RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 SUPT20HQ8NEM7 779 aa19.72■□□□□ 0.75
VAMP4-202ENST00000367740 CENPFP49454 3210 aa19.72■□□□□ 0.75
VAMP4-202ENST00000367740 BRCA2P51587 3418 aa19.71■□□□□ 0.75
VAMP4-202ENST00000367740 ANKRD36CQ5JPF3 1778 aa19.71■□□□□ 0.75
VAMP4-202ENST00000367740 ERVV-1B6SEH8 477 aa19.71■□□□□ 0.75
VAMP4-202ENST00000367740 ADM5C9JUS6 153 aa19.71■□□□□ 0.75
VAMP4-202ENST00000367740 U2SURPO15042 1029 aaKnown RBP19.71■□□□□ 0.75
VAMP4-202ENST00000367740 GPTP24298 496 aa19.71■□□□□ 0.75
VAMP4-202ENST00000367740 SUSD4Q5VX71 490 aa19.71■□□□□ 0.75
VAMP4-202ENST00000367740 YDJCA8MPS7 323 aa19.7■□□□□ 0.74
VAMP4-202ENST00000367740 H7C1D1 291 aa19.7■□□□□ 0.74
VAMP4-202ENST00000367740 NTSR2O95665 410 aa19.7■□□□□ 0.74
VAMP4-202ENST00000367740 PKN2Q16513 984 aaKnown RBP19.7■□□□□ 0.74
VAMP4-202ENST00000367740 PHACTR3Q96KR7 559 aa19.7■□□□□ 0.74
VAMP4-202ENST00000367740 LRRC37AA6NMS7 1700 aa19.7■□□□□ 0.74
VAMP4-202ENST00000367740 ABCC4O15439 1325 aa19.7■□□□□ 0.74
VAMP4-202ENST00000367740 MAP3K15Q6ZN16 1313 aa19.7■□□□□ 0.74
VAMP4-202ENST00000367740 EGFRP00533 1210 aa19.69■□□□□ 0.74
VAMP4-202ENST00000367740 HSPA5P11021 654 aaKnown RBP19.69■□□□□ 0.74
VAMP4-202ENST00000367740 DPP8Q6V1X1 898 aaPredicted RBP19.69■□□□□ 0.74
VAMP4-202ENST00000367740 SAMD7Q7Z3H4 446 aa19.69■□□□□ 0.74
VAMP4-202ENST00000367740 TMX4Q9H1E5 349 aaPredicted RBP19.69■□□□□ 0.74
VAMP4-202ENST00000367740 NGEFQ8N5V2 710 aa19.68■□□□□ 0.74
VAMP4-202ENST00000367740 TAF1P21675 1872 aa19.68■□□□□ 0.74
VAMP4-202ENST00000367740 DDX60Q8IY21 1712 aaKnown RBP19.68■□□□□ 0.74
VAMP4-202ENST00000367740 KDM3BQ7LBC6 1761 aa19.67■□□□□ 0.74
VAMP4-202ENST00000367740 TBC1D10BQ4KMP7 808 aaPredicted RBP19.67■□□□□ 0.74
VAMP4-202ENST00000367740 TTLL7Q6ZT98 887 aa19.67■□□□□ 0.74
VAMP4-202ENST00000367740 RASAL3Q86YV0 1011 aa19.67■□□□□ 0.74
VAMP4-202ENST00000367740 ZBTB12Q9Y330 459 aaPredicted RBP19.67■□□□□ 0.74
VAMP4-202ENST00000367740 SZT2Q5T011 3432 aa19.66■□□□□ 0.74
VAMP4-202ENST00000367740 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.74
VAMP4-202ENST00000367740 MCM10Q7L590 875 aa19.66■□□□□ 0.74
VAMP4-202ENST00000367740 MPNDQ8N594 471 aa19.66■□□□□ 0.74
VAMP4-202ENST00000367740 ZNF296Q8WUU4 475 aaPredicted RBP19.66■□□□□ 0.74
VAMP4-202ENST00000367740 DPF2Q92785 391 aa19.66■□□□□ 0.74
VAMP4-202ENST00000367740 RBBP6Q7Z6E9 1792 aaKnown RBP19.65■□□□□ 0.74
VAMP4-202ENST00000367740 FXR1P51114 621 aaKnown RBP eCLIP19.65■□□□□ 0.74
VAMP4-202ENST00000367740 KIF6Q6ZMV9 814 aa19.65■□□□□ 0.74
VAMP4-202ENST00000367740 REM2Q8IYK8 340 aaPredicted RBP19.65■□□□□ 0.74
VAMP4-202ENST00000367740 ZNF34Q8IZ26 560 aa19.65■□□□□ 0.74
VAMP4-202ENST00000367740 ZBTB3Q9H5J0 574 aa19.65■□□□□ 0.74
VAMP4-202ENST00000367740 HDAC9Q9UKV0 1011 aa19.65■□□□□ 0.74
VAMP4-202ENST00000367740 PAPPA2Q9BXP8 1791 aa19.65■□□□□ 0.74
VAMP4-202ENST00000367740 PRKAR2BP31323 418 aa19.64■□□□□ 0.73
VAMP4-202ENST00000367740 SP8Q8IXZ3 490 aa19.64■□□□□ 0.73
VAMP4-202ENST00000367740 DCPSQ96C86 337 aaKnown RBP19.64■□□□□ 0.73
VAMP4-202ENST00000367740 NLRP3Q96P20 1036 aa19.64■□□□□ 0.73
VAMP4-202ENST00000367740 PSMD14O00487 310 aa19.63■□□□□ 0.73
VAMP4-202ENST00000367740 FBXO46Q6PJ61 603 aaPredicted RBP19.63■□□□□ 0.73
VAMP4-202ENST00000367740 RSPH6AQ9H0K4 717 aa19.63■□□□□ 0.73
VAMP4-202ENST00000367740 TBC1D8O95759 1140 aa19.61■□□□□ 0.73
VAMP4-202ENST00000367740 DCTN1Q14203 1278 aa19.61■□□□□ 0.73
VAMP4-202ENST00000367740 CC2D1BQ5T0F9 858 aaKnown RBP19.61■□□□□ 0.73
VAMP4-202ENST00000367740 CDCA5Q96FF9 252 aa19.61■□□□□ 0.73
VAMP4-202ENST00000367740 TIMELESSQ9UNS1 1208 aa19.61■□□□□ 0.73
VAMP4-202ENST00000367740 SCN9AQ15858 1988 aa19.61■□□□□ 0.73
VAMP4-202ENST00000367740 BBOX1O75936 387 aa19.6■□□□□ 0.73
VAMP4-202ENST00000367740 SLC10A5Q5PT55 438 aa19.6■□□□□ 0.73
VAMP4-202ENST00000367740 RBM26Q5T8P6 1007 aaKnown RBP19.6■□□□□ 0.73
VAMP4-202ENST00000367740 GIGYF2Q6Y7W6 1299 aaKnown RBP19.6■□□□□ 0.73
VAMP4-202ENST00000367740 PPP1R42Q7Z4L9 355 aa19.6■□□□□ 0.73
VAMP4-202ENST00000367740 RTF1Q92541 710 aaKnown RBP19.6■□□□□ 0.73
VAMP4-202ENST00000367740 GGA3Q9NZ52 723 aa19.6■□□□□ 0.73
VAMP4-202ENST00000367740 ASTN2O75129 1339 aaPredicted RBP19.59■□□□□ 0.73
VAMP4-202ENST00000367740 MYL6BP14649 208 aa19.59■□□□□ 0.73
VAMP4-202ENST00000367740 SULF1Q8IWU6 871 aa19.59■□□□□ 0.73
VAMP4-202ENST00000367740 RRP7AQ9Y3A4 280 aaKnown RBP19.59■□□□□ 0.73
VAMP4-202ENST00000367740 RTL9Q8NET4 1388 aa19.58■□□□□ 0.73
VAMP4-202ENST00000367740 RPS12P25398 132 aaKnown RBP19.58■□□□□ 0.72
VAMP4-202ENST00000367740 KIF4BQ2VIQ3 1234 aa19.58■□□□□ 0.72
VAMP4-202ENST00000367740 PARP10Q53GL7 1025 aa19.58■□□□□ 0.72
VAMP4-202ENST00000367740 DBNDD1Q9H9R9 158 aa19.58■□□□□ 0.72
VAMP4-202ENST00000367740 DLG5Q8TDM6 1919 aa19.57■□□□□ 0.72
VAMP4-202ENST00000367740 GPR25O00155 361 aa19.57■□□□□ 0.72
VAMP4-202ENST00000367740 PER1O15534 1290 aaPredicted RBP19.57■□□□□ 0.72
VAMP4-202ENST00000367740 NOM1Q5C9Z4 860 aaKnown RBP19.57■□□□□ 0.72
VAMP4-202ENST00000367740 MIS18AQ9NYP9 233 aa19.57■□□□□ 0.72
VAMP4-202ENST00000367740 UTP14AQ9BVJ6 771 aaKnown RBP19.56■□□□□ 0.72
VAMP4-202ENST00000367740 PSME4Q14997 1843 aa19.55■□□□□ 0.72
VAMP4-202ENST00000367740 POTEFA5A3E0 1075 aa19.55■□□□□ 0.72
VAMP4-202ENST00000367740 FKBP1BP68106 108 aa19.55■□□□□ 0.72
VAMP4-202ENST00000367740 GRAPQ13588 217 aa19.55■□□□□ 0.72
VAMP4-202ENST00000367740 TAF7Q15545 349 aaPredicted RBP19.55■□□□□ 0.72
VAMP4-202ENST00000367740 GRAPLQ8TC17 118 aaPredicted RBP19.55■□□□□ 0.72
VAMP4-202ENST00000367740 KCNQ5Q9NR82 932 aa19.55■□□□□ 0.72
VAMP4-202ENST00000367740 COL4A1P02462 1669 aa19.55■□□□□ 0.72
VAMP4-202ENST00000367740 WASHC4Q2M389 1173 aa19.54■□□□□ 0.72
VAMP4-202ENST00000367740 HCLS1P14317 486 aaPredicted RBP19.53■□□□□ 0.72
VAMP4-202ENST00000367740 MOB2Q70IA6 237 aa19.53■□□□□ 0.72
VAMP4-202ENST00000367740 DDX46Q7L014 1031 aaKnown RBP19.53■□□□□ 0.72
VAMP4-202ENST00000367740 HTATSF1O43719 755 aaKnown RBP19.52■□□□□ 0.72
VAMP4-202ENST00000367740 ECE2O60344 883 aa19.52■□□□□ 0.72
VAMP4-202ENST00000367740 TM4SF4P48230 202 aa19.52■□□□□ 0.72
VAMP4-202ENST00000367740 KIAA0100Q14667 2235 aaKnown RBP19.51■□□□□ 0.71
VAMP4-202ENST00000367740 RIMBP2O15034 1052 aa19.51■□□□□ 0.71
VAMP4-202ENST00000367740 FKTNO75072 461 aa19.51■□□□□ 0.71
VAMP4-202ENST00000367740 ANGEL2Q5VTE6 544 aaKnown RBP19.51■□□□□ 0.71
VAMP4-202ENST00000367740 TMC4Q7Z404 712 aa19.51■□□□□ 0.71
VAMP4-202ENST00000367740 EIF4A1P60842 406 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms