RNA–Protein interactions for RNA: ENST00000371209.5

TCTN3-202, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 1,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-202ENST00000371209 ZBTB7AO95365 584 aa13.15□□□□□ -0.3
TCTN3-202ENST00000371209 MMP10P09238 476 aa13.15□□□□□ -0.3
TCTN3-202ENST00000371209 ERFEQ4G0M1 354 aa13.15□□□□□ -0.3
TCTN3-202ENST00000371209 EPHA10Q5JZY3 1008 aa13.15□□□□□ -0.3
TCTN3-202ENST00000371209 NBPF5PQ86XG9 351 aaPredicted RBP13.15□□□□□ -0.3
TCTN3-202ENST00000371209 ABCC12Q96J65 1359 aa13.15□□□□□ -0.31
TCTN3-202ENST00000371209 DDX60Q8IY21 1712 aaKnown RBP13.14□□□□□ -0.31
TCTN3-202ENST00000371209 NRXN2Q9P2S2 1712 aa13.14□□□□□ -0.31
TCTN3-202ENST00000371209 SH3TC1Q8TE82 1336 aa13.14□□□□□ -0.31
TCTN3-202ENST00000371209 CDHR2Q9BYE9 1310 aa13.14□□□□□ -0.31
TCTN3-202ENST00000371209 GNAI2P04899 355 aa13.14□□□□□ -0.31
TCTN3-202ENST00000371209 SERPINB2P05120 415 aa13.14□□□□□ -0.31
TCTN3-202ENST00000371209 CCDC24Q8N4L8 307 aa13.14□□□□□ -0.31
TCTN3-202ENST00000371209 CHMP4BQ9H444 224 aaKnown RBP13.14□□□□□ -0.31
TCTN3-202ENST00000371209 PCDHB15Q9Y5E8 787 aa13.14□□□□□ -0.31
TCTN3-202ENST00000371209 LAMB2P55268 1798 aa13.13□□□□□ -0.31
TCTN3-202ENST00000371209 IRS4O14654 1257 aaPredicted RBP13.13□□□□□ -0.31
TCTN3-202ENST00000371209 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
TCTN3-202ENST00000371209 HCLS1P14317 486 aaPredicted RBP13.13□□□□□ -0.31
TCTN3-202ENST00000371209 FOXO4P98177 505 aa13.13□□□□□ -0.31
TCTN3-202ENST00000371209 PRR5LQ6MZQ0 368 aa13.13□□□□□ -0.31
TCTN3-202ENST00000371209 PHF12Q96QT6 1004 aa13.13□□□□□ -0.31
TCTN3-202ENST00000371209 NYXQ9GZU5 481 aa13.13□□□□□ -0.31
TCTN3-202ENST00000371209 AAMPQ13685 434 aa13.12□□□□□ -0.31
TCTN3-202ENST00000371209 LHX8Q68G74 356 aa13.12□□□□□ -0.31
TCTN3-202ENST00000371209 TPTE2Q6XPS3 522 aa13.12□□□□□ -0.31
TCTN3-202ENST00000371209 ANKRD44Q8N8A2 993 aa13.12□□□□□ -0.31
TCTN3-202ENST00000371209 CNBD1Q8NA66 436 aa13.12□□□□□ -0.31
TCTN3-202ENST00000371209 BICC1Q9H694 974 aaKnown RBP13.12□□□□□ -0.31
TCTN3-202ENST00000371209 TNRC6CQ9HCJ0 1690 aaKnown RBP13.12□□□□□ -0.31
TCTN3-202ENST00000371209 SLC10A5Q5PT55 438 aa13.11□□□□□ -0.31
TCTN3-202ENST00000371209 CEP85Q6P2H3 762 aa13.11□□□□□ -0.31
TCTN3-202ENST00000371209 C3orf67Q6ZVT6 689 aa13.11□□□□□ -0.31
TCTN3-202ENST00000371209 SIRT2Q8IXJ6 389 aa13.11□□□□□ -0.31
TCTN3-202ENST00000371209 PLA2G12BQ9BX93 195 aa13.11□□□□□ -0.31
TCTN3-202ENST00000371209 MTFR1LQ9H019 292 aa13.11□□□□□ -0.31
TCTN3-202ENST00000371209 PARP3Q9Y6F1 533 aa13.11□□□□□ -0.31
TCTN3-202ENST00000371209 GTF2E1P29083 439 aaPredicted RBP13.1□□□□□ -0.31
TCTN3-202ENST00000371209 ERICH6BQ5W0A0 696 aa13.1□□□□□ -0.31
TCTN3-202ENST00000371209 PDE8AO60658 829 aa13.1□□□□□ -0.31
TCTN3-202ENST00000371209 RABL6Q3YEC7 729 aaPredicted RBP13.1□□□□□ -0.31
TCTN3-202ENST00000371209 RIC1Q4ADV7 1423 aa13.09□□□□□ -0.31
TCTN3-202ENST00000371209 ANKRD31Q8N7Z5 1873 aa13.09□□□□□ -0.31
TCTN3-202ENST00000371209 PNMA6EA0A0J9YXQ4 647 aa13.09□□□□□ -0.31
TCTN3-202ENST00000371209 NPHP1O15259 732 aa13.09□□□□□ -0.31
TCTN3-202ENST00000371209 CSF1RP07333 972 aa13.09□□□□□ -0.31
TCTN3-202ENST00000371209 CTSWP56202 376 aa13.09□□□□□ -0.31
TCTN3-202ENST00000371209 MTX1Q13505 466 aa13.09□□□□□ -0.31
TCTN3-202ENST00000371209 LMBR1LQ6UX01 489 aa13.09□□□□□ -0.31
TCTN3-202ENST00000371209 TTLL11Q8NHH1 800 aa13.09□□□□□ -0.31
TCTN3-202ENST00000371209 SGIP1Q9BQI5 828 aa13.09□□□□□ -0.31
TCTN3-202ENST00000371209 HDAC5Q9UQL6 1122 aa13.09□□□□□ -0.31
TCTN3-202ENST00000371209 MYH3P11055 1940 aa13.08□□□□□ -0.32
TCTN3-202ENST00000371209 ST5P78524 1137 aa13.08□□□□□ -0.32
TCTN3-202ENST00000371209 ATP8B2P98198 1209 aa13.08□□□□□ -0.32
TCTN3-202ENST00000371209 RPAP2Q8IXW5 612 aaPredicted RBP13.08□□□□□ -0.32
TCTN3-202ENST00000371209 DCBLD2Q96PD2 775 aa13.08□□□□□ -0.32
TCTN3-202ENST00000371209 CCDC85AQ96PX6 553 aaPredicted RBP13.08□□□□□ -0.32
TCTN3-202ENST00000371209 SRGAP3O43295 1099 aa13.07□□□□□ -0.32
TCTN3-202ENST00000371209 PTGER2P43116 358 aa13.07□□□□□ -0.32
TCTN3-202ENST00000371209 FAM161AQ3B820 660 aa13.07□□□□□ -0.32
TCTN3-202ENST00000371209 GREM2Q9H772 168 aa13.07□□□□□ -0.32
TCTN3-202ENST00000371209 COL4A1P02462 1669 aa13.07□□□□□ -0.32
TCTN3-202ENST00000371209 C10orf71Q711Q0 1435 aa13.06□□□□□ -0.32
TCTN3-202ENST00000371209 IGHDP01880 384 aa13.06□□□□□ -0.32
TCTN3-202ENST00000371209 HSP90B1P14625 803 aaKnown RBP13.06□□□□□ -0.32
TCTN3-202ENST00000371209 SF3B3Q15393 1217 aaKnown RBP13.06□□□□□ -0.32
TCTN3-202ENST00000371209 SSH3Q8TE77 659 aa13.06□□□□□ -0.32
TCTN3-202ENST00000371209 NLRP3Q96P20 1036 aa13.06□□□□□ -0.32
TCTN3-202ENST00000371209 PPP4R2Q9NY27 417 aa13.06□□□□□ -0.32
TCTN3-202ENST00000371209 COL11A2P13942 1736 aaPredicted RBP13.05□□□□□ -0.32
TCTN3-202ENST00000371209 KLRG2A4D1S0 409 aaPredicted RBP13.05□□□□□ -0.32
TCTN3-202ENST00000371209 POLD1P28340 1107 aa13.05□□□□□ -0.32
TCTN3-202ENST00000371209 RFX5P48382 616 aaPredicted RBP13.05□□□□□ -0.32
TCTN3-202ENST00000371209 HDAC1Q13547 482 aaPredicted RBP13.05□□□□□ -0.32
TCTN3-202ENST00000371209 B4GALNT3Q6L9W6 998 aa13.05□□□□□ -0.32
TCTN3-202ENST00000371209 BRIP1Q9BX63 1249 aa13.05□□□□□ -0.32
TCTN3-202ENST00000371209 CHMP3Q9Y3E7 222 aa13.05□□□□□ -0.32
TCTN3-202ENST00000371209 RTL9Q8NET4 1388 aa13.05□□□□□ -0.32
TCTN3-202ENST00000371209 CRY2Q49AN0 593 aa13.04□□□□□ -0.32
TCTN3-202ENST00000371209 CCDC152Q4G0S7 254 aa13.04□□□□□ -0.32
TCTN3-202ENST00000371209 KLHDC4Q8TBB5 520 aa13.04□□□□□ -0.32
TCTN3-202ENST00000371209 SEC31BQ9NQW1 1179 aa13.04□□□□□ -0.32
TCTN3-202ENST00000371209 ITGA6P23229 1130 aa13.04□□□□□ -0.32
TCTN3-202ENST00000371209 PTPN12Q05209 780 aaKnown RBP13.04□□□□□ -0.32
TCTN3-202ENST00000371209 ZNF594Q96JF6 807 aaPredicted RBP13.04□□□□□ -0.32
TCTN3-202ENST00000371209 CCDC136Q96JN2 1154 aa13.04□□□□□ -0.32
TCTN3-202ENST00000371209 PA2G4Q9UQ80 394 aaKnown RBP13.04□□□□□ -0.32
TCTN3-202ENST00000371209 KIF13BQ9NQT8 1826 aa13.03□□□□□ -0.32
TCTN3-202ENST00000371209 LRP5O75197 1615 aa13.03□□□□□ -0.32
TCTN3-202ENST00000371209 HMMRO75330 724 aa13.03□□□□□ -0.32
TCTN3-202ENST00000371209 IFIT5Q13325 482 aaKnown RBP13.03□□□□□ -0.32
TCTN3-202ENST00000371209 RWDD1Q9H446 243 aaPredicted RBP13.03□□□□□ -0.32
TCTN3-202ENST00000371209 SPON1Q9HCB6 807 aa13.03□□□□□ -0.32
TCTN3-202ENST00000371209 TAF1P21675 1872 aa13.03□□□□□ -0.32
TCTN3-202ENST00000371209 KIAA1551Q9HCM1 1747 aa13.02□□□□□ -0.32
TCTN3-202ENST00000371209 ANKRD18BA2A2Z9 1011 aa13.02□□□□□ -0.33
TCTN3-202ENST00000371209 PDE6BP35913 854 aa13.02□□□□□ -0.33
TCTN3-202ENST00000371209 CCDC57Q2TAC2 916 aa13.02□□□□□ -0.33
TCTN3-202ENST00000371209 COPRSQ9NQ92 184 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms