711Q0 1435 aa12.08□□□□□ -0.48
ITM2A-201ENST00000373298 COL11A2P13942 1736 aaPredicted RBP12.08□□□□□ -0.48
ITM2A-201ENST00000373298 LAMB2P55268 1798 aa12.08□□□□□ -0.48
ITM2A-201ENST00000373298 HSP90AB3PQ58FF7 597 aa12.08□□□□□ -0.48
ITM2A-201ENST00000373298 CNBD1Q8NA66 436 aa12.08□□□□□ -0.48
ITM2A-201ENST00000373298 LINS1Q8NG48 757 aa12.08□□□□□ -0.48
ITM2A-201ENST00000373298 ARHGAP45Q92619 1136 aa12.08□□□□□ -0.48
ITM2A-201ENST00000373298 FHDC1Q9C0D6 1143 aaPredicted RBP12.08□□□□□ -0.48
ITM2A-201ENST00000373298 TRMT112Q9UI30 125 aaKnown RBP12.08□□□□□ -0.48
ITM2A-201ENST00000373298 NBPF7P0C2Y1 421 aaPredicted RBP12.07□□□□□ -0.48
ITM2A-201ENST00000373298 CHRNA5P30532 468 aa12.07□□□□□ -0.48
ITM2A-201ENST00000373298 CASP7P55210 303 aa12.07□□□□□ -0.48
ITM2A-201ENST00000373298 NEXNQ0ZGT2 675 aa12.07□□□□□ -0.48
ITM2A-201ENST00000373298 PARP10Q53GL7 1025 aa12.07□□□□□ -0.48
ITM2A-201ENST00000373298 TMEM57Q8N5G2 664 aa12.07□□□□□ -0.48
ITM2A-201ENST00000373298 CCDC191Q8NCU4 936 aa12.07□□□□□ -0.48
ITM2A-201ENST00000373298 UTP14AQ9BVJ6 771 aaKnown RBP12.07□□□□□ -0.48
ITM2A-201ENST00000373298 API5Q9BZZ5 524 aaKnown RBP12.07□□□□□ -0.48
ITM2A-201ENST00000373298 CWC25Q9NXE8 425 aaPredicted RBP12.07□□□□□ -0.48
ITM2A-201ENST00000373298 TPTE2Q6XPS3 522 aa12.06□□□□□ -0.48
ITM2A-201ENST00000373298 UBE3BQ7Z3V4 1068 aa12.06□□□□□ -0.48
ITM2A-201ENST00000373298 SRCIN1Q9C0H9 1055 aa12.06□□□□□ -0.48
ITM2A-201ENST00000373298 SUPT16HQ9Y5B9 1047 aaKnown RBP12.06□□□□□ -0.48
ITM2A-201ENST00000373298 PXDNLA1KZ92 1463 aa12.05□□□□□ -0.48
ITM2A-201ENST00000373298 A0A0G2JLW4 131 aa12.05□□□□□ -0.48
ITM2A-201ENST00000373298 H7C1W4 665 aa12.05□□□□□ -0.48
ITM2A-201ENST00000373298 EPHA10Q5JZY3 1008 aa12.05□□□□□ -0.48
ITM2A-201ENST00000373298 PPP1R42Q7Z4L9 355 aa12.05□□□□□ -0.48
ITM2A-201ENST00000373298 ZBTB38Q8NAP3 1195 aaPredicted RBP12.05□□□□□ -0.48
ITM2A-201ENST00000373298 KAZALD1Q96I82 304 aa12.05□□□□□ -0.48
ITM2A-201ENST00000373298 USP44Q9H0E7 712 aa12.05□□□□□ -0.48
ITM2A-201ENST00000373298 OCEL1Q9H607 264 aa12.05□□□□□ -0.48
ITM2A-201ENST00000373298 IPO8O15397 1037 aaKnown RBP12.04□□□□□ -0.48
ITM2A-201ENST00000373298 PCCAP05165 728 aaPredicted RBP12.04□□□□□ -0.48
ITM2A-201ENST00000373298 KCNA3P22001 575 aa12.04□□□□□ -0.48
ITM2A-201ENST00000373298 GTF2E1P29083 439 aaPredicted RBP12.04□□□□□ -0.48
ITM2A-201ENST00000373298 RRP1P56182 461 aaKnown RBP12.04□□□□□ -0.48
ITM2A-201ENST00000373298 INTS3Q68E01 1043 aaKnown RBP12.04□□□□□ -0.48
ITM2A-201ENST00000373298 DZIP1LQ8IYY4 767 aaKnown RBP12.04□□□□□ -0.48
ITM2A-201ENST00000373298 CCDC85AQ96PX6 553 aaPredicted RBP12.04□□□□□ -0.48
ITM2A-201ENST00000373298 MEIS3Q99687 375 aa12.04□□□□□ -0.48
ITM2A-201ENST00000373298 SYT17Q9BSW7 474 aa12.04□□□□□ -0.48
ITM2A-201ENST00000373298 SH3TC1Q8TE82 1336 aa12.04□□□□□ -0.48
ITM2A-201ENST00000373298 CACNA1SQ13698 1873 aa12.04□□□□□ -0.48
ITM2A-201ENST00000373298 IRS4O14654 1257 aaPredicted RBP12.04□□□□□ -0.48
ITM2A-201ENST00000373298 NPHP1O15259 732 aa12.04□□□□□ -0.48
ITM2A-201ENST00000373298 DPEP1P16444 411 aa12.04□□□□□ -0.48
ITM2A-201ENST00000373298 SLC10A5Q5PT55 438 aa12.04□□□□□ -0.48
ITM2A-201ENST00000373298 COG6Q9Y2V7 657 aa12.04□□□□□ -0.48
ITM2A-201ENST00000373298 IBTKQ9P2D0 1353 aaPredicted RBP12.03□□□□□ -0.48
ITM2A-201ENST00000373298 GRM8O00222 908 aa12.03□□□□□ -0.48
ITM2A-201ENST00000373298 ALDH1L1O75891 902 aa12.03□□□□□ -0.48
ITM2A-201ENST00000373298 SUCLG2Q96I99 432 aa12.03□□□□□ -0.48
ITM2A-201ENST00000373298 BRIP1Q9BX63 1249 aa12.03□□□□□ -0.48
ITM2A-201ENST00000373298 NYXQ9GZU5 481 aa12.03□□□□□ -0.48
ITM2A-201ENST00000373298 RNF123Q5XPI4 1314 aa12.03□□□□□ -0.48
ITM2A-201ENST00000373298 BRCA1P38398 1863 aaKnown RBP12.03□□□□□ -0.48
ITM2A-201ENST00000373298 MYH3P11055 1940 aa12.03□□□□□ -0.48
ITM2A-201ENST00000373298 CCT4P50991 539 aaKnown RBP12.02□□□□□ -0.49
ITM2A-201ENST00000373298 ST5P78524 1137 aa12.02□□□□□ -0.49
ITM2A-201ENST00000373298 FTSJ3Q8IY81 847 aaKnown RBP12.02□□□□□ -0.49
ITM2A-201ENST00000373298 KLRG2A4D1S0 409 aaPredicted RBP12.01□□□□□ -0.49
ITM2A-201ENST00000373298 IRX6P78412 446 aaPredicted RBP12.01□□□□□ -0.49
ITM2A-201ENST00000373298 C2CD5Q86YS7 1000 aa12.01□□□□□ -0.49
ITM2A-201ENST00000373298 ITPRIPQ8IWB1 547 aa12.01□□□□□ -0.49
ITM2A-201ENST00000373298 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
ITM2A-201ENST00000373298 C9orf78Q9NZ63 289 aaPredicted RBP12.01□□□□□ -0.49
ITM2A-201ENST00000373298 CD2APQ9Y5K6 639 aa12.01□□□□□ -0.49
ITM2A-201ENST00000373298 UTYO14607 1347 aa12.01□□□□□ -0.49
ITM2A-201ENST00000373298 DLEC1Q9Y238 1755 aa12.01□□□□□ -0.49
ITM2A-201ENST00000373298 SRGNP10124 158 aa12□□□□□ -0.49
ITM2A-201ENST00000373298 FOXO4P98177 505 aa12□□□□□ -0.49
ITM2A-201ENST00000373298 CRY2Q49AN0 593 aa12□□□□□ -0.49
ITM2A-201ENST00000373298 SLX4Q8IY92 1834 aa12□□□□□ -0.49
ITM2A-201ENST00000373298 TMEM121BQ9BXQ6 578 aaPredicted RBP12□□□□□ -0.49
ITM2A-201ENST00000373298 CDHR2Q9BYE9 1310 aa12□□□□□ -0.49
ITM2A-201ENST00000373298 SEC31BQ9NQW1 1179 aa12□□□□□ -0.49
ITM2A-201ENST00000373298 ZBTB7BO15156 539 aaPredicted RBP12□□□□□ -0.49
ITM2A-201ENST00000373298 OLFM4Q6UX06 510 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms