RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 FAM184BQ9ULE4 1060 aa7.65□□□□□ -1.18
CHD6-203ENST00000373233 KIAA0232Q92628 1395 aa7.65□□□□□ -1.18
CHD6-203ENST00000373233 KRT24Q2M2I5 525 aa7.65□□□□□ -1.18
CHD6-203ENST00000373233 FAM177A1Q8N128 213 aaPredicted RBP7.65□□□□□ -1.18
CHD6-203ENST00000373233 ANO2Q9NQ90 1003 aa7.65□□□□□ -1.18
CHD6-203ENST00000373233 XRN1Q8IZH2 1706 aaKnown RBP7.65□□□□□ -1.18
CHD6-203ENST00000373233 IGSF1Q8N6C5 1336 aa7.65□□□□□ -1.18
CHD6-203ENST00000373233 PCDHB15Q9Y5E8 787 aa7.65□□□□□ -1.18
CHD6-203ENST00000373233 TNS3Q68CZ2 1445 aa7.65□□□□□ -1.19
CHD6-203ENST00000373233 ZCRB1Q8TBF4 217 aaKnown RBP7.65□□□□□ -1.19
CHD6-203ENST00000373233 PRM3Q9NNZ6 103 aa7.65□□□□□ -1.19
CHD6-203ENST00000373233 SOS1Q07889 1333 aaPredicted RBP7.65□□□□□ -1.19
CHD6-203ENST00000373233 K7ELQ4 463 aaPredicted RBP7.65□□□□□ -1.19
CHD6-203ENST00000373233 PTCD1O75127 700 aaKnown RBP7.65□□□□□ -1.19
CHD6-203ENST00000373233 GOLGA6L9A6NEM1 432 aa7.65□□□□□ -1.19
CHD6-203ENST00000373233 CAPN2P17655 700 aa7.65□□□□□ -1.19
CHD6-203ENST00000373233 PDCP20941 246 aa7.65□□□□□ -1.19
CHD6-203ENST00000373233 SFPQP23246 707 aaKnown RBP eCLIP7.65□□□□□ -1.192e-6■■■□□ 15.2
CHD6-203ENST00000373233 TAX1BP1Q86VP1 789 aa7.65□□□□□ -1.19
CHD6-203ENST00000373233 SRRTQ9BXP5 876 aaKnown RBP7.65□□□□□ -1.19
CHD6-203ENST00000373233 TOPAZ1Q8N9V7 1692 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 CCDC171Q6TFL3 1326 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 PPM1EQ8WY54 764 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 MYD88Q99836 296 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 SIL1Q9H173 461 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.64□□□□□ -1.19
CHD6-203ENST00000373233 COL3A1P02461 1466 aaPredicted RBP7.64□□□□□ -1.19
CHD6-203ENST00000373233 PNPLA6Q8IY17 1366 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 UBAP1LF5GYI3 381 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 RBBP5Q15291 538 aaKnown RBP7.64□□□□□ -1.19
CHD6-203ENST00000373233 USP31Q70CQ4 1352 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 STARD3NLO95772 234 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 SNRPA1P09661 255 aaKnown RBP7.64□□□□□ -1.19
CHD6-203ENST00000373233 ZNF397Q8NF99 534 aaPredicted RBP7.64□□□□□ -1.19
CHD6-203ENST00000373233 ZKSCAN1P17029 563 aaPredicted RBP7.64□□□□□ -1.19
CHD6-203ENST00000373233 BABAM1Q9NWV8 329 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 OVOS2A0A0J9YW53 1432 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 OVOS2Q6IE36 1432 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 LRRFIP1Q32MZ4 808 aaKnown RBP7.64□□□□□ -1.19
CHD6-203ENST00000373233 SEPT14Q6ZU15 432 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 AACSQ86V21 672 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 ADAMTSL3P82987 1691 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 NUCB1Q02818 461 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 PAF1Q8N7H5 531 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 PAXBP1Q9Y5B6 917 aa7.64□□□□□ -1.19
CHD6-203ENST00000373233 CFAP45Q9UL16 551 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 GCKP35557 465 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 AKAP17AQ02040 695 aaKnown RBP7.63□□□□□ -1.19
CHD6-203ENST00000373233 CEP57L1Q8IYX8 460 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 ANXA1P04083 346 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 CEP112Q8N8E3 955 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 SMARCE1Q969G3 411 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 DCAF5Q96JK2 942 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 EXOC6BQ9Y2D4 811 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 SLC39A6Q13433 755 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 NGLY1Q96IV0 654 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 FSD1Q9BTV5 496 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 NALCNQ8IZF0 1738 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 TOM1O60784 492 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 RAB11FIP3O75154 756 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 MCM3P25205 808 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 TERF1P54274 439 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 GTF3C6Q969F1 213 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 DBN1Q16643 649 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 NEUROD6Q96NK8 337 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 C1orf167Q5SNV9 1468 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 CEP83Q9Y592 693 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 CEP135Q66GS9 1140 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 KRBA2Q6ZNG9 492 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 SDF4Q9BRK5 362 aa7.63□□□□□ -1.19
CHD6-203ENST00000373233 NRKQ7Z2Y5 1582 aa7.62□□□□□ -1.19
CHD6-203ENST00000373233 PI4KAP2A4QPH2 592 aa7.62□□□□□ -1.19
CHD6-203ENST00000373233 EXOC5O00471 708 aa7.62□□□□□ -1.19
CHD6-203ENST00000373233 CCDC121Q6ZUS5 278 aa7.62□□□□□ -1.19
CHD6-203ENST00000373233 PI4KAP1Q8N8J0 262 aa7.62□□□□□ -1.19
CHD6-203ENST00000373233 WDR33Q9C0J8 1336 aaKnown RBP7.62□□□□□ -1.19
CHD6-203ENST00000373233 CCDC175P0C221 793 aa7.62□□□□□ -1.19
CHD6-203ENST00000373233 MX1P20591 662 aa7.62□□□□□ -1.19
CHD6-203ENST00000373233 CEP63Q96MT8 703 aa7.62□□□□□ -1.19
CHD6-203ENST00000373233 CLIP2Q9UDT6 1046 aa7.62□□□□□ -1.19
CHD6-203ENST00000373233 VIRMAQ69YN4 1812 aaKnown RBP7.62□□□□□ -1.19
CHD6-203ENST00000373233 KDM2BQ8NHM5 1336 aa7.62□□□□□ -1.19
CHD6-203ENST00000373233 ZBTB40Q9NUA8 1239 aa7.62□□□□□ -1.19
CHD6-203ENST00000373233 V9GYY5 206 aaPredicted RBP7.62□□□□□ -1.19
CHD6-203ENST00000373233 KIF4AO95239 1232 aa7.62□□□□□ -1.19
CHD6-203ENST00000373233 XAGE3Q8WTP9 111 aa7.62□□□□□ -1.19
CHD6-203ENST00000373233 LGR6Q9HBX8 967 aa7.62□□□□□ -1.19
CHD6-203ENST00000373233 SPATS2LQ9NUQ6 558 aaKnown RBP7.62□□□□□ -1.19
CHD6-203ENST00000373233 SYCP1Q15431 976 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 TCHPQ9BT92 498 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 MAP4K4O95819 1239 aaPredicted RBP7.61□□□□□ -1.19
CHD6-203ENST00000373233 FOSBP53539 338 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 ZNF335Q9H4Z2 1342 aaPredicted RBP7.61□□□□□ -1.19
CHD6-203ENST00000373233 CBFA2T2O43439 604 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 NUTM1Q86Y26 1132 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 NFATC2IPQ8NCF5 419 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 MEIS3Q99687 375 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 HIP1O00291 1037 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 EBAG9O00559 213 aa7.61□□□□□ -1.19
CHD6-203ENST00000373233 HOXB7P09629 217 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms