RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 SH2B1Q9NRF2 756 aaPredicted RBP21.47■■□□□ 1.03
MMP9-201ENST00000372330 SOS1Q07889 1333 aaPredicted RBP21.47■■□□□ 1.03
MMP9-201ENST00000372330 NPHP3Q7Z494 1330 aa21.47■■□□□ 1.03
MMP9-201ENST00000372330 GSDMDP57764 484 aa21.47■■□□□ 1.03
MMP9-201ENST00000372330 CCZ1BP86790 482 aa21.47■■□□□ 1.03
MMP9-201ENST00000372330 CCZ1P86791 482 aaPredicted RBP21.47■■□□□ 1.03
MMP9-201ENST00000372330 IL17REQ8NFR9 667 aa21.47■■□□□ 1.03
MMP9-201ENST00000372330 PSD3Q9NYI0 1048 aa21.47■■□□□ 1.03
MMP9-201ENST00000372330 AOX1Q06278 1338 aa21.47■■□□□ 1.03
MMP9-201ENST00000372330 NPHP4O75161 1426 aaPredicted RBP21.47■■□□□ 1.03
MMP9-201ENST00000372330 CCDC69A6NI79 296 aa21.46■■□□□ 1.03
MMP9-201ENST00000372330 ARHGAP29Q52LW3 1261 aa21.46■■□□□ 1.03
MMP9-201ENST00000372330 NOM1Q5C9Z4 860 aaKnown RBP21.46■■□□□ 1.03
MMP9-201ENST00000372330 C10orf67Q8IYJ2 551 aa21.46■■□□□ 1.03
MMP9-201ENST00000372330 NFATC2IPQ8NCF5 419 aa21.46■■□□□ 1.03
MMP9-201ENST00000372330 CCDC191Q8NCU4 936 aa21.46■■□□□ 1.03
MMP9-201ENST00000372330 AK7Q96M32 723 aa21.46■■□□□ 1.03
MMP9-201ENST00000372330 BABAM1Q9NWV8 329 aa21.46■■□□□ 1.03
MMP9-201ENST00000372330 SNX14Q9Y5W7 946 aa21.46■■□□□ 1.03
MMP9-201ENST00000372330 TUBGCP6Q96RT7 1819 aa21.46■■□□□ 1.03
MMP9-201ENST00000372330 NPHP1O15259 732 aa21.46■■□□□ 1.03
MMP9-201ENST00000372330 GNAI2P04899 355 aa21.46■■□□□ 1.03
MMP9-201ENST00000372330 SNW1Q13573 536 aaKnown RBP21.46■■□□□ 1.03
MMP9-201ENST00000372330 DHX8Q14562 1220 aaKnown RBP21.45■■□□□ 1.02
MMP9-201ENST00000372330 USHBP1Q8N6Y0 703 aa21.45■■□□□ 1.02
MMP9-201ENST00000372330 FBXO18Q8NFZ0 1043 aa21.45■■□□□ 1.02
MMP9-201ENST00000372330 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.45■■□□□ 1.02
MMP9-201ENST00000372330 TAF7Q15545 349 aaPredicted RBP21.45■■□□□ 1.02
MMP9-201ENST00000372330 TRMT1Q9NXH9 659 aaKnown RBP21.45■■□□□ 1.02
MMP9-201ENST00000372330 PHF8Q9UPP1 1060 aa21.45■■□□□ 1.02
MMP9-201ENST00000372330 POLR3GO15318 223 aaPredicted RBP21.44■■□□□ 1.02
MMP9-201ENST00000372330 SRLQ86TD4 932 aa21.44■■□□□ 1.02
MMP9-201ENST00000372330 IQUBQ8NA54 791 aa21.44■■□□□ 1.02
MMP9-201ENST00000372330 UBXN4Q92575 508 aa21.44■■□□□ 1.02
MMP9-201ENST00000372330 SMARCE1Q969G3 411 aa21.44■■□□□ 1.02
MMP9-201ENST00000372330 SRRTQ9BXP5 876 aaKnown RBP21.44■■□□□ 1.02
MMP9-201ENST00000372330 KCNJ6P48051 423 aa21.44■■□□□ 1.02
MMP9-201ENST00000372330 DNAJC25Q9H1X3 360 aa21.44■■□□□ 1.02
MMP9-201ENST00000372330 ATG3Q9NT62 314 aa21.44■■□□□ 1.02
MMP9-201ENST00000372330 FAM208AQ9UK61 1670 aaKnown RBP21.44■■□□□ 1.02
MMP9-201ENST00000372330 PDCP20941 246 aa21.43■■□□□ 1.02
MMP9-201ENST00000372330 C14orf37Q86TY3 774 aa21.43■■□□□ 1.02
MMP9-201ENST00000372330 NECTIN2Q92692 538 aa21.43■■□□□ 1.02
MMP9-201ENST00000372330 MYCBPQ99417 103 aaPredicted RBP21.43■■□□□ 1.02
MMP9-201ENST00000372330 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.43■■□□□ 1.02
MMP9-201ENST00000372330 VPS37CA5D8V6 355 aaPredicted RBP21.43■■□□□ 1.02
MMP9-201ENST00000372330 PSDA5PKW4 1024 aaPredicted RBP21.43■■□□□ 1.02
MMP9-201ENST00000372330 GNAI3P08754 354 aa21.43■■□□□ 1.02
MMP9-201ENST00000372330 GUCY2CP25092 1073 aa21.43■■□□□ 1.02
MMP9-201ENST00000372330 EXOC4Q96A65 974 aa21.43■■□□□ 1.02
MMP9-201ENST00000372330 HYPKQ9NX55 129 aa21.43■■□□□ 1.02
MMP9-201ENST00000372330 IQCB1Q15051 598 aa21.42■■□□□ 1.02
MMP9-201ENST00000372330 AXDND1Q5T1B0 1012 aaPredicted RBP21.42■■□□□ 1.02
MMP9-201ENST00000372330 NCAPGQ9BPX3 1015 aa21.42■■□□□ 1.02
MMP9-201ENST00000372330 ORC3Q9UBD5 711 aaPredicted RBP21.42■■□□□ 1.02
MMP9-201ENST00000372330 VPS53Q5VIR6 699 aa21.41■■□□□ 1.02
MMP9-201ENST00000372330 IMPACTQ9P2X3 320 aa21.41■■□□□ 1.02
MMP9-201ENST00000372330 CHMP3Q9Y3E7 222 aa21.41■■□□□ 1.02
MMP9-201ENST00000372330 ADGRL3Q9HAR2 1447 aa21.41■■□□□ 1.02
MMP9-201ENST00000372330 A0A1B0GUL7 405 aa21.41■■□□□ 1.02
MMP9-201ENST00000372330 CLGNO14967 610 aa21.41■■□□□ 1.02
MMP9-201ENST00000372330 CASTP20810 708 aaKnown RBP21.41■■□□□ 1.02
MMP9-201ENST00000372330 ST5P78524 1137 aa21.41■■□□□ 1.02
MMP9-201ENST00000372330 TSHZ3Q63HK5 1081 aa21.41■■□□□ 1.02
MMP9-201ENST00000372330 TRIM66O15016 1216 aa21.4■■□□□ 1.02
MMP9-201ENST00000372330 ARID5BQ14865 1188 aa21.4■■□□□ 1.02
MMP9-201ENST00000372330 CCDC83Q8IWF9 413 aa21.4■■□□□ 1.02
MMP9-201ENST00000372330 ESCO1Q5FWF5 840 aa21.4■■□□□ 1.02
MMP9-201ENST00000372330 IP6K1Q92551 441 aa21.4■■□□□ 1.02
MMP9-201ENST00000372330 RRP15Q9Y3B9 282 aaKnown RBP21.4■■□□□ 1.02
MMP9-201ENST00000372330 SGSM2O43147 1006 aa21.39■■□□□ 1.02
MMP9-201ENST00000372330 LARP1BQ659C4 914 aaKnown RBP21.39■■□□□ 1.02
MMP9-201ENST00000372330 SPATA32Q96LK8 384 aa21.39■■□□□ 1.02
MMP9-201ENST00000372330 OSBPL5Q9H0X9 879 aaPredicted RBP21.39■■□□□ 1.02
MMP9-201ENST00000372330 EXOC6BQ9Y2D4 811 aa21.39■■□□□ 1.02
MMP9-201ENST00000372330 CACNA1FO60840 1977 aa21.39■■□□□ 1.01
MMP9-201ENST00000372330 IVLP07476 585 aa21.39■■□□□ 1.01
MMP9-201ENST00000372330 PSEN1P49768 467 aa21.39■■□□□ 1.01
MMP9-201ENST00000372330 CCDC158Q5M9N0 1113 aa21.39■■□□□ 1.01
MMP9-201ENST00000372330 NRDCO43847 1150 aa21.38■■□□□ 1.01
MMP9-201ENST00000372330 OAS2P29728 719 aaKnown RBP21.38■■□□□ 1.01
MMP9-201ENST00000372330 SMC1AQ14683 1233 aaKnown RBP21.38■■□□□ 1.01
MMP9-201ENST00000372330 LCMT1Q9UIC8 334 aa21.38■■□□□ 1.01
MMP9-201ENST00000372330 PXDNLA1KZ92 1463 aa21.38■■□□□ 1.01
MMP9-201ENST00000372330 LTN1O94822 1766 aa21.38■■□□□ 1.01
MMP9-201ENST00000372330 EFCAB8A8MWE9 144 aa21.38■■□□□ 1.01
MMP9-201ENST00000372330 CTAGE5O15320 804 aa21.38■■□□□ 1.01
MMP9-201ENST00000372330 CCP110O43303 1012 aa21.38■■□□□ 1.01
MMP9-201ENST00000372330 ATP8B2P98198 1209 aa21.38■■□□□ 1.01
MMP9-201ENST00000372330 TM6SF1Q9BZW5 370 aa21.38■■□□□ 1.01
MMP9-201ENST00000372330 CEMIPQ8WUJ3 1361 aa21.37■■□□□ 1.01
MMP9-201ENST00000372330 PNMA6EA0A0J9YXQ4 647 aa21.37■■□□□ 1.01
MMP9-201ENST00000372330 ZBTB9Q96C00 473 aa21.37■■□□□ 1.01
MMP9-201ENST00000372330 JRKLQ9Y4A0 524 aa21.37■■□□□ 1.01
MMP9-201ENST00000372330 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
MMP9-201ENST00000372330 PHLPP2Q6ZVD8 1323 aa21.37■■□□□ 1.01
MMP9-201ENST00000372330 BECN2A8MW95 431 aa21.37■■□□□ 1.01
MMP9-201ENST00000372330 ACTN2P35609 894 aa21.37■■□□□ 1.01
MMP9-201ENST00000372330 HDGFL1Q5TGJ6 251 aa21.37■■□□□ 1.01
MMP9-201ENST00000372330 PPP1R13BQ96KQ4 1090 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms