RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
PTCH2-201ENST00000372192 IMMTQ16891 758 aaKnown RBP13.31□□□□□ -0.28
PTCH2-201ENST00000372192 AOPEPQ8N6M6 819 aa13.31□□□□□ -0.28
PTCH2-201ENST00000372192 IL17REQ8NFR9 667 aa13.31□□□□□ -0.28
PTCH2-201ENST00000372192 YEATS2Q9ULM3 1422 aa13.31□□□□□ -0.28
PTCH2-201ENST00000372192 URI1O94763 535 aaPredicted RBP13.31□□□□□ -0.28
PTCH2-201ENST00000372192 AKAP4Q5JQC9 854 aa13.31□□□□□ -0.28
PTCH2-201ENST00000372192 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTCH2-201ENST00000372192 V9GYY5 206 aaPredicted RBP13.31□□□□□ -0.28
PTCH2-201ENST00000372192 BIN1O00499 593 aa13.31□□□□□ -0.28
PTCH2-201ENST00000372192 TSR1Q2NL82 804 aaKnown RBP13.31□□□□□ -0.28
PTCH2-201ENST00000372192 ADCK5Q3MIX3 580 aa13.31□□□□□ -0.28
PTCH2-201ENST00000372192 MCMDC2Q4G0Z9 681 aa13.31□□□□□ -0.28
PTCH2-201ENST00000372192 ANKRD20A12PQ8NF67 263 aa13.31□□□□□ -0.28
PTCH2-201ENST00000372192 MRPS27Q92552 414 aaKnown RBP13.31□□□□□ -0.28
PTCH2-201ENST00000372192 TPCN1Q9ULQ1 816 aa13.31□□□□□ -0.28
PTCH2-201ENST00000372192 ZSCAN12O43309 604 aa13.31□□□□□ -0.28
PTCH2-201ENST00000372192 TTC39AQ5SRH9 613 aa13.31□□□□□ -0.28
PTCH2-201ENST00000372192 ZSCAN25Q6NSZ9 544 aa13.31□□□□□ -0.28
PTCH2-201ENST00000372192 PTPRMP28827 1452 aa13.3□□□□□ -0.28
PTCH2-201ENST00000372192 DDX46Q7L014 1031 aaKnown RBP13.3□□□□□ -0.28
PTCH2-201ENST00000372192 CWC15Q9P013 229 aaKnown RBP13.3□□□□□ -0.28
PTCH2-201ENST00000372192 CEP126Q9P2H0 1117 aa13.3□□□□□ -0.28
PTCH2-201ENST00000372192 ABCA9Q8IUA7 1624 aa13.3□□□□□ -0.28
PTCH2-201ENST00000372192 METP08581 1390 aa13.3□□□□□ -0.28
PTCH2-201ENST00000372192 PPFIA3O75145 1194 aa13.3□□□□□ -0.28
PTCH2-201ENST00000372192 CDKL5O76039 1030 aa13.3□□□□□ -0.28
PTCH2-201ENST00000372192 LRMPQ12912 555 aa13.3□□□□□ -0.28
PTCH2-201ENST00000372192 HSP90B2PQ58FF3 399 aa13.3□□□□□ -0.28
PTCH2-201ENST00000372192 ZC3H13Q5T200 1668 aaKnown RBP13.3□□□□□ -0.28
PTCH2-201ENST00000372192 CALCOCO1Q9P1Z2 691 aa13.3□□□□□ -0.28
PTCH2-201ENST00000372192 ELP1O95163 1332 aa13.29□□□□□ -0.28
PTCH2-201ENST00000372192 PES1O00541 588 aaKnown RBP13.29□□□□□ -0.28
PTCH2-201ENST00000372192 IFIT1P09914 478 aaKnown RBP13.29□□□□□ -0.28
PTCH2-201ENST00000372192 RASSF8Q8NHQ8 419 aa13.29□□□□□ -0.28
PTCH2-201ENST00000372192 PI4K2BQ8TCG2 481 aa13.29□□□□□ -0.28
PTCH2-201ENST00000372192 DACH1Q9UI36 760 aa13.29□□□□□ -0.28
PTCH2-201ENST00000372192 ARHGEF40Q8TER5 1519 aa13.29□□□□□ -0.28
PTCH2-201ENST00000372192 A0A087WZG4 1122 aa13.29□□□□□ -0.28
PTCH2-201ENST00000372192 GOLIM4O00461 696 aa13.29□□□□□ -0.28
PTCH2-201ENST00000372192 TOP1P11387 765 aaKnown RBP13.29□□□□□ -0.28
PTCH2-201ENST00000372192 NEXMIFQ5QGS0 1516 aa13.29□□□□□ -0.28
PTCH2-201ENST00000372192 DMTNQ08495 405 aa13.29□□□□□ -0.28
PTCH2-201ENST00000372192 UBE3BQ7Z3V4 1068 aa13.29□□□□□ -0.28
PTCH2-201ENST00000372192 BICC1Q9H694 974 aaKnown RBP13.29□□□□□ -0.28
PTCH2-201ENST00000372192 MRVI1Q9Y6F6 885 aa13.29□□□□□ -0.28
PTCH2-201ENST00000372192 ERICH2A1L162 156 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 POLR3DP05423 398 aaPredicted RBP13.28□□□□□ -0.28
PTCH2-201ENST00000372192 BEND3Q5T5X7 828 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 ATL3Q6DD88 541 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 ERO1AQ96HE7 468 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 ACBD3Q9H3P7 528 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 MROH2AA6NES4 1674 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 LARGE1O95461 756 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 EIF4A1P60842 406 aaKnown RBP13.28□□□□□ -0.28
PTCH2-201ENST00000372192 UTP14CQ5TAP6 766 aaKnown RBP13.28□□□□□ -0.28
PTCH2-201ENST00000372192 KCNG4Q8TDN1 519 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 AK7Q96M32 723 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTCH2-201ENST00000372192 PTPDC1A2A3K4 754 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 TUBB4AP04350 444 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 DHX32Q7L7V1 743 aaKnown RBP13.28□□□□□ -0.28
PTCH2-201ENST00000372192 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.28□□□□□ -0.28
PTCH2-201ENST00000372192 IGSF1Q8N6C5 1336 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 PRR36Q9H6K5 1346 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 FAM160A1Q05DH4 1040 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 GABPB1Q06547 395 aaPredicted RBP13.28□□□□□ -0.28
PTCH2-201ENST00000372192 NOL10Q9BSC4 688 aaKnown RBP13.28□□□□□ -0.28
PTCH2-201ENST00000372192 SPTLC3Q9NUV7 552 aa13.28□□□□□ -0.28
PTCH2-201ENST00000372192 ORC3Q9UBD5 711 aaPredicted RBP13.28□□□□□ -0.28
PTCH2-201ENST00000372192 NR1I2O75469 434 aa13.27□□□□□ -0.28
PTCH2-201ENST00000372192 ATP2B1P20020 1258 aa13.27□□□□□ -0.28
PTCH2-201ENST00000372192 TTC14Q96N46 770 aa13.27□□□□□ -0.28
PTCH2-201ENST00000372192 USP16Q9Y5T5 823 aa13.27□□□□□ -0.28
PTCH2-201ENST00000372192 GOLGA8BA8MQT2 603 aa13.27□□□□□ -0.29
PTCH2-201ENST00000372192 FILIP1LQ4L180 1135 aa13.27□□□□□ -0.29
PTCH2-201ENST00000372192 ALKQ9UM73 1620 aa13.27□□□□□ -0.29
PTCH2-201ENST00000372192 JAK2O60674 1132 aa13.27□□□□□ -0.29
PTCH2-201ENST00000372192 CCDC57Q2TAC2 916 aa13.27□□□□□ -0.29
PTCH2-201ENST00000372192 MAP4K1Q92918 833 aa13.27□□□□□ -0.29
PTCH2-201ENST00000372192 LLPHQ9BRT6 129 aaKnown RBP13.27□□□□□ -0.29
PTCH2-201ENST00000372192 LGR6Q9HBX8 967 aa13.27□□□□□ -0.29
PTCH2-201ENST00000372192 TBC1D2BQ9UPU7 963 aa13.27□□□□□ -0.29
PTCH2-201ENST00000372192 POLA2Q14181 598 aa13.26□□□□□ -0.29
PTCH2-201ENST00000372192 ANKRD13DQ6ZTN6 518 aa13.26□□□□□ -0.29
PTCH2-201ENST00000372192 CAMSAP1Q5T5Y3 1602 aa13.26□□□□□ -0.29
PTCH2-201ENST00000372192 IPO7O95373 1038 aaKnown RBP13.26□□□□□ -0.29
PTCH2-201ENST00000372192 CABP4P57796 275 aa13.26□□□□□ -0.29
PTCH2-201ENST00000372192 PPFIBP1Q86W92 1011 aa13.26□□□□□ -0.29
PTCH2-201ENST00000372192 AK9Q5TCS8 1911 aa13.26□□□□□ -0.29
PTCH2-201ENST00000372192 APOBRQ0VD83 1088 aa13.26□□□□□ -0.29
PTCH2-201ENST00000372192 SART3Q15020 963 aaKnown RBP13.26□□□□□ -0.29
PTCH2-201ENST00000372192 TDRD7Q8NHU6 1098 aaKnown RBP13.26□□□□□ -0.29
PTCH2-201ENST00000372192 XAGE3Q8WTP9 111 aa13.26□□□□□ -0.29
PTCH2-201ENST00000372192 JARID2Q92833 1246 aaPredicted RBP13.26□□□□□ -0.29
PTCH2-201ENST00000372192 DNAI1Q9UI46 699 aa13.26□□□□□ -0.29
PTCH2-201ENST00000372192 COPS6Q7L5N1 327 aa13.25□□□□□ -0.29
PTCH2-201ENST00000372192 GTF3C6Q969F1 213 aa13.25□□□□□ -0.29
PTCH2-201ENST00000372192 EAF2Q96CJ1 260 aaPredicted RBP13.25□□□□□ -0.29
PTCH2-201ENST00000372192 DDX21Q9NR30 783 aaKnown RBP eCLIP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms