RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 NPM1P06748 294 aaKnown RBP eCLIP11.34□□□□□ -0.59
LRRC40-201ENST00000370952 H2AFXP16104 143 aaPredicted RBP11.34□□□□□ -0.59
LRRC40-201ENST00000370952 PSMA5P28066 241 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 E4F1Q66K89 784 aaPredicted RBP11.34□□□□□ -0.59
LRRC40-201ENST00000370952 AACSQ86V21 672 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 PI4KAP1Q8N8J0 262 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 NEK11Q8NG66 645 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.34□□□□□ -0.59
LRRC40-201ENST00000370952 ACEP12821 1306 aa11.33□□□□□ -0.6
LRRC40-201ENST00000370952 PLA2G4AP47712 749 aa11.33□□□□□ -0.6
LRRC40-201ENST00000370952 ARHGAP29Q52LW3 1261 aa11.33□□□□□ -0.6
LRRC40-201ENST00000370952 IL17REQ8NFR9 667 aa11.33□□□□□ -0.6
LRRC40-201ENST00000370952 IPO4Q8TEX9 1081 aaKnown RBP11.33□□□□□ -0.6
LRRC40-201ENST00000370952 TRIM34Q9BYJ4 488 aa11.33□□□□□ -0.6
LRRC40-201ENST00000370952 CEP170BQ9Y4F5 1589 aaPredicted RBP11.33□□□□□ -0.6
LRRC40-201ENST00000370952 PNMA6AP0CW24 399 aaPredicted RBP11.33□□□□□ -0.6
LRRC40-201ENST00000370952 CCDC8Q9H0W5 538 aaPredicted RBP11.33□□□□□ -0.6
LRRC40-201ENST00000370952 GNAT3A8MTJ3 354 aa11.32□□□□□ -0.6
LRRC40-201ENST00000370952 TULP2O00295 520 aa11.32□□□□□ -0.6
LRRC40-201ENST00000370952 NBPF11Q86T75 865 aa11.32□□□□□ -0.6
LRRC40-201ENST00000370952 EVI5LQ96CN4 794 aa11.32□□□□□ -0.6
LRRC40-201ENST00000370952 PPP1R13BQ96KQ4 1090 aa11.32□□□□□ -0.6
LRRC40-201ENST00000370952 LRRC2Q9BYS8 371 aa11.32□□□□□ -0.6
LRRC40-201ENST00000370952 USP42Q9H9J4 1324 aaKnown RBP11.32□□□□□ -0.6
LRRC40-201ENST00000370952 N4BP2Q86UW6 1770 aaPredicted RBP11.32□□□□□ -0.6
LRRC40-201ENST00000370952 OVOS2A0A0J9YW53 1432 aa11.32□□□□□ -0.6
LRRC40-201ENST00000370952 OVOS2Q6IE36 1432 aa11.32□□□□□ -0.6
LRRC40-201ENST00000370952 CAVIN2O95810 425 aa11.32□□□□□ -0.6
LRRC40-201ENST00000370952 HSP90B1P14625 803 aaKnown RBP11.32□□□□□ -0.6
LRRC40-201ENST00000370952 HSP90AB4PQ58FF6 505 aa11.32□□□□□ -0.6
LRRC40-201ENST00000370952 ZNF589Q86UQ0 364 aaPredicted RBP11.32□□□□□ -0.6
LRRC40-201ENST00000370952 DNAJC2Q99543 621 aaKnown RBP11.32□□□□□ -0.6
LRRC40-201ENST00000370952 BOLA2Q9H3K6 86 aa11.32□□□□□ -0.6
LRRC40-201ENST00000370952 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
LRRC40-201ENST00000370952 SEC31AO94979 1220 aaKnown RBP11.31□□□□□ -0.6
LRRC40-201ENST00000370952 ANKRD1Q15327 319 aa11.31□□□□□ -0.6
LRRC40-201ENST00000370952 TMC6Q7Z403 805 aa11.31□□□□□ -0.6
LRRC40-201ENST00000370952 FSD1Q9BTV5 496 aa11.31□□□□□ -0.6
LRRC40-201ENST00000370952 L2HGDHQ9H9P8 463 aa11.31□□□□□ -0.6
LRRC40-201ENST00000370952 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.31□□□□□ -0.6
LRRC40-201ENST00000370952 CHPF2Q9P2E5 772 aa11.31□□□□□ -0.6
LRRC40-201ENST00000370952 NPHP4O75161 1426 aaPredicted RBP11.31□□□□□ -0.6
LRRC40-201ENST00000370952 HTATSF1O43719 755 aaKnown RBP11.31□□□□□ -0.6
LRRC40-201ENST00000370952 SMC2O95347 1197 aa11.31□□□□□ -0.6
LRRC40-201ENST00000370952 AMPHP49418 695 aa11.31□□□□□ -0.6
LRRC40-201ENST00000370952 BEND3Q5T5X7 828 aa11.31□□□□□ -0.6
LRRC40-201ENST00000370952 DNAAF4Q8WXU2 420 aa11.31□□□□□ -0.6
LRRC40-201ENST00000370952 GPATCH3Q96I76 525 aa11.31□□□□□ -0.6
LRRC40-201ENST00000370952 FMNL2Q96PY5 1086 aa11.31□□□□□ -0.6
LRRC40-201ENST00000370952 CHMP4AQ9BY43 222 aa11.31□□□□□ -0.6
LRRC40-201ENST00000370952 EPC1Q9H2F5 836 aa11.31□□□□□ -0.6
LRRC40-201ENST00000370952 ADGRL3Q9HAR2 1447 aa11.31□□□□□ -0.6
LRRC40-201ENST00000370952 TLR7Q9NYK1 1049 aaKnown RBP11.31□□□□□ -0.6
LRRC40-201ENST00000370952 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.31□□□□□ -0.63e-6■■□□□ 12.6
LRRC40-201ENST00000370952 KINO60870 393 aaKnown RBP11.3□□□□□ -0.6
LRRC40-201ENST00000370952 RNF20Q5VTR2 975 aa11.3□□□□□ -0.6
LRRC40-201ENST00000370952 ARMCX5Q6P1M9 558 aa11.3□□□□□ -0.6
LRRC40-201ENST00000370952 CCDC73Q6ZRK6 1079 aa11.3□□□□□ -0.6
LRRC40-201ENST00000370952 HOMER1Q86YM7 354 aa11.3□□□□□ -0.6
LRRC40-201ENST00000370952 EDC3Q96F86 508 aaKnown RBP11.3□□□□□ -0.6
LRRC40-201ENST00000370952 LTV1Q96GA3 475 aaPredicted RBP11.3□□□□□ -0.6
LRRC40-201ENST00000370952 PDIA4P13667 645 aaKnown RBP11.3□□□□□ -0.6
LRRC40-201ENST00000370952 RAD51AP2Q09MP3 1159 aa11.3□□□□□ -0.6
LRRC40-201ENST00000370952 CEP57L1Q8IYX8 460 aa11.3□□□□□ -0.6
LRRC40-201ENST00000370952 USP28Q96RU2 1077 aa11.3□□□□□ -0.6
LRRC40-201ENST00000370952 XPO4Q9C0E2 1151 aaKnown RBP11.3□□□□□ -0.6
LRRC40-201ENST00000370952 ZCCHC17Q9NP64 241 aaKnown RBP11.3□□□□□ -0.6
LRRC40-201ENST00000370952 ANO10Q9NW15 660 aa11.3□□□□□ -0.6
LRRC40-201ENST00000370952 CFAP45Q9UL16 551 aa11.3□□□□□ -0.6
LRRC40-201ENST00000370952 KIF2AO00139 706 aaPredicted RBP11.3□□□□□ -0.6
LRRC40-201ENST00000370952 ST5P78524 1137 aa11.3□□□□□ -0.6
LRRC40-201ENST00000370952 GUCY1B3Q02153 619 aa11.3□□□□□ -0.6
LRRC40-201ENST00000370952 FSIP1Q8NA03 581 aa11.3□□□□□ -0.6
LRRC40-201ENST00000370952 IFNKQ9P0W0 207 aa11.3□□□□□ -0.6
LRRC40-201ENST00000370952 DNAI1Q9UI46 699 aa11.3□□□□□ -0.6
LRRC40-201ENST00000370952 SPATA31D1Q6ZQQ2 1576 aa11.29□□□□□ -0.6
LRRC40-201ENST00000370952 FMN2Q9NZ56 1722 aa11.29□□□□□ -0.6
LRRC40-201ENST00000370952 CHGBP05060 677 aa11.29□□□□□ -0.6
LRRC40-201ENST00000370952 ADD1P35611 737 aaKnown RBP11.29□□□□□ -0.6
LRRC40-201ENST00000370952 CCDC93Q567U6 631 aa11.29□□□□□ -0.6
LRRC40-201ENST00000370952 Q6ZUG5 572 aa11.29□□□□□ -0.6
LRRC40-201ENST00000370952 EAF2Q96CJ1 260 aaPredicted RBP11.29□□□□□ -0.6
LRRC40-201ENST00000370952 A2ML1A8K2U0 1454 aa11.29□□□□□ -0.6
LRRC40-201ENST00000370952 CTAGE5O15320 804 aa11.29□□□□□ -0.6
LRRC40-201ENST00000370952 GIGYF1O75420 1035 aaPredicted RBP11.29□□□□□ -0.6
LRRC40-201ENST00000370952 GSDMDP57764 484 aa11.29□□□□□ -0.6
LRRC40-201ENST00000370952 TMCO3Q6UWJ1 677 aa11.29□□□□□ -0.6
LRRC40-201ENST00000370952 UBXN4Q92575 508 aa11.29□□□□□ -0.6
LRRC40-201ENST00000370952 SIL1Q9H173 461 aa11.29□□□□□ -0.6
LRRC40-201ENST00000370952 FEZ2Q9UHY8 353 aaPredicted RBP11.29□□□□□ -0.6
LRRC40-201ENST00000370952 KDRP35968 1356 aa11.28□□□□□ -0.6
LRRC40-201ENST00000370952 IGSF1Q8N6C5 1336 aa11.28□□□□□ -0.6
LRRC40-201ENST00000370952 ME1P48163 572 aa11.28□□□□□ -0.6
LRRC40-201ENST00000370952 OSBPL5Q9H0X9 879 aaPredicted RBP11.28□□□□□ -0.6
LRRC40-201ENST00000370952 C9orf78Q9NZ63 289 aaPredicted RBP11.28□□□□□ -0.6
LRRC40-201ENST00000370952 BIN1O00499 593 aa11.28□□□□□ -0.6
LRRC40-201ENST00000370952 ZRANB2O95218 330 aaKnown RBP eCLIP11.28□□□□□ -0.6
LRRC40-201ENST00000370952 SFPQP23246 707 aaKnown RBP eCLIP11.28□□□□□ -0.6
LRRC40-201ENST00000370952 DPCR1Q3MIW9 517 aa11.28□□□□□ -0.6
LRRC40-201ENST00000370952 USHBP1Q8N6Y0 703 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms