RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 FAM53CQ9NYF3 392 aa16.85■□□□□ 0.29
PHTF1-204ENST00000369604 PNMA6AP0CW24 399 aaPredicted RBP16.84■□□□□ 0.29
PHTF1-204ENST00000369604 ALKQ9UM73 1620 aa16.84■□□□□ 0.29
PHTF1-204ENST00000369604 CTAGE5O15320 804 aa16.84■□□□□ 0.29
PHTF1-204ENST00000369604 TMC6Q7Z403 805 aa16.84■□□□□ 0.29
PHTF1-204ENST00000369604 RPS6KB1P23443 525 aa16.83■□□□□ 0.29
PHTF1-204ENST00000369604 AMPHP49418 695 aa16.83■□□□□ 0.29
PHTF1-204ENST00000369604 CREBRFQ8IUR6 639 aa16.83■□□□□ 0.29
PHTF1-204ENST00000369604 SDF4Q9BRK5 362 aa16.83■□□□□ 0.29
PHTF1-204ENST00000369604 FSD1Q9BTV5 496 aa16.83■□□□□ 0.29
PHTF1-204ENST00000369604 ESF1Q9H501 851 aaKnown RBP16.83■□□□□ 0.29
PHTF1-204ENST00000369604 PA2G4Q9UQ80 394 aaKnown RBP16.83■□□□□ 0.29
PHTF1-204ENST00000369604 NAT10Q9H0A0 1025 aaKnown RBP16.83■□□□□ 0.28
PHTF1-204ENST00000369604 FHOD1Q9Y613 1164 aa16.83■□□□□ 0.28
PHTF1-204ENST00000369604 MAP3K5Q99683 1374 aa16.83■□□□□ 0.28
PHTF1-204ENST00000369604 SFPQP23246 707 aaKnown RBP eCLIP16.83■□□□□ 0.28
PHTF1-204ENST00000369604 TPM4P67936 248 aa16.83■□□□□ 0.28
PHTF1-204ENST00000369604 FAM193AP78312 1265 aa16.83■□□□□ 0.28
PHTF1-204ENST00000369604 FTOQ9C0B1 505 aaKnown RBP eCLIP16.83■□□□□ 0.28
PHTF1-204ENST00000369604 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.83■□□□□ 0.285e-7■■■■□ 25.2
PHTF1-204ENST00000369604 TAF6LQ9Y6J9 622 aa16.83■□□□□ 0.28
PHTF1-204ENST00000369604 H2AFXP16104 143 aaPredicted RBP16.82■□□□□ 0.28
PHTF1-204ENST00000369604 ME1P48163 572 aa16.82■□□□□ 0.28
PHTF1-204ENST00000369604 MAP4K1Q92918 833 aa16.82■□□□□ 0.28
PHTF1-204ENST00000369604 PPP1R13BQ96KQ4 1090 aa16.82■□□□□ 0.28
PHTF1-204ENST00000369604 DNAI1Q9UI46 699 aa16.82■□□□□ 0.28
PHTF1-204ENST00000369604 TTC21BQ7Z4L5 1316 aa16.82■□□□□ 0.28
PHTF1-204ENST00000369604 MLH3Q9UHC1 1453 aa16.82■□□□□ 0.28
PHTF1-204ENST00000369604 ERBB3P21860 1342 aa16.82■□□□□ 0.28
PHTF1-204ENST00000369604 PI4KAP2A4QPH2 592 aa16.81■□□□□ 0.28
PHTF1-204ENST00000369604 GNAT3A8MTJ3 354 aa16.81■□□□□ 0.28
PHTF1-204ENST00000369604 PI4KAP1Q8N8J0 262 aa16.81■□□□□ 0.28
PHTF1-204ENST00000369604 PPFIA3O75145 1194 aa16.81■□□□□ 0.28
PHTF1-204ENST00000369604 TOB2Q14106 344 aaPredicted RBP16.81■□□□□ 0.28
PHTF1-204ENST00000369604 DHX40Q8IX18 779 aaKnown RBP16.81■□□□□ 0.28
PHTF1-204ENST00000369604 TSPYL1Q9H0U9 437 aa16.81■□□□□ 0.28
PHTF1-204ENST00000369604 CCDC8Q9H0W5 538 aaPredicted RBP16.81■□□□□ 0.28
PHTF1-204ENST00000369604 BOLA2Q9H3K6 86 aa16.81■□□□□ 0.28
PHTF1-204ENST00000369604 URI1O94763 535 aaPredicted RBP16.81■□□□□ 0.28
PHTF1-204ENST00000369604 PLA2G4AP47712 749 aa16.81■□□□□ 0.28
PHTF1-204ENST00000369604 RESTQ13127 1097 aa16.81■□□□□ 0.28
PHTF1-204ENST00000369604 E4F1Q66K89 784 aaPredicted RBP16.81■□□□□ 0.28
PHTF1-204ENST00000369604 FSIP1Q8NA03 581 aa16.81■□□□□ 0.28
PHTF1-204ENST00000369604 C9orf78Q9NZ63 289 aaPredicted RBP16.81■□□□□ 0.28
PHTF1-204ENST00000369604 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.81■□□□□ 0.28
PHTF1-204ENST00000369604 TUBGCP6Q96RT7 1819 aa16.8■□□□□ 0.28
PHTF1-204ENST00000369604 TULP2O00295 520 aa16.8■□□□□ 0.28
PHTF1-204ENST00000369604 ANXA1P04083 346 aa16.8■□□□□ 0.28
PHTF1-204ENST00000369604 RAD51AP2Q09MP3 1159 aa16.8■□□□□ 0.28
PHTF1-204ENST00000369604 KCNB2Q92953 911 aa16.8■□□□□ 0.28
PHTF1-204ENST00000369604 HIP1O00291 1037 aa16.8■□□□□ 0.28
PHTF1-204ENST00000369604 GNL2Q13823 731 aaKnown RBP16.8■□□□□ 0.28
PHTF1-204ENST00000369604 ZSCAN16Q9H4T2 348 aaPredicted RBP16.8■□□□□ 0.28
PHTF1-204ENST00000369604 IFNKQ9P0W0 207 aa16.8■□□□□ 0.28
PHTF1-204ENST00000369604 FAM177A1Q8N128 213 aaPredicted RBP16.8■□□□□ 0.28
PHTF1-204ENST00000369604 LRRC2Q9BYS8 371 aa16.8■□□□□ 0.28
PHTF1-204ENST00000369604 A0A0D9SFI3 127 aa16.79■□□□□ 0.28
PHTF1-204ENST00000369604 SEC31AO94979 1220 aaKnown RBP16.79■□□□□ 0.28
PHTF1-204ENST00000369604 GPS2Q13227 327 aa16.79■□□□□ 0.28
PHTF1-204ENST00000369604 KRBA2Q6ZNG9 492 aa16.79■□□□□ 0.28
PHTF1-204ENST00000369604 DNAAF4Q8WXU2 420 aa16.79■□□□□ 0.28
PHTF1-204ENST00000369604 LTV1Q96GA3 475 aaPredicted RBP16.79■□□□□ 0.28
PHTF1-204ENST00000369604 EYA1Q99502 592 aa16.79■□□□□ 0.28
PHTF1-204ENST00000369604 GOLPH3LQ9H4A5 285 aa16.79■□□□□ 0.28
PHTF1-204ENST00000369604 MYO5BQ9ULV0 1848 aa16.79■□□□□ 0.28
PHTF1-204ENST00000369604 L2HGDHQ9H9P8 463 aa16.79■□□□□ 0.28
PHTF1-204ENST00000369604 GUCY1B3Q02153 619 aa16.78■□□□□ 0.28
PHTF1-204ENST00000369604 XPO4Q9C0E2 1151 aaKnown RBP16.78■□□□□ 0.28
PHTF1-204ENST00000369604 FEZ2Q9UHY8 353 aaPredicted RBP16.78■□□□□ 0.28
PHTF1-204ENST00000369604 CCDC150Q8NCX0 1101 aa16.78■□□□□ 0.28
PHTF1-204ENST00000369604 SIL1Q9H173 461 aa16.78■□□□□ 0.28
PHTF1-204ENST00000369604 ZCCHC17Q9NP64 241 aaKnown RBP16.78■□□□□ 0.28
PHTF1-204ENST00000369604 ACEP12821 1306 aa16.78■□□□□ 0.28
PHTF1-204ENST00000369604 BIN1O00499 593 aa16.78■□□□□ 0.28
PHTF1-204ENST00000369604 TXLNBQ8N3L3 684 aa16.78■□□□□ 0.28
PHTF1-204ENST00000369604 SLC20A2Q08357 652 aa16.77■□□□□ 0.28
PHTF1-204ENST00000369604 Q6ZUG5 572 aa16.77■□□□□ 0.28
PHTF1-204ENST00000369604 CCDC34Q96HJ3 373 aa16.77■□□□□ 0.28
PHTF1-204ENST00000369604 CARD6Q9BX69 1037 aa16.76■□□□□ 0.27
PHTF1-204ENST00000369604 IMPACTQ9P2X3 320 aa16.76■□□□□ 0.27
PHTF1-204ENST00000369604 GIGYF1O75420 1035 aaPredicted RBP16.76■□□□□ 0.27
PHTF1-204ENST00000369604 ST5P78524 1137 aa16.76■□□□□ 0.27
PHTF1-204ENST00000369604 FAM160A1Q05DH4 1040 aa16.76■□□□□ 0.27
PHTF1-204ENST00000369604 G3BP1Q13283 466 aaKnown RBP eCLIP16.76■□□□□ 0.27
PHTF1-204ENST00000369604 SF3A1Q15459 793 aaKnown RBP16.76■□□□□ 0.27
PHTF1-204ENST00000369604 ARMCX5Q6P1M9 558 aa16.76■□□□□ 0.27
PHTF1-204ENST00000369604 ERC1Q8IUD2 1116 aa16.76■□□□□ 0.27
PHTF1-204ENST00000369604 IL17REQ8NFR9 667 aa16.76■□□□□ 0.27
PHTF1-204ENST00000369604 USP28Q96RU2 1077 aa16.76■□□□□ 0.27
PHTF1-204ENST00000369604 CHPF2Q9P2E5 772 aa16.76■□□□□ 0.27
PHTF1-204ENST00000369604 ORC3Q9UBD5 711 aaPredicted RBP16.76■□□□□ 0.27
PHTF1-204ENST00000369604 PRR36Q9H6K5 1346 aa16.76■□□□□ 0.27
PHTF1-204ENST00000369604 USP42Q9H9J4 1324 aaKnown RBP16.76■□□□□ 0.27
PHTF1-204ENST00000369604 NBPF11Q86T75 865 aa16.76■□□□□ 0.27
PHTF1-204ENST00000369604 CERS3Q8IU89 383 aa16.76■□□□□ 0.27
PHTF1-204ENST00000369604 NEK1Q96PY6 1258 aa16.76■□□□□ 0.27
PHTF1-204ENST00000369604 CEBPAP49715 358 aaPredicted RBP16.75■□□□□ 0.27
PHTF1-204ENST00000369604 ETF1P62495 437 aaKnown RBP16.75■□□□□ 0.27
PHTF1-204ENST00000369604 OSBPL5Q9H0X9 879 aaPredicted RBP16.75■□□□□ 0.27
PHTF1-204ENST00000369604 EPC1Q9H2F5 836 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms